Literature DB >> 26555770

New Tricks for Old Proteins: Single Mutations in a Nonenzymatic Protein Give Rise to Various Enzymatic Activities.

Yurii S Moroz1, Tiffany T Dunston1, Olga V Makhlynets1, Olesia V Moroz1, Yibing Wu2, Jennifer H Yoon1, Alissa B Olsen1, Jaclyn M McLaughlin1, Korrie L Mack1, Pallavi M Gosavi1, Nico A J van Nuland3, Ivan V Korendovych1.   

Abstract

Design of a new catalytic function in proteins, apart from its inherent practical value, is important for fundamental understanding of enzymatic activity. Using a computationally inexpensive, minimalistic approach that focuses on introducing a single highly reactive residue into proteins to achieve catalysis we converted a 74-residue-long C-terminal domain of calmodulin into an efficient esterase. The catalytic efficiency of the resulting stereoselective, allosterically regulated catalyst, nicknamed AlleyCatE, is higher than that of any previously reported de novo designed esterases. The simplicity of our design protocol should complement and expand the capabilities of current state-of-art approaches to protein design. These results show that even a small nonenzymatic protein can efficiently attain catalytic activities in various reactions (Kemp elimination, ester hydrolysis, retroaldol reaction) as a result of a single mutation. In other words, proteins can be just one mutation away from becoming entry points for subsequent evolution.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26555770     DOI: 10.1021/jacs.5b07812

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

1.  Incorporating an allosteric regulatory site in an antibody through backbone design.

Authors:  Olga Khersonsky; Sarel J Fleishman
Journal:  Protein Sci       Date:  2017-03-06       Impact factor: 6.725

Review 2.  Rational and Semirational Protein Design.

Authors:  Ivan V Korendovych
Journal:  Methods Mol Biol       Date:  2018

Review 3.  Conformational dynamics and enzyme evolution.

Authors:  Dušan Petrović; Valeria A Risso; Shina Caroline Lynn Kamerlin; Jose M Sanchez-Ruiz
Journal:  J R Soc Interface       Date:  2018-07       Impact factor: 4.118

4.  Enzyme design: Functional Frankensteins.

Authors:  Olga V Makhlynets; Ivan V Korendovych
Journal:  Nat Chem       Date:  2016-08-24       Impact factor: 24.427

5.  Installing hydrolytic activity into a completely de novo protein framework.

Authors:  Antony J Burton; Andrew R Thomson; William M Dawson; R Leo Brady; Derek N Woolfson
Journal:  Nat Chem       Date:  2016-07-04       Impact factor: 24.427

6.  A de novo enzyme catalyzes a life-sustaining reaction in Escherichia coli.

Authors:  Ann E Donnelly; Grant S Murphy; Katherine M Digianantonio; Michael H Hecht
Journal:  Nat Chem Biol       Date:  2018-01-15       Impact factor: 15.040

Review 7.  Catalytic peptide assemblies.

Authors:  O Zozulia; M A Dolan; I V Korendovych
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

8.  A Designed Enzyme Promotes Selective Post-translational Acylation.

Authors:  Pallavi M Gosavi; Megha Jayachandran; Joel J L Rempillo; Oleksii Zozulia; Olga V Makhlynets; Ivan V Korendovych
Journal:  Chembiochem       Date:  2018-06-21       Impact factor: 3.164

9.  Minimalist de novo Design of Protein Catalysts.

Authors:  Liam R Marshall; Oleksii Zozulia; Zsofia Lengyel-Zhand; Ivan V Korendovych
Journal:  ACS Catal       Date:  2019-09-13       Impact factor: 13.084

10.  Biocatalysts Based on Peptide and Peptide Conjugate Nanostructures.

Authors:  Ian W Hamley
Journal:  Biomacromolecules       Date:  2021-04-12       Impact factor: 6.988

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.