Literature DB >> 26584443

Stereocontrol within polyketide assembly lines.

Adrian T Keatinge-Clay1.   

Abstract

Most of the stereocenters of polyketide natural products are established during assembly line biosynthesis. The body of knowledge for how stereocenters are set is now large enough to begin constructing physical models of key reactions. Interactions between stereocenter-forming enzymes and polyketide intermediates are examined here at atomic resolution, drawing from the most current structural and functional information of ketosynthases (KSs), ketoreductases (KRs), dehydratases (DHs), enoylreductases (ERs), and related enzymes. While many details remain to be experimentally determined, our understanding of the chemical and physical mechanisms utilized by the chirality-molding enzymes of modular PKSs is rapidly advancing.

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Year:  2016        PMID: 26584443      PMCID: PMC4742408          DOI: 10.1039/c5np00092k

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  50 in total

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2.  Molecular dynamics studies of modular polyketide synthase ketoreductase stereospecificity.

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3.  Evolutionary origins of the multienzyme architecture of giant fungal fatty acid synthase.

Authors:  Habib S T Bukhari; Roman P Jakob; Timm Maier
Journal:  Structure       Date:  2014-11-13       Impact factor: 5.006

4.  Divergent mechanistic routes for the formation of gem-dimethyl groups in the biosynthesis of complex polyketides.

Authors:  Sean Poust; Ryan M Phelan; Kai Deng; Leonard Katz; Christopher J Petzold; Jay D Keasling
Journal:  Angew Chem Int Ed Engl       Date:  2015-01-07       Impact factor: 15.336

5.  The structure of a ketoreductase determines the organization of the beta-carbon processing enzymes of modular polyketide synthases.

Authors:  Adrian T Keatinge-Clay; Robert M Stroud
Journal:  Structure       Date:  2006-03-23       Impact factor: 5.006

6.  Acyl-chain elongation drives ketosynthase substrate selectivity in trans-acyltransferase polyketide synthases.

Authors:  Matthew Jenner; José Pedro Afonso; Hannah R Bailey; Sarah Frank; Annette Kampa; Jörn Piel; Neil J Oldham
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Review 7.  The thiolase superfamily: condensing enzymes with diverse reaction specificities.

Authors:  Antti M Haapalainen; Gitte Meriläinen; Rik K Wierenga
Journal:  Trends Biochem Sci       Date:  2005-12-13       Impact factor: 13.807

8.  Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.

Authors:  Y Modis; R K Wierenga
Journal:  J Mol Biol       Date:  2000-04-14       Impact factor: 5.469

9.  Cofactor-induced conformational rearrangements establish a catalytically competent active site and a proton relay conduit in FabG.

Authors:  Allen C Price; Yong-Mei Zhang; Charles O Rock; Stephen W White
Journal:  Structure       Date:  2004-03       Impact factor: 5.006

10.  Mechanism of the beta-ketoacyl synthase reaction catalyzed by the animal fatty acid synthase.

Authors:  Andrzej Witkowski; Anil K Joshi; Stuart Smith
Journal:  Biochemistry       Date:  2002-09-03       Impact factor: 3.162

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  30 in total

1.  Mechanism and Stereochemistry of Polyketide Chain Elongation and Methyl Group Epimerization in Polyether Biosynthesis.

Authors:  Xinqiang Xie; Ashish Garg; Chaitan Khosla; David E Cane
Journal:  J Am Chem Soc       Date:  2017-02-14       Impact factor: 15.419

2.  Mechanism of intersubunit ketosynthase-dehydratase interaction in polyketide synthases.

Authors:  Matthew Jenner; Simone Kosol; Daniel Griffiths; Panward Prasongpholchai; Lucio Manzi; Andrew S Barrow; John E Moses; Neil J Oldham; Józef R Lewandowski; Gregory L Challis
Journal:  Nat Chem Biol       Date:  2018-01-08       Impact factor: 15.040

Review 3.  The Uncommon Enzymology of Cis-Acyltransferase Assembly Lines.

Authors:  Adrian T Keatinge-Clay
Journal:  Chem Rev       Date:  2017-04-10       Impact factor: 60.622

4.  Structural and Functional Trends in Dehydrating Bimodules from trans-Acyltransferase Polyketide Synthases.

Authors:  Drew T Wagner; Jia Zeng; Constance B Bailey; Darren C Gay; Fang Yuan; Hannah R Manion; Adrian T Keatinge-Clay
Journal:  Structure       Date:  2017-06-15       Impact factor: 5.006

Review 5.  Engineering modular polyketide synthases for production of biofuels and industrial chemicals.

Authors:  Wenlong Cai; Wenjun Zhang
Journal:  Curr Opin Biotechnol       Date:  2017-09-22       Impact factor: 9.740

6.  Synthetic biology of polyketide synthases.

Authors:  Satoshi Yuzawa; Tyler W H Backman; Jay D Keasling; Leonard Katz
Journal:  J Ind Microbiol Biotechnol       Date:  2018-02-09       Impact factor: 3.346

7.  Ketoreductase Domain Dysfunction Expands Chemodiversity: Malyngamide Biosynthesis in the Cyanobacterium Okeania hirsuta.

Authors:  Nathan A Moss; Tiago Leão; Michael R Rankin; Tyler M McCullough; Pingping Qu; Anton Korobeynikov; Janet L Smith; Lena Gerwick; William H Gerwick
Journal:  ACS Chem Biol       Date:  2018-12-03       Impact factor: 5.100

8.  Structural Basis of Polyketide Synthase O-Methylation.

Authors:  Meredith A Skiba; Marissa M Bivins; John R Schultz; Steffen M Bernard; William D Fiers; Qingyun Dan; Sarang Kulkarni; Peter Wipf; William H Gerwick; David H Sherman; Courtney C Aldrich; Janet L Smith
Journal:  ACS Chem Biol       Date:  2018-12-03       Impact factor: 5.100

9.  Harnessing Thin-Film Continuous-Flow Assembly Lines.

Authors:  Joshua Britton; Jared W Castle; Gregory A Weiss; Colin L Raston
Journal:  Chemistry       Date:  2016-06-22       Impact factor: 5.236

10.  Rapid protein immobilization for thin film continuous flow biocatalysis.

Authors:  Joshua Britton; Colin L Raston; Gregory A Weiss
Journal:  Chem Commun (Camb)       Date:  2016-08-09       Impact factor: 6.222

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