Literature DB >> 26459441

Integrated, DC voltage-driven nucleic acid diagnostic platform for real sample analysis: Detection of oral cancer.

Zdenek Slouka1, Satyajyoti Senapati2, Sunny Shah2, Robin Lawler2, Zonggao Shi3, M Sharon Stack3, Hsueh-Chia Chang4.   

Abstract

We present an integrated and low-cost microfluidic platform capable of extraction of nucleic acids from real biological samples. We demonstrate the application of this platform in pathogen detection and cancer screening. The integrated platform consists of three units including a pretreatment unit for separation of nucleic acids from lysates, a preconcentration unit for concentration of isolated nucleic acids and a sensing unit localized at a designated position on the chip for specific detection of the target nucleic acid. The platform is based on various electrokinetic phenomena exhibited by ion exchange membranes in a DC electrical field that allow them to serve as molecular filters, analyte preconcentrators and sensors. In this manuscript, we describe each unit of the integrated chip separately and show specific detection of a microRNA (miRNA 146a) biomarker associated with oral cancer as a proof-of-concept experiment. This platform technology can easily be extended to other targets of interest by optimizing the properties of the ion exchange membranes and the specific probes functionalized onto the sensors.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Electrokinetics; Integrated platform technology; Ion exchange membranes; Oral cancer; Point-of-care diagnostics; Sample-to-answer detection

Mesh:

Substances:

Year:  2015        PMID: 26459441      PMCID: PMC4607926          DOI: 10.1016/j.talanta.2015.04.083

Source DB:  PubMed          Journal:  Talanta        ISSN: 0039-9140            Impact factor:   6.057


  40 in total

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Journal:  Lab Chip       Date:  2010-01-12       Impact factor: 6.799

2.  Fully integrated lab-on-a-disc for simultaneous analysis of biochemistry and immunoassay from whole blood.

Authors:  Beom Seok Lee; Yang Ui Lee; Han-Sang Kim; Tae-Hyeong Kim; Jiwoon Park; Jeong-Gun Lee; Jintae Kim; Hanshin Kim; Wee Gyo Lee; Yoon-Kyoung Cho
Journal:  Lab Chip       Date:  2010-11-01       Impact factor: 6.799

3.  Diagnostics for the developing world: microfluidic paper-based analytical devices.

Authors:  Andres W Martinez; Scott T Phillips; George M Whitesides; Emanuel Carrilho
Journal:  Anal Chem       Date:  2010-01-01       Impact factor: 6.986

Review 4.  Microfluidic lab-on-a-chip platforms: requirements, characteristics and applications.

Authors:  Daniel Mark; Stefan Haeberle; Günter Roth; Felix von Stetten; Roland Zengerle
Journal:  Chem Soc Rev       Date:  2010-01-25       Impact factor: 54.564

5.  Direct and sensitive detection of foodborne pathogens within fresh produce samples using a field-deployable handheld device.

Authors:  David J You; Kenneth J Geshell; Jeong-Yeol Yoon
Journal:  Biosens Bioelectron       Date:  2011-08-02       Impact factor: 10.618

Review 6.  Diagnosing infections--current and anticipated technologies for point-of-care diagnostics and home-based testing.

Authors:  L Bissonnette; M G Bergeron
Journal:  Clin Microbiol Infect       Date:  2010-08       Impact factor: 8.067

7.  Genetic analysis of H1N1 influenza virus from throat swab samples in a microfluidic system for point-of-care diagnostics.

Authors:  B Scott Ferguson; Steven F Buchsbaum; Ting-Ting Wu; Kuangwen Hsieh; Yi Xiao; Ren Sun; H Tom Soh
Journal:  J Am Chem Soc       Date:  2011-05-24       Impact factor: 15.419

8.  An integrated, self-contained microfluidic cassette for isolation, amplification, and detection of nucleic acids.

Authors:  Dafeng Chen; Michael Mauk; Xianbo Qiu; Changchun Liu; Jitae Kim; Sudhir Ramprasad; Serge Ongagna; William R Abrams; Daniel Malamud; Paul L A M Corstjens; Haim H Bau
Journal:  Biomed Microdevices       Date:  2010-08       Impact factor: 2.838

9.  Microdevices integrating affinity columns and capillary electrophoresis for multibiomarker analysis in human serum.

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Journal:  Lab Chip       Date:  2010-07-28       Impact factor: 6.799

Review 10.  How many child deaths can we prevent this year?

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  12 in total

1.  Microfluidic approaches for cell-based molecular diagnosis.

Authors:  Dong Jun Lee; John Mai; Tony Jun Huang
Journal:  Biomicrofluidics       Date:  2018-09-14       Impact factor: 2.800

2.  Rapid and multi-cycle smFISH enabled by microfluidic ion concentration polarization for in-situ profiling of tissue-specific gene expression in whole C. elegans.

Authors:  Gongchen Sun; Jason Wan; Hang Lu
Journal:  Biomicrofluidics       Date:  2019-11-01       Impact factor: 2.800

3.  Effect of channel geometry on ion-concentration polarization-based preconcentration and desalination.

Authors:  Petr Kovář; David Tichý; Zdeněk Slouka
Journal:  Biomicrofluidics       Date:  2019-11-01       Impact factor: 2.800

4.  Increasing local density and purity of molecules/bacteria on a sensing surface from diluted blood using 3D hybrid electrokinetics.

Authors:  I-Fang Cheng; Tzu-Ying Chen; Wen-Cheng Chao
Journal:  Biomicrofluidics       Date:  2016-06-08       Impact factor: 2.800

Review 5.  Future microfluidic and nanofluidic modular platforms for nucleic acid liquid biopsy in precision medicine.

Authors:  Ana Egatz-Gomez; Ceming Wang; Flora Klacsmann; Zehao Pan; Steve Marczak; Yunshan Wang; Gongchen Sun; Satyajyoti Senapati; Hsueh-Chia Chang
Journal:  Biomicrofluidics       Date:  2016-05-05       Impact factor: 2.800

Review 6.  Electrokinetic ion transport in nanofluidics and membranes with applications in bioanalysis and beyond.

Authors:  Li-Jing Cheng
Journal:  Biomicrofluidics       Date:  2018-04-12       Impact factor: 2.800

7.  A numerical study of the selectivity of an isolated cylindrical or conical nanopore to a charged macro-ion.

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Journal:  Biomicrofluidics       Date:  2019-10-01       Impact factor: 2.800

8.  High-flux ionic diodes, ionic transistors and ionic amplifiers based on external ion concentration polarization by an ion exchange membrane: a new scalable ionic circuit platform.

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Journal:  Lab Chip       Date:  2016-04-07       Impact factor: 6.799

9.  A multiplexed ion-exchange membrane-based miRNA (MIX·miR) detection platform for rapid diagnosis of myocardial infarction.

Authors:  Xiang Ren; Bradley W Ellis; George Ronan; Stuart Ryan Blood; Cameron DeShetler; Satyajyoti Senapati; Keith L March; Eileen Handberg; David Anderson; Carl Pepine; Hsueh-Chia Chang; Pinar Zorlutuna
Journal:  Lab Chip       Date:  2021-10-12       Impact factor: 7.517

Review 10.  Current Technologies and Recent Developments for Screening of HPV-Associated Cervical and Oropharyngeal Cancers.

Authors:  Sunny S Shah; Satyajyoti Senapati; Flora Klacsmann; Daniel L Miller; Jeff J Johnson; Hsueh-Chia Chang; M Sharon Stack
Journal:  Cancers (Basel)       Date:  2016-09-09       Impact factor: 6.639

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