Literature DB >> 26477320

Identifying the Minimal Enzymes Required for Biosynthesis of Epoxyketone Proteasome Inhibitors.

Joyce Liu1, Xuejun Zhu2, Wenjun Zhang3,4.   

Abstract

Epoxyketone proteasome inhibitors have attracted much interest due to their potential as anticancer drugs. Although the biosynthetic gene clusters for several peptidyl epoxyketone natural products have recently been identified, the enzymatic logic involved in the formation of the terminal epoxyketone pharmacophore has been relatively unexplored. Here, we report the identification of the minimal set of enzymes from the eponemycin gene cluster necessary for the biosynthesis of novel metabolites containing a terminal epoxyketone pharmacophore in Escherichia coli, a versatile and fast-growing heterologous host. This set of enzymes includes a non-ribosomal peptide synthetase (NRPS), a polyketide synthase (PKS), and an acyl-CoA dehydrogenase (ACAD) homologue. In addition to the in vivo functional reconstitution of these enzymes in E. coli, in vitro studies of the eponemycin NRPS and (13) C-labeled precursor feeding experiments were performed to advance the mechanistic understanding of terminal epoxyketone formation.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  acyl-CoA dehydrogenase; biosynthesis; epoxyketones; peptide/polyketide hybrid; proteasome inhibitor

Mesh:

Substances:

Year:  2015        PMID: 26477320      PMCID: PMC4715529          DOI: 10.1002/cbic.201500496

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  26 in total

1.  Multiplexed metagenome mining using short DNA sequence tags facilitates targeted discovery of epoxyketone proteasome inhibitors.

Authors:  Jeremy G Owen; Zachary Charlop-Powers; Alexandra G Smith; Melinda A Ternei; Paula Y Calle; Boojala Vijay B Reddy; Daniel Montiel; Sean F Brady
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

2.  Biosynthesis of complex polyketides in a metabolically engineered strain of E. coli.

Authors:  B A Pfeifer; S J Admiraal; H Gramajo; D E Cane; C Khosla
Journal:  Science       Date:  2001-03-02       Impact factor: 47.728

3.  Substrate activation by acyl-CoA dehydrogenases: transition-state stabilization and pKs of involved functional groups.

Authors:  P Vock; S Engst; M Eder; S Ghisla
Journal:  Biochemistry       Date:  1998-02-17       Impact factor: 3.162

4.  Biosynthesis of antimycins with a reconstituted 3-formamidosalicylate pharmacophore in Escherichia coli.

Authors:  Joyce Liu; Xuejun Zhu; Ryan F Seipke; Wenjun Zhang
Journal:  ACS Synth Biol       Date:  2014-10-07       Impact factor: 5.110

5.  In vitro chemoenzymatic and in vivo biocatalytic syntheses of new beauvericin analogues.

Authors:  Diana Matthes; Lennart Richter; Jane Müller; Alexander Denisiuk; Sven C Feifel; Yuquan Xu; Patricia Espinosa-Artiles; Roderich D Süssmuth; István Molnár
Journal:  Chem Commun (Camb)       Date:  2012-05-01       Impact factor: 6.222

6.  Engineered biosynthesis of bacterial aromatic polyketides in Escherichia coli.

Authors:  Wenjun Zhang; Yanran Li; Yi Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

Review 7.  Acyl-CoA dehydrogenases. A mechanistic overview.

Authors:  Sandro Ghisla; Colin Thorpe
Journal:  Eur J Biochem       Date:  2004-02

8.  Epoxomicin, a new antitumor agent of microbial origin.

Authors:  M Hanada; K Sugawara; K Kaneta; S Toda; Y Nishiyama; K Tomita; H Yamamoto; M Konishi; T Oki
Journal:  J Antibiot (Tokyo)       Date:  1992-11       Impact factor: 2.649

9.  Genetic basis for the biosynthesis of the pharmaceutically important class of epoxyketone proteasome inhibitors.

Authors:  Michelle Schorn; Judith Zettler; Joseph P Noel; Pieter C Dorrestein; Bradley S Moore; Leonard Kaysser
Journal:  ACS Chem Biol       Date:  2013-11-08       Impact factor: 5.100

10.  Fatty acid synthesis in Escherichia coli and its applications towards the production of fatty acid based biofuels.

Authors:  Helge Jans Janßen; Alexander Steinbüchel
Journal:  Biotechnol Biofuels       Date:  2014-01-09       Impact factor: 6.040

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2.  Production of Epoxyketone Peptide-Based Proteasome Inhibitors by Streptomyces sp. BRA-346: Regulation and Biosynthesis.

Authors:  Bruna Domingues Vieira; Henrique Niero; Rafael de Felício; Luiz Fernando Giolo Alves; Cristina Freitas Bazzano; Renata Sigrist; Luciana Costa Furtado; Gabriela Felix Persinoti; Leticia Veras Costa-Lotufo; Daniela Barretto Barbosa Trivella
Journal:  Front Microbiol       Date:  2022-03-24       Impact factor: 5.640

3.  Warhead biosynthesis and the origin of structural diversity in hydroxamate metalloproteinase inhibitors.

Authors:  Franziska Leipoldt; Javier Santos-Aberturas; Dennis P Stegmann; Felix Wolf; Andreas Kulik; Rodney Lacret; Désirée Popadić; Daniela Keinhörster; Norbert Kirchner; Paulina Bekiesch; Harald Gross; Andrew W Truman; Leonard Kaysser
Journal:  Nat Commun       Date:  2017-12-06       Impact factor: 17.694

  3 in total

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