Literature DB >> 26404824

The origins, determinants, and consequences of human mutations.

Jay Shendure1, Joshua M Akey1.   

Abstract

Germline mutations are the principal cause of heritable disease and the ultimate source of evolutionary change. Similarly, somatic mutations are the primary cause of cancer and may contribute to the burden of human disease more broadly than previously appreciated. Here, we review recent insights into the rates, spectrum, and determinants of genomic mutations and how these parameters inform our understanding of both Mendelian and complex human diseases. We also consider models for conceptualizing mutational consequences and outline several key areas for future research, including the development of new technologies to access and quantify the full spectrum of mutations, as well as to better interpret the consequences of mutations with respect to molecular functionality, evolutionary fitness, and disease pathogenicity.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26404824     DOI: 10.1126/science.aaa9119

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  49 in total

1.  CRISPR: A path through the thicket.

Authors:  Debra J H Mathews; Sarah Chan; Peter J Donovan; Thomas Douglas; Christopher Gyngell; John Harris; Alan Regenberg; Robin Lovell-Badge
Journal:  Nature       Date:  2015-11-12       Impact factor: 49.962

2.  Patterns of deleterious variation between human populations reveal an unbalanced load.

Authors:  Rajiv C McCoy; Joshua M Akey
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

3.  Endogenous network states predict gain or loss of functions for genetic mutations in hepatocellular carcinoma.

Authors:  Gaowei Wang; Hang Su; Helin Yu; Ruoshi Yuan; Xiaomei Zhu; Ping Ao
Journal:  J R Soc Interface       Date:  2016-02       Impact factor: 4.118

4.  Massively Parallel Genetics.

Authors:  Jay Shendure; Stanley Fields
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

Review 5.  Genome stability versus transcript diversity.

Authors:  Brian Magnuson; Karan Bedi; Mats Ljungman
Journal:  DNA Repair (Amst)       Date:  2016-05-16

Review 6.  Biophysical and Mechanistic Models for Disease-Causing Protein Variants.

Authors:  Amelie Stein; Douglas M Fowler; Rasmus Hartmann-Petersen; Kresten Lindorff-Larsen
Journal:  Trends Biochem Sci       Date:  2019-01-31       Impact factor: 13.807

7.  Molecular function limits divergent protein evolution on planetary timescales.

Authors:  Mariam M Konaté; Germán Plata; Jimin Park; Dinara R Usmanova; Harris Wang; Dennis Vitkup
Journal:  Elife       Date:  2019-09-18       Impact factor: 8.140

Review 8.  Tools for Predicting the Functional Impact of Nonsynonymous Genetic Variation.

Authors:  Haiming Tang; Paul D Thomas
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

Review 9.  Genetic predisposition to colorectal cancer: syndromes, genes, classification of genetic variants and implications for precision medicine.

Authors:  Laura Valle; Eduardo Vilar; Sean V Tavtigian; Elena M Stoffel
Journal:  J Pathol       Date:  2019-02-20       Impact factor: 7.996

10.  e-MutPath: computational modeling reveals the functional landscape of genetic mutations rewiring interactome networks.

Authors:  Yongsheng Li; Brandon Burgman; Ishaani S Khatri; Sairahul R Pentaparthi; Zhe Su; Daniel J McGrail; Yang Li; Erxi Wu; S Gail Eckhardt; Nidhi Sahni; S Stephen Yi
Journal:  Nucleic Acids Res       Date:  2021-01-11       Impact factor: 16.971

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