Literature DB >> 26420710

Multiparameter Phenotyping of Human PBMCs Using Mass Cytometry.

Michael D Leipold1, Evan W Newell2, Holden T Maecker3.   

Abstract

The standard for single-cell analysis of phenotype and function in recent decades has been fluorescence flow cytometry. Mass cytometry is a newer technology that uses heavy metal ions, rather than fluorochromes, as labels for probes such as antibodies. The binding of these ion-labeled probes to cells is quantitated by mass spectrometry. This greatly increases the number of phenotypic and functional markers that can be probed simultaneously. Here, we review topics that must be considered when adapting existing flow cytometry panels to mass cytometry analysis. We present a protocol and representative panels for surface phenotyping and intracellular cytokine staining (ICS) assays.

Entities:  

Keywords:  CyTOF; Immunophenotyping; Mass cytometry; Panel design

Mesh:

Substances:

Year:  2015        PMID: 26420710      PMCID: PMC4748856          DOI: 10.1007/978-1-4939-2963-4_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

Review 1.  Selecting fluorochrome conjugates for maximum sensitivity.

Authors:  Holden T Maecker; Tom Frey; Laurel E Nomura; Joe Trotter
Journal:  Cytometry A       Date:  2004-12       Impact factor: 4.355

Review 2.  Frequency determination of rare populations by flow cytometry: a hematopoietic stem cell perspective.

Authors:  Alexandra Rundberg Nilsson; David Bryder; Cornelis J H Pronk
Journal:  Cytometry A       Date:  2013-07-09       Impact factor: 4.355

3.  Mass cytometry: protocol for daily tuning and running cell samples on a CyTOF mass cytometer.

Authors:  Michael D Leipold; Holden T Maecker
Journal:  J Vis Exp       Date:  2012-11-02       Impact factor: 1.355

4.  Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes.

Authors:  Evan W Newell; Natalia Sigal; Sean C Bendall; Garry P Nolan; Mark M Davis
Journal:  Immunity       Date:  2012-01-27       Impact factor: 31.745

Review 5.  Highly multiparametric analysis by mass cytometry.

Authors:  Olga Ornatsky; Dmitry Bandura; Vladimir Baranov; Mark Nitz; Mitchell A Winnik; Scott Tanner
Journal:  J Immunol Methods       Date:  2010-07-21       Impact factor: 2.303

6.  Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum.

Authors:  Sean C Bendall; Erin F Simonds; Peng Qiu; El-ad D Amir; Peter O Krutzik; Rachel Finck; Robert V Bruggner; Rachel Melamed; Angelica Trejo; Olga I Ornatsky; Robert S Balderas; Sylvia K Plevritis; Karen Sachs; Dana Pe'er; Scott D Tanner; Garry P Nolan
Journal:  Science       Date:  2011-05-06       Impact factor: 47.728

7.  Single-cell mass cytometry adapted to measurements of the cell cycle.

Authors:  Gregory K Behbehani; Sean C Bendall; Matthew R Clutter; Wendy J Fantl; Garry P Nolan
Journal:  Cytometry A       Date:  2012-06-12       Impact factor: 4.355

8.  Mass cytometry: technique for real time single cell multitarget immunoassay based on inductively coupled plasma time-of-flight mass spectrometry.

Authors:  Dmitry R Bandura; Vladimir I Baranov; Olga I Ornatsky; Alexei Antonov; Robert Kinach; Xudong Lou; Serguei Pavlov; Sergey Vorobiev; John E Dick; Scott D Tanner
Journal:  Anal Chem       Date:  2009-08-15       Impact factor: 6.986

9.  Multiparameter flow cytometry monitoring of T cell responses.

Authors:  Holden T Maecker
Journal:  Methods Mol Biol       Date:  2009

10.  A platinum-based covalent viability reagent for single-cell mass cytometry.

Authors:  Harris G Fienberg; Erin F Simonds; Wendy J Fantl; Garry P Nolan; Bernd Bodenmiller
Journal:  Cytometry A       Date:  2012-05-10       Impact factor: 4.355

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  38 in total

1.  The H-Y Antigen in Embryonic Stem Cells Causes Rejection in Syngeneic Female Recipients.

Authors:  Xiaomeng Hu; Simon T Kueppers; Nigel G Kooreman; Alessia Gravina; Dong Wang; Grigol Tediashvili; Stephan Schlickeiser; Marco Frentsch; Christos Nikolaou; Andreas Thiel; Sivan Marcus; Sigrid Fuchs; Joachim Velden; Hermann Reichenspurner; Hans-Dieter Volk; Tobias Deuse; Sonja Schrepfer
Journal:  Stem Cells Dev       Date:  2020-08-25       Impact factor: 3.272

2.  High-Throughput Processing to Preserve Viable Cells: A Precision Medicine Initiative Cohort Program Workshop.

Authors:  Rebekah S Rasooly; Daniel R Gossett; Marianne K Henderson; Allison Hubel; Stephen N Thibodeau
Journal:  Biopreserv Biobank       Date:  2017-04-25       Impact factor: 2.300

Review 3.  Mass cytometry: blessed with the curse of dimensionality.

Authors:  Evan W Newell; Yang Cheng
Journal:  Nat Immunol       Date:  2016-07-19       Impact factor: 25.606

4.  Convergence of Highly Resolved and Rapid Screening Platforms with Dynamically Engineered, Cell Phenotype-Prescriptive Biomaterials.

Authors:  Neal K Bennett; Anandika Dhaliwal; Prabhas V Moghe
Journal:  Curr Pharmacol Rep       Date:  2016-03-18

Review 5.  Flow Cytometry: An Overview.

Authors:  Katherine M McKinnon
Journal:  Curr Protoc Immunol       Date:  2018-02-21

6.  Profiling of the Human Natural Killer Cell Receptor-Ligand Repertoire.

Authors:  Elena Vendrame; Julia L McKechnie; Thanmayi Ranganath; Nancy Q Zhao; Arjun Rustagi; Rosemary Vergara; Geoffrey T Ivison; Lisa M Kronstad; Laura J Simpson; Catherine A Blish
Journal:  J Vis Exp       Date:  2020-11-19       Impact factor: 1.355

7.  Mass cytometry analysis of immune cells in the brain.

Authors:  Ben Korin; Tania Dubovik; Asya Rolls
Journal:  Nat Protoc       Date:  2018-01-25       Impact factor: 13.491

8.  Preparing Viable Single Cells from Human Tissue and Tumors for Cytomic Analysis.

Authors:  Nalin Leelatian; Deon B Doxie; Allison R Greenplate; Justine Sinnaeve; Rebecca A Ihrie; Jonathan M Irish
Journal:  Curr Protoc Mol Biol       Date:  2017-04-03

9.  Mass cytometry reveals species-specific differences and a new level of complexity for immune cells in the prostate.

Authors:  Jonathan J Fox; Héctor I Navarro; Takao Hashimoto; Alejandro J Garcia; Andrew S Goldstein
Journal:  Am J Clin Exp Urol       Date:  2019-08-15

Review 10.  Beyond the message: advantages of snapshot proteomics with single-cell mass cytometry in solid tumors.

Authors:  Akshitkumar M Mistry; Allison R Greenplate; Rebecca A Ihrie; Jonathan M Irish
Journal:  FEBS J       Date:  2019-01-07       Impact factor: 5.542

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