Literature DB >> 26580059

Extension of the Universal Force Field to Metal-Organic Frameworks.

Matthew A Addicoat1, Nina Vankova1, Ismot Farjana Akter1, Thomas Heine1.   

Abstract

The Universal Force Field (UFF) (Rappé et al., J. Am. Chem. Soc. 1992) provides a general approach to molecular mechanics for molecules and materials composed of elements throughout the periodic table. Though the method is tunable by the specification of bond orders and the introduction of effective charges, the presently available list of atom types is insufficient to treat various systems containing transition metals, including metal-organic frameworks (MOFs). As MOFs are composite materials built of a combination of individually stable building blocks, a plethora of MOF structures are possible, and the prediction of their structure with a low-cost method is important. We have extended the UFF parameter set to include transition metal elements Zn, Cu, Ni, Co, Fe, Mn, Cr, V, Ti, Sc, and Al, as they occur in MOFs, and have proposed additional O parameters that provide reliable structures of the metal oxide clusters of the connectors. We have benchmarked the performance of the MOF extension to UFF (UFF4MOF) with respect to experimentally available data and to DFT calculations. The parameters are available in various well-spread programs, including GULP, deMonNano, and ADF, and all information is provided to include them in other molecular mechanics codes.

Entities:  

Year:  2014        PMID: 26580059     DOI: 10.1021/ct400952t

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  25 in total

1.  The role of molecular modelling and simulation in the discovery and deployment of metal-organic frameworks for gas storage and separation.

Authors:  Arni Sturluson; Melanie T Huynh; Alec R Kaija; Caleb Laird; Sunghyun Yoon; Feier Hou; Zhenxing Feng; Christopher E Wilmer; Yamil J Colón; Yongchul G Chung; Daniel W Siderius; Cory M Simon
Journal:  Mol Simul       Date:  2019       Impact factor: 2.178

2.  A collection of forcefield precursors for metal-organic frameworks.

Authors:  Taoyi Chen; Thomas A Manz
Journal:  RSC Adv       Date:  2019-11-13       Impact factor: 4.036

3.  Exploring the Impact of the Linker Length on Heat Transport in Metal-Organic Frameworks.

Authors:  Sandro Wieser; Tomas Kamencek; Rochus Schmid; Natalia Bedoya-Martínez; Egbert Zojer
Journal:  Nanomaterials (Basel)       Date:  2022-06-22       Impact factor: 5.719

4.  Binding free energies in the SAMPL6 octa-acid host-guest challenge calculated with MM and QM methods.

Authors:  Octav Caldararu; Martin A Olsson; Majda Misini Ignjatović; Meiting Wang; Ulf Ryde
Journal:  J Comput Aided Mol Des       Date:  2018-09-10       Impact factor: 3.686

5.  Transferable Force Field for Metal-Organic Frameworks from First-Principles: BTW-FF.

Authors:  Jessica K Bristow; Davide Tiana; Aron Walsh
Journal:  J Chem Theory Comput       Date:  2014-08-27       Impact factor: 6.006

6.  Flexible Force Field Parameterization through Fitting on the Ab Initio-Derived Elastic Tensor.

Authors:  Jurn Heinen; Nicholas C Burtch; Krista S Walton; David Dubbeldam
Journal:  J Chem Theory Comput       Date:  2017-07-19       Impact factor: 6.006

7.  Polarizable Force Fields for CO2 and CH4 Adsorption in M-MOF-74.

Authors:  Tim M Becker; Jurn Heinen; David Dubbeldam; Li-Chiang Lin; Thijs J H Vlugt
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2017-01-31       Impact factor: 4.126

8.  Molecular modeling of zinc paddlewheel molecular complexes and the pores of a flexible metal organic framework.

Authors:  Khalid A H Alzahrani; Robert J Deeth
Journal:  J Mol Model       Date:  2016-03-15       Impact factor: 1.810

9.  Multiple-component covalent organic frameworks.

Authors:  Ning Huang; Lipeng Zhai; Damien E Coupry; Matthew A Addicoat; Keiko Okushita; Katsuyuki Nishimura; Thomas Heine; Donglin Jiang
Journal:  Nat Commun       Date:  2016-07-27       Impact factor: 14.919

Review 10.  Computational Design of Functionalized Metal-Organic Framework Nodes for Catalysis.

Authors:  Varinia Bernales; Manuel A Ortuño; Donald G Truhlar; Christopher J Cramer; Laura Gagliardi
Journal:  ACS Cent Sci       Date:  2017-12-21       Impact factor: 14.553

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