Literature DB >> 21836987

2-Hy-droxy-2-(3-oxobutan-2-yl)indan-1,3-dione.

Raza Murad Ghalib, Rokiah Hashim, Sayed Hasan Mehdi, Chin Sing Yeap, Hoong-Kun Fun.   

Abstract

In the indane ring system of the title mol-ecule, C(13)H(12)O(4), the hy-droxy-bearing C atom is 0.134 (1) Å out of the plane of the remaining essentially planar atoms (r.m.s. deviation = 0.010 Å). In the crystal, mol-ecules are linked into chains along the b axis by inter-molecular O-H⋯O hydrogen bonds. Additional stabilization is provided by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21836987      PMCID: PMC3152143          DOI: 10.1107/S1600536811020253

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Fun et al. (2009) ▶. For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶). For ring conformations, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C13H12O4 M = 232.23 Monoclinic, a = 9.5080 (5) Å b = 6.7200 (4) Å c = 17.5195 (9) Å β = 101.044 (1)° V = 1098.66 (10) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.85 × 0.41 × 0.12 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.917, T max = 0.988 13885 measured reflections 3796 independent reflections 3243 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.140 S = 1.04 3796 reflections 160 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.58 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811020253/lh5255sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811020253/lh5255Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811020253/lh5255Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12O4F(000) = 488
Mr = 232.23Dx = 1.404 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6185 reflections
a = 9.5080 (5) Åθ = 2.9–32.0°
b = 6.7200 (4) ŵ = 0.10 mm1
c = 17.5195 (9) ÅT = 100 K
β = 101.044 (1)°Plate, yellow
V = 1098.66 (10) Å30.85 × 0.41 × 0.12 mm
Z = 4
Bruker APEXII DUO CCD area-detector diffractometer3796 independent reflections
Radiation source: fine-focus sealed tube3243 reflections with I > 2σ(I)
graphiteRint = 0.025
φ and ω scansθmax = 32.1°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −14→14
Tmin = 0.917, Tmax = 0.988k = −9→9
13885 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0733P)2 + 0.4363P] where P = (Fo2 + 2Fc2)/3
3796 reflections(Δ/σ)max < 0.001
160 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.24 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.41250 (10)0.29580 (15)0.22992 (5)0.0310 (2)
O20.52668 (8)0.59788 (15)0.12770 (5)0.0277 (2)
O30.25204 (10)0.81871 (14)0.05496 (5)0.0289 (2)
O50.11903 (9)0.36167 (16)0.09212 (5)0.0307 (2)
C10.23418 (11)0.75422 (17)0.18829 (6)0.0200 (2)
C20.15222 (12)0.90944 (19)0.20909 (7)0.0259 (2)
H2A0.12281.01470.17530.031*
C30.11597 (13)0.9011 (2)0.28246 (7)0.0303 (3)
H3A0.06051.00210.29780.036*
C40.16121 (12)0.7441 (2)0.33338 (7)0.0300 (3)
H4A0.13650.74310.38220.036*
C50.24275 (12)0.5891 (2)0.31218 (6)0.0257 (2)
H5A0.27250.48390.34590.031*
C60.27822 (10)0.59662 (17)0.23882 (6)0.0202 (2)
C70.36157 (11)0.45130 (17)0.20197 (6)0.0213 (2)
C80.38181 (10)0.53665 (17)0.12305 (6)0.01995 (19)
C90.28310 (11)0.72095 (17)0.11399 (6)0.0202 (2)
C100.34388 (11)0.40003 (17)0.05236 (6)0.0207 (2)
H10A0.35360.47860.00650.025*
C110.18853 (11)0.33382 (17)0.04139 (6)0.0219 (2)
C120.12393 (14)0.2357 (2)−0.03389 (7)0.0300 (3)
H12A0.02150.2329−0.03930.045*
H12B0.15960.1022−0.03440.045*
H12C0.14930.3092−0.07630.045*
C130.44326 (12)0.22016 (19)0.05498 (7)0.0273 (2)
H13A0.42150.15020.00640.041*
H13B0.42960.13290.09640.041*
H13C0.54100.26450.06390.041*
H1O20.554 (2)0.666 (3)0.1717 (12)0.044 (5)*
U11U22U33U12U13U23
O10.0329 (4)0.0318 (5)0.0278 (4)0.0113 (4)0.0045 (3)0.0083 (4)
O20.0169 (3)0.0390 (5)0.0272 (4)−0.0056 (3)0.0039 (3)−0.0064 (4)
O30.0332 (4)0.0278 (4)0.0256 (4)0.0009 (4)0.0059 (3)0.0069 (3)
O50.0240 (4)0.0371 (5)0.0319 (4)−0.0074 (4)0.0076 (3)−0.0081 (4)
C10.0179 (4)0.0210 (5)0.0206 (4)−0.0004 (3)0.0026 (3)−0.0012 (4)
C20.0239 (5)0.0240 (5)0.0286 (5)0.0030 (4)0.0021 (4)−0.0044 (4)
C30.0238 (5)0.0358 (7)0.0311 (5)0.0033 (5)0.0047 (4)−0.0116 (5)
C40.0228 (5)0.0438 (7)0.0239 (5)−0.0012 (5)0.0061 (4)−0.0068 (5)
C50.0220 (4)0.0351 (6)0.0199 (4)−0.0018 (4)0.0035 (3)0.0008 (4)
C60.0168 (4)0.0238 (5)0.0194 (4)−0.0005 (4)0.0019 (3)0.0000 (4)
C70.0181 (4)0.0238 (5)0.0210 (4)0.0016 (4)0.0013 (3)0.0014 (4)
C80.0163 (4)0.0227 (5)0.0207 (4)0.0000 (4)0.0031 (3)−0.0008 (4)
C90.0191 (4)0.0199 (5)0.0213 (4)−0.0023 (3)0.0031 (3)0.0001 (4)
C100.0196 (4)0.0220 (5)0.0206 (4)0.0000 (4)0.0044 (3)−0.0001 (4)
C110.0203 (4)0.0200 (5)0.0239 (4)0.0011 (4)0.0003 (3)−0.0009 (4)
C120.0292 (5)0.0312 (6)0.0256 (5)0.0000 (5)−0.0046 (4)−0.0044 (5)
C130.0232 (5)0.0265 (6)0.0323 (5)0.0031 (4)0.0057 (4)−0.0021 (4)
O1—C71.2147 (14)C5—H5A0.9300
O2—C81.4249 (12)C6—C71.4815 (15)
O2—H1O20.89 (2)C7—C81.5425 (15)
O3—C91.2129 (13)C8—C101.5283 (15)
O5—C111.2193 (14)C8—C91.5436 (15)
C1—C21.3917 (16)C10—C111.5192 (15)
C1—C61.3924 (15)C10—C131.5294 (16)
C1—C91.4808 (14)C10—H10A0.9800
C2—C31.3941 (17)C11—C121.4969 (15)
C2—H2A0.9300C12—H12A0.9600
C3—C41.395 (2)C12—H12B0.9600
C3—H3A0.9300C12—H12C0.9600
C4—C51.3908 (18)C13—H13A0.9600
C4—H4A0.9300C13—H13B0.9600
C5—C61.3906 (14)C13—H13C0.9600
C8—O2—H1O2108.3 (13)C10—C8—C9110.74 (8)
C2—C1—C6121.25 (10)C7—C8—C9102.29 (8)
C2—C1—C9129.00 (10)O3—C9—C1126.98 (10)
C6—C1—C9109.71 (9)O3—C9—C8124.49 (10)
C1—C2—C3117.45 (11)C1—C9—C8108.53 (9)
C1—C2—H2A121.3C11—C10—C8110.56 (8)
C3—C2—H2A121.3C11—C10—C13110.64 (9)
C2—C3—C4121.30 (11)C8—C10—C13113.70 (9)
C2—C3—H3A119.3C11—C10—H10A107.2
C4—C3—H3A119.3C8—C10—H10A107.2
C5—C4—C3120.98 (11)C13—C10—H10A107.2
C5—C4—H4A119.5O5—C11—C12121.44 (10)
C3—C4—H4A119.5O5—C11—C10120.83 (10)
C6—C5—C4117.77 (11)C12—C11—C10117.73 (10)
C6—C5—H5A121.1C11—C12—H12A109.5
C4—C5—H5A121.1C11—C12—H12B109.5
C5—C6—C1121.24 (10)H12A—C12—H12B109.5
C5—C6—C7128.57 (10)C11—C12—H12C109.5
C1—C6—C7110.18 (9)H12A—C12—H12C109.5
O1—C7—C6126.63 (10)H12B—C12—H12C109.5
O1—C7—C8124.94 (10)C10—C13—H13A109.5
C6—C7—C8108.34 (9)C10—C13—H13B109.5
O2—C8—C10107.17 (8)H13A—C13—H13B109.5
O2—C8—C7109.96 (8)C10—C13—H13C109.5
C10—C8—C7116.90 (9)H13A—C13—H13C109.5
O2—C8—C9109.65 (9)H13B—C13—H13C109.5
C6—C1—C2—C30.02 (17)C2—C1—C9—O3−5.20 (19)
C9—C1—C2—C3177.51 (11)C6—C1—C9—O3172.52 (11)
C1—C2—C3—C40.58 (18)C2—C1—C9—C8175.17 (11)
C2—C3—C4—C5−0.79 (19)C6—C1—C9—C8−7.10 (12)
C3—C4—C5—C60.37 (18)O2—C8—C9—O373.28 (13)
C4—C5—C6—C10.22 (16)C10—C8—C9—O3−44.77 (14)
C4—C5—C6—C7−179.24 (11)C7—C8—C9—O3−170.06 (10)
C2—C1—C6—C5−0.43 (16)O2—C8—C9—C1−107.08 (9)
C9—C1—C6—C5−178.36 (10)C10—C8—C9—C1134.86 (9)
C2—C1—C6—C7179.12 (10)C7—C8—C9—C19.58 (11)
C9—C1—C6—C71.19 (12)O2—C8—C10—C11−177.89 (9)
C5—C6—C7—O11.15 (19)C7—C8—C10—C1158.23 (12)
C1—C6—C7—O1−178.35 (11)C9—C8—C10—C11−58.34 (11)
C5—C6—C7—C8−175.32 (10)O2—C8—C10—C1356.96 (12)
C1—C6—C7—C85.18 (12)C7—C8—C10—C13−66.92 (12)
O1—C7—C8—O2−68.98 (14)C9—C8—C10—C13176.52 (9)
C6—C7—C8—O2107.57 (10)C8—C10—C11—O5−12.09 (15)
O1—C7—C8—C1053.47 (14)C13—C10—C11—O5114.77 (12)
C6—C7—C8—C10−129.99 (9)C8—C10—C11—C12167.27 (10)
O1—C7—C8—C9174.59 (11)C13—C10—C11—C12−65.87 (13)
C6—C7—C8—C9−8.87 (10)
D—H···AD—HH···AD···AD—H···A
O2—H1O2···O1i0.89 (2)1.90 (2)2.7880 (13)171.5 (19)
C12—H12A···O3ii0.962.593.5416 (17)173
C12—H12B···O3iii0.962.523.3215 (16)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H1O2⋯O1i0.89 (2)1.90 (2)2.7880 (13)171.5 (19)
C12—H12A⋯O3ii0.962.593.5416 (17)173
C12—H12B⋯O3iii0.962.523.3215 (16)142

Symmetry codes: (i) ; (ii) ; (iii) .

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