Literature DB >> 28394118

The Uncommon Enzymology of Cis-Acyltransferase Assembly Lines.

Adrian T Keatinge-Clay1.   

Abstract

The enzymology of 135 assembly lines containing primarily cis-acyltransferase modules is comprehensively analyzed, with greater attention paid to less common phenomena. Diverse online transformations, in which the substrate and/or product of the reaction is an acyl chain bound to an acyl carrier protein, are classified so that unusual reactions can be compared and underlying assembly-line logic can emerge. As a complement to the chemistry surrounding the loading, extension, and offloading of assembly lines that construct primarily polyketide products, structural aspects of the assembly-line machinery itself are considered. This review of assembly-line phenomena, covering the literature up to 2017, should thus be informative to the modular polyketide synthase novice and expert alike.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28394118      PMCID: PMC6459028          DOI: 10.1021/acs.chemrev.6b00683

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  248 in total

1.  Organization of the biosynthetic gene cluster for the polyketide anthelmintic macrolide avermectin in Streptomyces avermitilis.

Authors:  H Ikeda; T Nonomiya; M Usami; T Ohta; S Omura
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Metabolic diversity in myxobacteria: identification of the myxalamid and the stigmatellin biosynthetic gene cluster of Stigmatella aurantiaca Sg a15 and a combined polyketide-(poly)peptide gene cluster from the epothilone producing strain Sorangium cellulosum So ce90.

Authors:  S Beyer; B Kunze; B Silakowski; R Müller
Journal:  Biochim Biophys Acta       Date:  1999-05-14

3.  The biosynthetic gene cluster for the 26-membered ring polyene macrolide pimaricin. A new polyketide synthase organization encoded by two subclusters separated by functionalization genes.

Authors:  J F Aparicio; A J Colina; E Ceballos; J F Martín
Journal:  J Biol Chem       Date:  1999-04-09       Impact factor: 5.157

4.  Cloning and analysis of the spinosad biosynthetic gene cluster of Saccharopolyspora spinosa.

Authors:  C Waldron; P Matsushima; P R Rosteck; M C Broughton; J Turner; K Madduri; K P Crawford; D J Merlo; R H Baltz
Journal:  Chem Biol       Date:  2001-05

5.  Isolation and characterization of the epothilone biosynthetic gene cluster from Sorangium cellulosum.

Authors:  B Julien; S Shah; R Ziermann; R Goldman; L Katz; C Khosla
Journal:  Gene       Date:  2000-05-16       Impact factor: 3.688

6.  Biosynthesis of the polyene antifungal antibiotic nystatin in Streptomyces noursei ATCC 11455: analysis of the gene cluster and deduction of the biosynthetic pathway.

Authors:  T Brautaset; O N Sekurova; H Sletta; T E Ellingsen; A R StrŁm; S Valla; S B Zotchev
Journal:  Chem Biol       Date:  2000-06

7.  Amphotericin biosynthesis in Streptomyces nodosus: deductions from analysis of polyketide synthase and late genes.

Authors:  P Caffrey; S Lynch; E Flood; S Finnan; M Oliynyk
Journal:  Chem Biol       Date:  2001-07

8.  The biosynthetic gene cluster for the microtubule-stabilizing agents epothilones A and B from Sorangium cellulosum So ce90.

Authors:  I Molnár; T Schupp; M Ono; R Zirkle; M Milnamow; B Nowak-Thompson; N Engel; C Toupet; A Stratmann; D D Cyr; J Gorlach; J M Mayo; A Hu; S Goff; J Schmid; J M Ligon
Journal:  Chem Biol       Date:  2000-02

9.  The FK520 gene cluster of Streptomyces hygroscopicus var. ascomyceticus (ATCC 14891) contains genes for biosynthesis of unusual polyketide extender units.

Authors:  K Wu; L Chung; W P Revill; L Katz; C D Reeves
Journal:  Gene       Date:  2000-06-13       Impact factor: 3.688

10.  Conversion of a beta-ketoacyl synthase to a malonyl decarboxylase by replacement of the active-site cysteine with glutamine.

Authors:  A Witkowski; A K Joshi; Y Lindqvist; S Smith
Journal:  Biochemistry       Date:  1999-09-07       Impact factor: 3.162

View more
  29 in total

1.  Employing 25-Residue Docking Motifs from Modular Polyketide Synthases as Orthogonal Protein Connectors.

Authors:  Jessica L Meinke; Anna J Simon; Drew T Wagner; Barrett R Morrow; Shaochen You; Andrew D Ellington; Adrian T Keatinge-Clay
Journal:  ACS Synth Biol       Date:  2019-09-12       Impact factor: 5.110

2.  Structural and Functional Trends in Dehydrating Bimodules from trans-Acyltransferase Polyketide Synthases.

Authors:  Drew T Wagner; Jia Zeng; Constance B Bailey; Darren C Gay; Fang Yuan; Hannah R Manion; Adrian T Keatinge-Clay
Journal:  Structure       Date:  2017-06-15       Impact factor: 5.006

3.  Synthetic biology of polyketide synthases.

Authors:  Satoshi Yuzawa; Tyler W H Backman; Jay D Keasling; Leonard Katz
Journal:  J Ind Microbiol Biotechnol       Date:  2018-02-09       Impact factor: 3.346

4.  The modules of trans-acyltransferase assembly lines redefined with a central acyl carrier protein.

Authors:  Drew A Vander Wood; Adrian T Keatinge-Clay
Journal:  Proteins       Date:  2018-03-25

5.  A Mononuclear Iron-Dependent Methyltransferase Catalyzes Initial Steps in Assembly of the Apratoxin A Polyketide Starter Unit.

Authors:  Meredith A Skiba; Andrew P Sikkema; Nathan A Moss; Collin L Tran; Rebecca M Sturgis; Lena Gerwick; William H Gerwick; David H Sherman; Janet L Smith
Journal:  ACS Chem Biol       Date:  2017-11-14       Impact factor: 5.100

6.  Chemistry of a Unique Polyketide-like Synthase.

Authors:  Stephanie W Chun; Meagan E Hinze; Meredith A Skiba; Alison R H Narayan
Journal:  J Am Chem Soc       Date:  2018-02-08       Impact factor: 15.419

7.  PKS-NRPS Enzymology and Structural Biology: Considerations in Protein Production.

Authors:  Meredith A Skiba; Finn P Maloney; Qingyun Dan; Amy E Fraley; Courtney C Aldrich; Janet L Smith; W Clay Brown
Journal:  Methods Enzymol       Date:  2018-03-16       Impact factor: 1.600

8.  Structural and Functional Studies of a Pyran Synthase Domain from a trans-Acyltransferase Assembly Line.

Authors:  Drew T Wagner; Zhicheng Zhang; Roy A Meoded; Alexis J Cepeda; Jörn Piel; Adrian T Keatinge-Clay
Journal:  ACS Chem Biol       Date:  2018-03-01       Impact factor: 5.100

9.  General chemoenzymatic route to two-stereocenter triketides employing assembly line ketoreductases.

Authors:  Zhicheng Zhang; Alexis J Cepeda; Mireya L Robles; Melissa Hirsch; Kaan Kumru; Jina A Zhou; Adrian T Keatinge-Clay
Journal:  Chem Commun (Camb)       Date:  2019-12-17       Impact factor: 6.222

10.  Structural and Functional Studies of a gem-Dimethylating Methyltransferase from a trans-Acyltransferase Assembly Line.

Authors:  Jessica L Meinke; M Rachel Mehaffey; Drew T Wagner; Ningze Sun; Zhicheng Zhang; Jennifer S Brodbelt; Adrian T Keatinge-Clay
Journal:  ACS Chem Biol       Date:  2018-11-09       Impact factor: 5.100

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.