| Literature DB >> 21836987 |
Raza Murad Ghalib, Rokiah Hashim, Sayed Hasan Mehdi, Chin Sing Yeap, Hoong-Kun Fun.
Abstract
In the indane ring system of the title mol-ecule, C(13)H(12)O(4), the hy-droxy-bearing C atom is 0.134 (1) Å out of the plane of the remaining essentially planar atoms (r.m.s. deviation = 0.010 Å). In the crystal, mol-ecules are linked into chains along the b axis by inter-molecular O-H⋯O hydrogen bonds. Additional stabilization is provided by weak inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 21836987 PMCID: PMC3152143 DOI: 10.1107/S1600536811020253
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H12O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6185 reflections |
| θ = 2.9–32.0° | |
| µ = 0.10 mm−1 | |
| β = 101.044 (1)° | Plate, yellow |
| 0.85 × 0.41 × 0.12 mm | |
| Bruker APEXII DUO CCD area-detector diffractometer | 3796 independent reflections |
| Radiation source: fine-focus sealed tube | 3243 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.1°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 13885 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3796 reflections | (Δ/σ)max < 0.001 |
| 160 parameters | Δρmax = 0.58 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.41250 (10) | 0.29580 (15) | 0.22992 (5) | 0.0310 (2) | |
| O2 | 0.52668 (8) | 0.59788 (15) | 0.12770 (5) | 0.0277 (2) | |
| O3 | 0.25204 (10) | 0.81871 (14) | 0.05496 (5) | 0.0289 (2) | |
| O5 | 0.11903 (9) | 0.36167 (16) | 0.09212 (5) | 0.0307 (2) | |
| C1 | 0.23418 (11) | 0.75422 (17) | 0.18829 (6) | 0.0200 (2) | |
| C2 | 0.15222 (12) | 0.90944 (19) | 0.20909 (7) | 0.0259 (2) | |
| H2A | 0.1228 | 1.0147 | 0.1753 | 0.031* | |
| C3 | 0.11597 (13) | 0.9011 (2) | 0.28246 (7) | 0.0303 (3) | |
| H3A | 0.0605 | 1.0021 | 0.2978 | 0.036* | |
| C4 | 0.16121 (12) | 0.7441 (2) | 0.33338 (7) | 0.0300 (3) | |
| H4A | 0.1365 | 0.7431 | 0.3822 | 0.036* | |
| C5 | 0.24275 (12) | 0.5891 (2) | 0.31218 (6) | 0.0257 (2) | |
| H5A | 0.2725 | 0.4839 | 0.3459 | 0.031* | |
| C6 | 0.27822 (10) | 0.59662 (17) | 0.23882 (6) | 0.0202 (2) | |
| C7 | 0.36157 (11) | 0.45130 (17) | 0.20197 (6) | 0.0213 (2) | |
| C8 | 0.38181 (10) | 0.53665 (17) | 0.12305 (6) | 0.01995 (19) | |
| C9 | 0.28310 (11) | 0.72095 (17) | 0.11399 (6) | 0.0202 (2) | |
| C10 | 0.34388 (11) | 0.40003 (17) | 0.05236 (6) | 0.0207 (2) | |
| H10A | 0.3536 | 0.4786 | 0.0065 | 0.025* | |
| C11 | 0.18853 (11) | 0.33382 (17) | 0.04139 (6) | 0.0219 (2) | |
| C12 | 0.12393 (14) | 0.2357 (2) | −0.03389 (7) | 0.0300 (3) | |
| H12A | 0.0215 | 0.2329 | −0.0393 | 0.045* | |
| H12B | 0.1596 | 0.1022 | −0.0344 | 0.045* | |
| H12C | 0.1493 | 0.3092 | −0.0763 | 0.045* | |
| C13 | 0.44326 (12) | 0.22016 (19) | 0.05498 (7) | 0.0273 (2) | |
| H13A | 0.4215 | 0.1502 | 0.0064 | 0.041* | |
| H13B | 0.4296 | 0.1329 | 0.0964 | 0.041* | |
| H13C | 0.5410 | 0.2645 | 0.0639 | 0.041* | |
| H1O2 | 0.554 (2) | 0.666 (3) | 0.1717 (12) | 0.044 (5)* |
| O1 | 0.0329 (4) | 0.0318 (5) | 0.0278 (4) | 0.0113 (4) | 0.0045 (3) | 0.0083 (4) |
| O2 | 0.0169 (3) | 0.0390 (5) | 0.0272 (4) | −0.0056 (3) | 0.0039 (3) | −0.0064 (4) |
| O3 | 0.0332 (4) | 0.0278 (4) | 0.0256 (4) | 0.0009 (4) | 0.0059 (3) | 0.0069 (3) |
| O5 | 0.0240 (4) | 0.0371 (5) | 0.0319 (4) | −0.0074 (4) | 0.0076 (3) | −0.0081 (4) |
| C1 | 0.0179 (4) | 0.0210 (5) | 0.0206 (4) | −0.0004 (3) | 0.0026 (3) | −0.0012 (4) |
| C2 | 0.0239 (5) | 0.0240 (5) | 0.0286 (5) | 0.0030 (4) | 0.0021 (4) | −0.0044 (4) |
| C3 | 0.0238 (5) | 0.0358 (7) | 0.0311 (5) | 0.0033 (5) | 0.0047 (4) | −0.0116 (5) |
| C4 | 0.0228 (5) | 0.0438 (7) | 0.0239 (5) | −0.0012 (5) | 0.0061 (4) | −0.0068 (5) |
| C5 | 0.0220 (4) | 0.0351 (6) | 0.0199 (4) | −0.0018 (4) | 0.0035 (3) | 0.0008 (4) |
| C6 | 0.0168 (4) | 0.0238 (5) | 0.0194 (4) | −0.0005 (4) | 0.0019 (3) | 0.0000 (4) |
| C7 | 0.0181 (4) | 0.0238 (5) | 0.0210 (4) | 0.0016 (4) | 0.0013 (3) | 0.0014 (4) |
| C8 | 0.0163 (4) | 0.0227 (5) | 0.0207 (4) | 0.0000 (4) | 0.0031 (3) | −0.0008 (4) |
| C9 | 0.0191 (4) | 0.0199 (5) | 0.0213 (4) | −0.0023 (3) | 0.0031 (3) | 0.0001 (4) |
| C10 | 0.0196 (4) | 0.0220 (5) | 0.0206 (4) | 0.0000 (4) | 0.0044 (3) | −0.0001 (4) |
| C11 | 0.0203 (4) | 0.0200 (5) | 0.0239 (4) | 0.0011 (4) | 0.0003 (3) | −0.0009 (4) |
| C12 | 0.0292 (5) | 0.0312 (6) | 0.0256 (5) | 0.0000 (5) | −0.0046 (4) | −0.0044 (5) |
| C13 | 0.0232 (5) | 0.0265 (6) | 0.0323 (5) | 0.0031 (4) | 0.0057 (4) | −0.0021 (4) |
| O1—C7 | 1.2147 (14) | C5—H5A | 0.9300 |
| O2—C8 | 1.4249 (12) | C6—C7 | 1.4815 (15) |
| O2—H1O2 | 0.89 (2) | C7—C8 | 1.5425 (15) |
| O3—C9 | 1.2129 (13) | C8—C10 | 1.5283 (15) |
| O5—C11 | 1.2193 (14) | C8—C9 | 1.5436 (15) |
| C1—C2 | 1.3917 (16) | C10—C11 | 1.5192 (15) |
| C1—C6 | 1.3924 (15) | C10—C13 | 1.5294 (16) |
| C1—C9 | 1.4808 (14) | C10—H10A | 0.9800 |
| C2—C3 | 1.3941 (17) | C11—C12 | 1.4969 (15) |
| C2—H2A | 0.9300 | C12—H12A | 0.9600 |
| C3—C4 | 1.395 (2) | C12—H12B | 0.9600 |
| C3—H3A | 0.9300 | C12—H12C | 0.9600 |
| C4—C5 | 1.3908 (18) | C13—H13A | 0.9600 |
| C4—H4A | 0.9300 | C13—H13B | 0.9600 |
| C5—C6 | 1.3906 (14) | C13—H13C | 0.9600 |
| C8—O2—H1O2 | 108.3 (13) | C10—C8—C9 | 110.74 (8) |
| C2—C1—C6 | 121.25 (10) | C7—C8—C9 | 102.29 (8) |
| C2—C1—C9 | 129.00 (10) | O3—C9—C1 | 126.98 (10) |
| C6—C1—C9 | 109.71 (9) | O3—C9—C8 | 124.49 (10) |
| C1—C2—C3 | 117.45 (11) | C1—C9—C8 | 108.53 (9) |
| C1—C2—H2A | 121.3 | C11—C10—C8 | 110.56 (8) |
| C3—C2—H2A | 121.3 | C11—C10—C13 | 110.64 (9) |
| C2—C3—C4 | 121.30 (11) | C8—C10—C13 | 113.70 (9) |
| C2—C3—H3A | 119.3 | C11—C10—H10A | 107.2 |
| C4—C3—H3A | 119.3 | C8—C10—H10A | 107.2 |
| C5—C4—C3 | 120.98 (11) | C13—C10—H10A | 107.2 |
| C5—C4—H4A | 119.5 | O5—C11—C12 | 121.44 (10) |
| C3—C4—H4A | 119.5 | O5—C11—C10 | 120.83 (10) |
| C6—C5—C4 | 117.77 (11) | C12—C11—C10 | 117.73 (10) |
| C6—C5—H5A | 121.1 | C11—C12—H12A | 109.5 |
| C4—C5—H5A | 121.1 | C11—C12—H12B | 109.5 |
| C5—C6—C1 | 121.24 (10) | H12A—C12—H12B | 109.5 |
| C5—C6—C7 | 128.57 (10) | C11—C12—H12C | 109.5 |
| C1—C6—C7 | 110.18 (9) | H12A—C12—H12C | 109.5 |
| O1—C7—C6 | 126.63 (10) | H12B—C12—H12C | 109.5 |
| O1—C7—C8 | 124.94 (10) | C10—C13—H13A | 109.5 |
| C6—C7—C8 | 108.34 (9) | C10—C13—H13B | 109.5 |
| O2—C8—C10 | 107.17 (8) | H13A—C13—H13B | 109.5 |
| O2—C8—C7 | 109.96 (8) | C10—C13—H13C | 109.5 |
| C10—C8—C7 | 116.90 (9) | H13A—C13—H13C | 109.5 |
| O2—C8—C9 | 109.65 (9) | H13B—C13—H13C | 109.5 |
| C6—C1—C2—C3 | 0.02 (17) | C2—C1—C9—O3 | −5.20 (19) |
| C9—C1—C2—C3 | 177.51 (11) | C6—C1—C9—O3 | 172.52 (11) |
| C1—C2—C3—C4 | 0.58 (18) | C2—C1—C9—C8 | 175.17 (11) |
| C2—C3—C4—C5 | −0.79 (19) | C6—C1—C9—C8 | −7.10 (12) |
| C3—C4—C5—C6 | 0.37 (18) | O2—C8—C9—O3 | 73.28 (13) |
| C4—C5—C6—C1 | 0.22 (16) | C10—C8—C9—O3 | −44.77 (14) |
| C4—C5—C6—C7 | −179.24 (11) | C7—C8—C9—O3 | −170.06 (10) |
| C2—C1—C6—C5 | −0.43 (16) | O2—C8—C9—C1 | −107.08 (9) |
| C9—C1—C6—C5 | −178.36 (10) | C10—C8—C9—C1 | 134.86 (9) |
| C2—C1—C6—C7 | 179.12 (10) | C7—C8—C9—C1 | 9.58 (11) |
| C9—C1—C6—C7 | 1.19 (12) | O2—C8—C10—C11 | −177.89 (9) |
| C5—C6—C7—O1 | 1.15 (19) | C7—C8—C10—C11 | 58.23 (12) |
| C1—C6—C7—O1 | −178.35 (11) | C9—C8—C10—C11 | −58.34 (11) |
| C5—C6—C7—C8 | −175.32 (10) | O2—C8—C10—C13 | 56.96 (12) |
| C1—C6—C7—C8 | 5.18 (12) | C7—C8—C10—C13 | −66.92 (12) |
| O1—C7—C8—O2 | −68.98 (14) | C9—C8—C10—C13 | 176.52 (9) |
| C6—C7—C8—O2 | 107.57 (10) | C8—C10—C11—O5 | −12.09 (15) |
| O1—C7—C8—C10 | 53.47 (14) | C13—C10—C11—O5 | 114.77 (12) |
| C6—C7—C8—C10 | −129.99 (9) | C8—C10—C11—C12 | 167.27 (10) |
| O1—C7—C8—C9 | 174.59 (11) | C13—C10—C11—C12 | −65.87 (13) |
| C6—C7—C8—C9 | −8.87 (10) |
| H··· | ||||
| O2—H1O2···O1i | 0.89 (2) | 1.90 (2) | 2.7880 (13) | 171.5 (19) |
| C12—H12A···O3ii | 0.96 | 2.59 | 3.5416 (17) | 173 |
| C12—H12B···O3iii | 0.96 | 2.52 | 3.3215 (16) | 142 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 0.89 (2) | 1.90 (2) | 2.7880 (13) | 171.5 (19) |
| C12—H12 | 0.96 | 2.59 | 3.5416 (17) | 173 |
| C12—H12 | 0.96 | 2.52 | 3.3215 (16) | 142 |
Symmetry codes: (i) ; (ii) ; (iii) .