Literature DB >> 26517394

Organization and Dynamics of Receptor Proteins in a Plasma Membrane.

Heidi Koldsø1, Mark S P Sansom1.   

Abstract

The interactions of membrane proteins are influenced by their lipid environment, with key lipid species able to regulate membrane protein function. Advances in high-resolution microscopy can reveal the organization and dynamics of proteins and lipids within living cells at resolutions <200 nm. Parallel advances in molecular simulations provide near-atomic-resolution models of the dynamics of the organization of membranes of in vivo-like complexity. We explore the dynamics of proteins and lipids in crowded and complex plasma membrane models, thereby closing the gap in length and complexity between computations and experiments. Our simulations provide insights into the mutual interplay between lipids and proteins in determining mesoscale (20-100 nm) fluctuations of the bilayer, and in enabling oligomerization and clustering of membrane proteins.

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Year:  2015        PMID: 26517394      PMCID: PMC5591644          DOI: 10.1021/jacs.5b08048

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  71 in total

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4.  Structure of a class C GPCR metabotropic glutamate receptor 1 bound to an allosteric modulator.

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Journal:  Science       Date:  2014-03-06       Impact factor: 47.728

5.  Protein area occupancy at the center of the red blood cell membrane.

Authors:  Allison D Dupuy; Donald M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-19       Impact factor: 11.205

6.  Cholesterol increases kinetic, energetic, and mechanical stability of the human β2-adrenergic receptor.

Authors:  Michael Zocher; Cheng Zhang; Søren G F Rasmussen; Brian K Kobilka; Daniel J Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-14       Impact factor: 11.205

7.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

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Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

8.  The juxtamembrane regions of human receptor tyrosine kinases exhibit conserved interaction sites with anionic lipids.

Authors:  George Hedger; Mark S P Sansom; Heidi Koldsø
Journal:  Sci Rep       Date:  2015-03-17       Impact factor: 4.379

9.  PIP(2)-binding site in Kir channels: definition by multiscale biomolecular simulations.

Authors:  Phillip J Stansfeld; Richard Hopkinson; Frances M Ashcroft; Mark S P Sansom
Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

10.  Multiscale simulations reveal conserved patterns of lipid interactions with aquaporins.

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Journal:  Structure       Date:  2013-04-18       Impact factor: 5.871

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  38 in total

1.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

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Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

2.  Membrane curvature regulates ligand-specific membrane sorting of GPCRs in living cells.

Authors:  Kadla R Rosholm; Natascha Leijnse; Anna Mantsiou; Vadym Tkach; Søren L Pedersen; Volker F Wirth; Lene B Oddershede; Knud J Jensen; Karen L Martinez; Nikos S Hatzakis; Poul Martin Bendix; Andrew Callan-Jones; Dimitrios Stamou
Journal:  Nat Chem Biol       Date:  2017-05-08       Impact factor: 15.040

3.  Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation.

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Journal:  Chem Rev       Date:  2019-04-12       Impact factor: 60.622

Review 4.  Whole-Cell Models and Simulations in Molecular Detail.

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Journal:  Annu Rev Cell Dev Biol       Date:  2019-07-12       Impact factor: 13.827

5.  Biophysics of membrane curvature remodeling at molecular and mesoscopic lengthscales.

Authors:  N Ramakrishnan; Ryan P Bradley; Richard W Tourdot; Ravi Radhakrishnan
Journal:  J Phys Condens Matter       Date:  2018-05-22       Impact factor: 2.333

6.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
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Review 7.  Lipid interaction sites on channels, transporters and receptors: Recent insights from molecular dynamics simulations.

Authors:  George Hedger; Mark S P Sansom
Journal:  Biochim Biophys Acta       Date:  2016-03-03

Review 8.  'Crystal' Clear? Lysophospholipid Receptor Structure Insights and Controversies.

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9.  Membrane Compartmentalization Reducing the Mobility of Lipids and Proteins within a Model Plasma Membrane.

Authors:  Heidi Koldsø; Tyler Reddy; Philip W Fowler; Anna L Duncan; Mark S P Sansom
Journal:  J Phys Chem B       Date:  2016-08-16       Impact factor: 2.991

10.  Addressing the Excessive Aggregation of Membrane Proteins in the MARTINI Model.

Authors:  Ayan Majumder; John E Straub
Journal:  J Chem Theory Comput       Date:  2021-03-15       Impact factor: 6.006

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