Literature DB >> 26498192

The circadian system as an organizer of metabolism.

Jennifer M Hurley1, Jennifer J Loros2, Jay C Dunlap3.   

Abstract

The regulation of metabolism by circadian systems is believed to be a key reason for the extensive representation of circadian rhythms within the tree of life. Despite this, surprisingly little work has focused on the link between metabolism and the clock in Neurospora, a key model system in circadian research. The analysis that has been performed has focused on the unidirectional control from the clock to metabolism and largely ignored the feedback from metabolism on the clock. Recent efforts to understand these links have broken new ground, revealing bidirectional control from the clock to metabolism and vise-versa, showing just how strongly interconnected these two cellular systems can be in fungi. This review describes both well understood and emerging links between the clock and metabolic output of fungi as well as the role that metabolism plays in influencing the rhythm set by the clock.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Circadian; Clock-controlled genes; Metabolism; Neurospora; Output

Mesh:

Substances:

Year:  2015        PMID: 26498192      PMCID: PMC4818683          DOI: 10.1016/j.fgb.2015.10.002

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  51 in total

1.  Resetting the sporulation rhythm in Pilobolus with short light flashes of high intensity.

Authors:  V G BRUCE; F WEIGHT; C S PITTENDRIGH
Journal:  Science       Date:  1960-03-11       Impact factor: 47.728

2.  The adaptive value of circadian clocks: an experimental assessment in cyanobacteria.

Authors:  Mark A Woelfle; Yan Ouyang; Kittiporn Phanvijhitsiri; Carl Hirschie Johnson
Journal:  Curr Biol       Date:  2004-08-24       Impact factor: 10.834

3.  Analysis of expressed sequence tags from two starvation, time-of-day-specific libraries of Neurospora crassa reveals novel clock-controlled genes.

Authors:  H Zhu; M Nowrousian; D Kupfer; H V Colot; G Berrocal-Tito; H Lai; D Bell-Pedersen; B A Roe; J J Loros; J C Dunlap
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

4.  A circadian oscillator in Aspergillus spp. regulates daily development and gene expression.

Authors:  Andrew V Greene; Nancy Keller; Hubertus Haas; Deborah Bell-Pedersen
Journal:  Eukaryot Cell       Date:  2003-04

5.  sn-1,2-diacylglycerol levels in the fungus Neurospora crassa display circadian rhythmicity.

Authors:  M Ramsdale; P L Lakin-Thomas
Journal:  J Biol Chem       Date:  2000-09-08       Impact factor: 5.157

6.  The genome sequence of the filamentous fungus Neurospora crassa.

Authors:  James E Galagan; Sarah E Calvo; Katherine A Borkovich; Eric U Selker; Nick D Read; David Jaffe; William FitzHugh; Li-Jun Ma; Serge Smirnov; Seth Purcell; Bushra Rehman; Timothy Elkins; Reinhard Engels; Shunguang Wang; Cydney B Nielsen; Jonathan Butler; Matthew Endrizzi; Dayong Qui; Peter Ianakiev; Deborah Bell-Pedersen; Mary Anne Nelson; Margaret Werner-Washburne; Claude P Selitrennikoff; John A Kinsey; Edward L Braun; Alex Zelter; Ulrich Schulte; Gregory O Kothe; Gregory Jedd; Werner Mewes; Chuck Staben; Edward Marcotte; David Greenberg; Alice Roy; Karen Foley; Jerome Naylor; Nicole Stange-Thomann; Robert Barrett; Sante Gnerre; Michael Kamal; Manolis Kamvysselis; Evan Mauceli; Cord Bielke; Stephen Rudd; Dmitrij Frishman; Svetlana Krystofova; Carolyn Rasmussen; Robert L Metzenberg; David D Perkins; Scott Kroken; Carlo Cogoni; Giuseppe Macino; David Catcheside; Weixi Li; Robert J Pratt; Stephen A Osmani; Colin P C DeSouza; Louise Glass; Marc J Orbach; J Andrew Berglund; Rodger Voelker; Oded Yarden; Michael Plamann; Stephan Seiler; Jay Dunlap; Alan Radford; Rodolfo Aramayo; Donald O Natvig; Lisa A Alex; Gertrud Mannhaupt; Daniel J Ebbole; Michael Freitag; Ian Paulsen; Matthew S Sachs; Eric S Lander; Chad Nusbaum; Bruce Birren
Journal:  Nature       Date:  2003-04-24       Impact factor: 49.962

7.  Regulation of the Neurospora circadian clock by an RNA helicase.

Authors:  Ping Cheng; Qun He; Qiyang He; Lixin Wang; Yi Liu
Journal:  Genes Dev       Date:  2004-12-29       Impact factor: 11.361

8.  Multiple oscillators regulate circadian gene expression in Neurospora.

Authors:  Alejandro Correa; Zachary A Lewis; Andrew V Greene; Irene J March; Richard H Gomer; Deborah Bell-Pedersen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-03       Impact factor: 11.205

9.  Nrg1 and nrg2 transcriptional repressors are differently regulated in response to carbon source.

Authors:  Cristin D Berkey; Valmik K Vyas; Marian Carlson
Journal:  Eukaryot Cell       Date:  2004-04

10.  The frequency gene is required for temperature-dependent regulation of many clock-controlled genes in Neurospora crassa.

Authors:  Minou Nowrousian; Giles E Duffield; Jennifer J Loros; Jay C Dunlap
Journal:  Genetics       Date:  2003-07       Impact factor: 4.562

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  15 in total

Review 1.  Holobiont chronobiology: mycorrhiza may be a key to linking aboveground and underground rhythms.

Authors:  Soon-Jae Lee; David Morse; Mohamed Hijri
Journal:  Mycorrhiza       Date:  2019-06-12       Impact factor: 3.387

Review 2.  Circadian rhythmicity of body temperature and metabolism.

Authors:  Roberto Refinetti
Journal:  Temperature (Austin)       Date:  2020-04-17

Review 3.  The molecular basis of metabolic cycles and their relationship to circadian rhythms.

Authors:  Jane Mellor
Journal:  Nat Struct Mol Biol       Date:  2016-12-06       Impact factor: 15.369

Review 4.  Making Time: Conservation of Biological Clocks from Fungi to Animals.

Authors:  Jay C Dunlap; Jennifer J Loros
Journal:  Microbiol Spectr       Date:  2017-05

5.  Circadian oscillations in Trichoderma atroviride and the role of core clock components in secondary metabolism, development, and mycoparasitism against the phytopathogen Botrytis cinerea.

Authors:  Marlene Henríquez-Urrutia; Rebecca Spanner; Consuelo Olivares-Yánez; Aldo Seguel-Avello; Rodrigo Pérez-Lara; Hector Guillén-Alonso; Robert Winkler; Alfredo Herrera-Estrella; Paulo Canessa; Luis F Larrondo
Journal:  Elife       Date:  2022-08-11       Impact factor: 8.713

6.  The small G protein RAS2 is involved in the metabolic compensation of the circadian clock in the circadian model Neurospora crassa.

Authors:  Norbert Gyöngyösi; Anita Szőke; Krisztina Ella; Krisztina Káldi
Journal:  J Biol Chem       Date:  2017-07-20       Impact factor: 5.157

7.  Expression of putative circadian clock components in the arbuscular mycorrhizal fungus Rhizoglomus irregulare.

Authors:  Soon-Jae Lee; Mengxuan Kong; David Morse; Mohamed Hijri
Journal:  Mycorrhiza       Date:  2018-06-21       Impact factor: 3.387

Review 8.  Regulators of plant biomass degradation in ascomycetous fungi.

Authors:  Tiziano Benocci; Maria Victoria Aguilar-Pontes; Miaomiao Zhou; Bernhard Seiboth; Ronald P de Vries
Journal:  Biotechnol Biofuels       Date:  2017-06-12       Impact factor: 6.040

9.  Spontaneous circadian rhythms in a cold-adapted natural isolate of Aureobasidium pullulans.

Authors:  Diana L Franco; Paulo Canessa; Nicolás Bellora; Sebastián Risau-Gusman; Consuelo Olivares-Yañez; Rodrigo Pérez-Lara; Diego Libkind; Luis F Larrondo; Luciano Marpegan
Journal:  Sci Rep       Date:  2017-10-23       Impact factor: 4.379

Review 10.  Regulation of plant cell wall degradation by light in Trichoderma.

Authors:  Monika Schmoll
Journal:  Fungal Biol Biotechnol       Date:  2018-04-24
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