Literature DB >> 26456684

Maximal Expression of the Evolutionarily Conserved Slit2 Gene Promoter Requires Sp1.

Jacquelyn Saunders1, D Roonalika Wisidagama1, Travis Morford1, Cindy S Malone2.   

Abstract

Slit2 is a neural axon guidance and chemorepellent protein that stimulates motility in a variety of cell types. The role of Slit2 in neural development and neoplastic growth and migration has been well established, while the genetic mechanisms underlying regulation of the Slit2 gene have not. We identified the core and proximal promoter of Slit2 by mapping multiple transcriptional start sites, analyzing transcriptional activity, and confirming sequence homology for the Slit2 proximal promoter among a number of species. Deletion series and transient transfection identified the Slit2 proximal promoter as within 399 base pairs upstream of the start of transcription. A crucial region for full expression of the Slit2 proximal promoter lies between 399 base pairs and 296 base pairs upstream of the start of transcription. Computer modeling identified three transcription factor-binding consensus sites within this region, of which only site-directed mutagenesis of one of the two identified Sp1 consensus sites inhibited transcriptional activity of the Slit2 proximal promoter (-399 to +253). Bioinformatics analysis of the Slit2 proximal promoter -399 base pair to -296 base pair region shows high sequence conservation over twenty-two species, and that this region follows an expected pattern of sequence divergence through evolution.

Entities:  

Keywords:  Evolution; Phylogenetics; Promoter; Slit2; Transcription

Mesh:

Substances:

Year:  2015        PMID: 26456684      PMCID: PMC4828330          DOI: 10.1007/s10571-015-0281-8

Source DB:  PubMed          Journal:  Cell Mol Neurobiol        ISSN: 0272-4340            Impact factor:   5.046


  61 in total

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Journal:  Nucleic Acids Res       Date:  1998-02-01       Impact factor: 16.971

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Authors:  Ashraf Dallol; Dietmar Krex; Luke Hesson; Charis Eng; Eamonn R Maher; Farida Latif
Journal:  Oncogene       Date:  2003-07-17       Impact factor: 9.867

9.  Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters.

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Journal:  PLoS Comput Biol       Date:  2006-05-26       Impact factor: 4.475

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2.  Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle.

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3.  Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle.

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