Literature DB >> 26453934

Sensitive cells: enabling tools for static and dynamic control of microbial metabolic pathways.

Brady F Cress1, Emmanouil A Trantas2, Filippos Ververidis2, Robert J Linhardt3, Mattheos Ag Koffas4.   

Abstract

Natural metabolic pathways are dynamically regulated at the transcriptional, translational, and protein levels. Despite this, traditional pathway engineering has relied on static control strategies to engender changes in metabolism, most likely due to ease of implementation and perceived predictability of design outcome. Increasingly in recent years, however, metabolic engineers have drawn inspiration from natural systems and have begun to harness dynamically controlled regulatory machinery to improve design of engineered microorganisms for production of specialty and commodity chemicals. Here, we review recent enabling technologies for engineering static control over pathway expression levels, and we discuss state-of-the-art dynamic control strategies that have yielded improved outcomes in the field of microbial metabolic engineering. Furthermore, we emphasize design of a novel class of genetically encoded controllers that will facilitate automatic, transient tuning of synthetic and endogenous pathways.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26453934     DOI: 10.1016/j.copbio.2015.09.007

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  19 in total

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3.  Methods for the Development of Recombinant Microorganisms for the Production of Natural Products.

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4.  Design of a programmable biosensor-CRISPRi genetic circuits for dynamic and autonomous dual-control of metabolic flux in Bacillus subtilis.

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Authors:  Eric VanArsdale; Juliana Pitzer; Sally Wang; Kristina Stephens; Chen-Yu Chen; Gregory F Payne; William E Bentley
Journal:  ACS Synth Biol       Date:  2022-02-03       Impact factor: 5.249

6.  Sort-Seq Approach to Engineering a Formaldehyde-Inducible Promoter for Dynamically Regulated Escherichia coli Growth on Methanol.

Authors:  Julia Rohlhill; Nicholas R Sandoval; Eleftherios T Papoutsakis
Journal:  ACS Synth Biol       Date:  2017-05-09       Impact factor: 5.110

Review 7.  Recent Advances in the Recombinant Biosynthesis of Polyphenols.

Authors:  Sonam Chouhan; Kanika Sharma; Jian Zha; Sanjay Guleria; Mattheos A G Koffas
Journal:  Front Microbiol       Date:  2017-11-16       Impact factor: 5.640

Review 8.  Whole-cell biocatalysts by design.

Authors:  Baixue Lin; Yong Tao
Journal:  Microb Cell Fact       Date:  2017-06-13       Impact factor: 5.328

9.  Rapid generation of CRISPR/dCas9-regulated, orthogonally repressible hybrid T7-lac promoters for modular, tuneable control of metabolic pathway fluxes in Escherichia coli.

Authors:  Brady F Cress; J Andrew Jones; Daniel C Kim; Quentin D Leitz; Jacob A Englaender; Shannon M Collins; Robert J Linhardt; Mattheos A G Koffas
Journal:  Nucleic Acids Res       Date:  2016-04-13       Impact factor: 16.971

Review 10.  Engineered heparins as new anticoagulant drugs.

Authors:  Deepika Vaidyanathan; Asher Williams; Jonathan S Dordick; Mattheos A G Koffas; Robert J Linhardt
Journal:  Bioeng Transl Med       Date:  2016-11-21
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