| Literature DB >> 26473065 |
Abstract
BACKGROUND: Despite all advances in neurological sciences, there are unknown aspects in the epidemiology of multiple sclerosis (MS). Based on this hypothesis, the enterotoxigenic strains of Staphylococcus aureus (S. aureus) are possible risk factors for exacerbations of MS.Entities:
Keywords: Antibiotic Resistance; Enterotoxins; Iran; Multiple Sclerosis; Staphylococcus aureus
Year: 2015 PMID: 26473065 PMCID: PMC4601249 DOI: 10.5812/ircmj.12596
Source DB: PubMed Journal: Iran Red Crescent Med J ISSN: 2074-1804 Impact factor: 0.611
The Oligonucleotide Primers and the Polymerase Chain Reaction Programs Used for Amplification of Enterotoxins of Staphylococcus aureus Isolates of Nasal Swabs [a,b]
| Target Gene | Primer Sequence (5’ – 3’) | PCR Product, bp | Annealing Temperature, °C |
|---|---|---|---|
|
| 120 | 50 | |
| F | TTGGAAACGGTTAAAACGAA | ||
| R | GAACCTTCCCATCAAAAACA | ||
|
| 478 | 50 | |
| F | TCGCATCAAACTGACAAACG | ||
| R | GCAGGTACTCTATAAGTGCC | ||
|
| 257 | 50 | |
| F | GACATAAAAGCTAGGAATTT | ||
| R | AAATCGGATTAACATTATCC | ||
|
| 317 | 50 | |
| F | CTAGTTTGGTAATATCTCCT | ||
| R | TAATGCTATATCTTATAGGG | ||
|
| 209 | 50 | |
| F | AGGTTTTTTCACAGGTCATCC | ||
| R | CTTTTTTTTCTTCGGTCAATC | ||
|
| 287 | 55 | |
| F | AAGTAGACATTTTTGGCGTTCC | ||
| R | AGAACCATCAAACTCGTATAGC | ||
|
| 213 | 46.4 | |
| F | GTCTATATGGAGGTACAACACT | ||
| R | GACCTTTACTTATTTCGCTGTC | ||
|
| 454 | 50 | |
| F | GGTGATATTGGTGTAGGTAAC | ||
| R | ATCCATATTCTTTGCCTTTACCAG | ||
|
| 142 | 50 | |
| F | CATCAGAACTGTTGTTCCGCTAG | ||
| R | CTGAATTTTACCATCAAAGGTAC |
a PCR programs: one cycle at 94°C, for 5 minutes; 30 cycles at 94°C for 2 minutes, 72°C for 1 minute and one cycle at 72°C, for 5 minutes.
b PCR volume, 50 μL: 5 μL PCR buffer, 10X 1.5 mM Mgcl2, 200 μM dNTP (Fermentas), 0.5 μM of each primers F (forward) and R (reverse), 1.25 U Taq DNA polymerase (Fermentas), 2.5 μL DNA template.
Distribution of Staphylococcus aureus in Various Studied Groups
| Studied Groups of Patients | No. Samples Collected | No. of Positive Samples [ |
|---|---|---|
|
| 80 | 19 (23.75) |
|
| 60 | 30 (50) |
|
| 60 | 41 (68.33) |
|
| 200 | 90 (45) |
a Values are presented as No. (%).
Distribution of Enterotoxigenic Genes of Staphylococcus aureus in Various Studied Groups [a]
| Studied Groups of Patients | No. of Positive Samples |
|
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|---|
|
| 19 | 1 (5.26) | 1 (5.26) | 1 (5.26) | - | - | - | - | - | - |
|
| 30 | 4 (13.33) | 3 (10) | 3 (10) | 1 (3.33) | - | - | - | - | - |
|
| 41 | 22 (53.65) | 6 (14.63) | 10 (24.39) | 3 (7.31) | - | 1 (2.43) | - | 1 (2.43) | - |
|
| 90 | 27 (30) | 10 (11.11) | 14 (15.55) | 4 (4.44) | - | 1 (1.11) | - | 1 (1.11) | - |
a Values are presented as No. (%).
Figure 1.Results of the Gel Electrophoresis for Identification of Enterotoxigenic Genes in Staphylococcus aureus Strains
M: 100 bp DNA ladder (Fermentas, Vilnius, Latvia), lines 1 - 4: positive samples for sed (317 bp), seb (478 bp), sea (120 bp) and sec (257 bp), lines 5 - 8: positive controls and line 9: negative control.
Figure 4.Results of the Gel Electrophoresis for Identification of Enterotoxigenic Genes in Staphylococcus aureus Strains
M: 100 bp DNA ladder (Fermentas, Vilnius, Latvia), lines 1: positive samples for seg (287 bp), line 2: positive controls and Line 3: negative control.
Antibiotic Resistance Pattern of Staphylococcus aureus Isolated From Various Studied Groups [a,b]
| Type of Samples | No. of Positive Samples | AM10 | Gen10 | Amk30 | Imp30 | Met30 | Tet30 | VAN | Cip5 | Nor | Cotr | Clin | TM/SuL | Pen10 | Ox | Em15 | Az15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| 19 | 10 (52.63) | 6 (31.57) | 5 (26.31) | 1 (5.26) | 8 (42.10) | 12 (63.15) | 2 (10.52) | 5 (26.31) | 3 (15.78) | 8 (42.10) | 4 (21.05) | 9 (47.36) | 4 (21.05) | 8 (42.10) | 8 (42.10) | 3 (15.78) |
|
| 30 | 20 (66.66) | 12 (40) | 10 (33.33) | 3 (10) | 17 (56.66) | 22 (73.33) | 5 (16.66) | 8 (26.66) | 7 (23.33) | 13 (43.33) | 8 (26.66) | 15 (50) | 9 (30) | 15 (50) | 16 (53.33) | 9 (30) |
|
| 41 | 35 (85.36) | 29 (70.73) | 24 (58.53) | 9 (21.95) | 35 (85.36) | 38 (92.68) | 8 (19.51) | 12 (29.26) | 12 (29.26) | 29 (70.73) | 15 (36.58) | 31 (75.60) | 25 (60.97) | 30 (73.17) | 36 (87.80) | 18 (43.90) |
|
| 90 | 65 (72.22) | 47 (52.22) | 39 (43.33) | 13 (14.44) | 60 (66.66) | 72 (80) | 15 (16.66) | 25 (27.77) | 22 (24.44) | 50 (55.55) | 27 (30) | 55 (61.11) | 38 (42.22) | 57 (63.33) | 60 (66.66) | 30 (33.33) |
a In this table AM10 = ampicillin (10 u/disk), Gen10 = gentamycin (10 μg/disk), Amk30 = amikacin (30 u/disk), Imp30 = imipenem (30 u/disk), Met30 = methicillin (30 μg/disk), Tet30 = tetracycline (30 μg/disk), VAN = vancomycin (5 μg/disk), Cip5 = ciprofloxacin (5 μg/disk), Nor = norfloxacin (30 μg/disk), Cotr = cotrimoxazole (30 μg/disk), Clin = clindamycin (2 μg/disk), TM/Sul = trimethoprim-sulfamethoxazole (25 μg/disk), Pen10 = penicillin G (10 u/disk), Ox = oxacillin (1 μg/disk), Em15 = erythromycin (15 μg/disk) and Az15 = azithromycin (15 μg/disk).
b Values are presented as No. (%).