| Literature DB >> 26580029 |
Luca Maragliano1, Benoît Roux1,2, Eric Vanden-Eijnden3.
Abstract
The original formulation of the string method in collective variable space is compared with a recent variant called string method with swarms-of-trajectories. The assumptions made in the original method are revisited and the significance of the minimum free energy path (MFEP) is discussed in the context of reactive events. These assumptions are compared to those made in the string method with swarms-of-trajectories, and shown to be equivalent in a certain regime: in particular an expression for the path identified by the swarms-of-trajectories method is given and shown to be closely related to the MFEP. Finally, the algorithmic aspects of both methods are compared.Entities:
Year: 2014 PMID: 26580029 PMCID: PMC6980172 DOI: 10.1021/ct400606c
Source DB: PubMed Journal: J Chem Theory Comput ISSN: 1549-9618 Impact factor: 6.006