Literature DB >> 26396890

Crystal structure of 1-isopropyl-4,7-dimethyl-3-nitro-naphthalene.

Ahmed Benharref1, Jamal Elkarroumi1, Lahcen El Ammari2, Mohamed Saadi2, Moha Berraho1.   

Abstract

The title compound, C15H17NO2, was synthesized from a mixture of α-himachalene (2-methyl-ene-6,6,9-tri-methylbi-cyclo-[5.4.0(1,7)]undec-8-ene) and β-himachalene (2,6,6,9-tetra-methylbi-cyclo-[5.4.0(1,7)]undeca-1,8-diene), which were isolated from an oil of the Atlas cedar (Cedrus Atlantica). The naphthalene ring system makes dihedral angles of 68.6 (2) and 44.3 (2)°, respectively, with its attached isopropyl C/C/C plane and the nitro group. In the crystal, mol-ecules held together by a C-H⋯O inter-action, forming a chain along [-101].

Entities:  

Keywords:  C—H⋯O inter­action; crystal structure; essential oil of the Atlas cedar; nitro-naphthalene

Year:  2015        PMID: 26396890      PMCID: PMC4555421          DOI: 10.1107/S2056989015014395

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the main constituents of the essential oil of the Atlas cedar, see: El Haib et al. (2011 ▸); Loubidi et al. (2014 ▸). For the reactivity of these sesquiterpenes and their derivatives, see: Oukhrib et al. (2013 ▸); Zaki et al. (2014 ▸); Benharref et al. (2015 ▸). For anti­fungal activity of these sesquiterpenes and derivatives, see: Daoubi et al. (2004 ▸).

Experimental

Crystal data

C15H17NO2 M = 243.30 Monoclinic, a = 9.7637 (7) Å b = 12.6508 (9) Å c = 11.6162 (8) Å β = 113.897 (2)° V = 1311.82 (16) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.45 × 0.35 × 0.30 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.652, T max = 0.746 21437 measured reflections 2686 independent reflections 2164 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.147 S = 1.07 2686 reflections 167 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.17 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸). Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015014395/is5409sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015014395/is5409Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015014395/is5409Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015014395/is5409fig1.tif Mol­ecular structure of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are represented as small spheres of arbitrary radii. Click here for additional data file. ac . DOI: 10.1107/S2056989015014395/is5409fig2.tif Partial packing view showing the C—H⋯O inter­actions (dashed lines) and the formation of a chain along the ac diagonal. CCDC reference: 1415866 Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H17NO2F(000) = 520
Mr = 243.30Dx = 1.232 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 9.7637 (7) ÅCell parameters from 2686 reflections
b = 12.6508 (9) Åθ = 2.3–26.4°
c = 11.6162 (8) ŵ = 0.08 mm1
β = 113.897 (2)°T = 296 K
V = 1311.82 (16) Å3Box, colourless
Z = 40.45 × 0.35 × 0.30 mm
Bruker APEXII CCD diffractometer2686 independent reflections
Radiation source: fine-focus sealed tube2164 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
ω and φ scansθmax = 26.4°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→12
Tmin = 0.652, Tmax = 0.746k = −15→15
21437 measured reflectionsl = −14→12
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.147w = 1/[σ2(Fo2) + (0.0738P)2 + 0.3258P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
2686 reflectionsΔρmax = 0.22 e Å3
167 parametersΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.48931 (16)0.74540 (11)0.55728 (13)0.0410 (3)
C20.53127 (17)0.79068 (11)0.46989 (14)0.0458 (4)
H20.48560.85300.43050.055*
C30.64274 (16)0.74433 (12)0.43844 (13)0.0434 (3)
C40.71449 (15)0.65180 (12)0.48818 (13)0.0426 (3)
C50.66896 (14)0.60094 (11)0.57753 (12)0.0391 (3)
C60.73317 (18)0.50374 (13)0.63462 (15)0.0506 (4)
H60.80810.47350.61530.061*
C70.68819 (19)0.45344 (13)0.71690 (15)0.0540 (4)
H70.73230.38940.75200.065*
C80.57617 (17)0.49648 (12)0.74988 (13)0.0464 (4)
C90.51403 (16)0.59105 (12)0.69828 (13)0.0428 (3)
H90.44100.62040.72080.051*
C100.55666 (14)0.64644 (11)0.61141 (12)0.0370 (3)
C110.37186 (18)0.79765 (12)0.59387 (16)0.0509 (4)
H110.39620.77930.68200.061*
C120.2168 (2)0.75490 (16)0.5164 (2)0.0741 (6)
H12A0.19100.76900.42890.111*
H12B0.14550.78860.54200.111*
H12C0.21550.68000.52930.111*
C130.3728 (2)0.91812 (14)0.5855 (2)0.0693 (5)
H13A0.47270.94380.63170.104*
H13B0.30740.94720.62070.104*
H13C0.33880.93910.49890.104*
C140.82959 (18)0.60027 (15)0.45058 (17)0.0592 (4)
H14A0.83020.63480.37720.089*
H14B0.80500.52700.43220.089*
H14C0.92680.60620.51840.089*
C150.5277 (2)0.43966 (15)0.84114 (16)0.0637 (5)
H15A0.59860.45300.92570.096*
H15B0.52280.36510.82470.096*
H15C0.43070.46470.83120.096*
N10.67771 (18)0.80420 (11)0.34458 (13)0.0576 (4)
O10.5730 (2)0.84079 (13)0.25427 (14)0.0865 (5)
O20.80848 (18)0.81719 (14)0.36267 (14)0.0869 (5)
U11U22U33U12U13U23
C10.0427 (7)0.0414 (7)0.0442 (7)0.0013 (6)0.0230 (6)−0.0011 (6)
C20.0545 (8)0.0401 (7)0.0483 (8)0.0027 (6)0.0265 (7)0.0034 (6)
C30.0503 (8)0.0463 (8)0.0409 (7)−0.0084 (6)0.0261 (6)−0.0040 (6)
C40.0370 (7)0.0527 (8)0.0422 (7)−0.0046 (6)0.0204 (6)−0.0091 (6)
C50.0344 (7)0.0462 (8)0.0368 (7)0.0005 (5)0.0145 (5)−0.0035 (6)
C60.0465 (8)0.0531 (9)0.0529 (8)0.0121 (6)0.0209 (7)0.0009 (7)
C70.0576 (9)0.0491 (8)0.0495 (8)0.0092 (7)0.0157 (7)0.0083 (7)
C80.0489 (8)0.0496 (8)0.0381 (7)−0.0055 (6)0.0149 (6)0.0019 (6)
C90.0432 (7)0.0497 (8)0.0403 (7)−0.0003 (6)0.0219 (6)−0.0007 (6)
C100.0362 (6)0.0408 (7)0.0361 (7)−0.0010 (5)0.0167 (5)−0.0027 (5)
C110.0559 (9)0.0490 (9)0.0586 (9)0.0116 (7)0.0344 (7)0.0050 (7)
C120.0555 (10)0.0673 (12)0.1121 (16)0.0006 (9)0.0469 (11)−0.0110 (11)
C130.0697 (11)0.0513 (10)0.0976 (14)0.0112 (8)0.0450 (11)−0.0053 (9)
C140.0516 (9)0.0752 (11)0.0628 (10)0.0041 (8)0.0357 (8)−0.0067 (8)
C150.0735 (11)0.0662 (11)0.0514 (9)−0.0090 (9)0.0253 (8)0.0127 (8)
N10.0814 (10)0.0541 (8)0.0539 (8)−0.0129 (7)0.0444 (8)−0.0072 (6)
O10.1158 (12)0.0876 (10)0.0662 (9)0.0121 (9)0.0474 (9)0.0262 (8)
O20.0923 (10)0.1066 (12)0.0894 (10)−0.0334 (9)0.0653 (9)−0.0057 (8)
C1—C21.3651 (19)C9—H90.9300
C1—C101.4353 (19)C11—C121.514 (3)
C1—C111.5256 (19)C11—C131.527 (2)
C2—C31.408 (2)C11—H110.9800
C2—H20.9300C12—H12A0.9600
C3—C41.366 (2)C12—H12B0.9600
C3—N11.4767 (18)C12—H12C0.9600
C4—C51.4362 (19)C13—H13A0.9600
C4—C141.5087 (19)C13—H13B0.9600
C5—C61.417 (2)C13—H13C0.9600
C5—C101.4276 (18)C14—H14A0.9600
C6—C71.361 (2)C14—H14B0.9600
C6—H60.9300C14—H14C0.9600
C7—C81.407 (2)C15—H15A0.9600
C7—H70.9300C15—H15B0.9600
C8—C91.365 (2)C15—H15C0.9600
C8—C151.507 (2)N1—O21.218 (2)
C9—C101.4223 (18)N1—O11.221 (2)
C2—C1—C10118.00 (12)C1—C11—C13112.97 (14)
C2—C1—C11120.75 (13)C12—C11—H11107.3
C10—C1—C11121.24 (12)C1—C11—H11107.3
C1—C2—C3120.96 (13)C13—C11—H11107.3
C1—C2—H2119.5C11—C12—H12A109.5
C3—C2—H2119.5C11—C12—H12B109.5
C4—C3—C2124.38 (13)H12A—C12—H12B109.5
C4—C3—N1121.29 (13)C11—C12—H12C109.5
C2—C3—N1114.33 (13)H12A—C12—H12C109.5
C3—C4—C5115.69 (12)H12B—C12—H12C109.5
C3—C4—C14124.21 (13)C11—C13—H13A109.5
C5—C4—C14120.04 (14)C11—C13—H13B109.5
C6—C5—C10117.68 (12)H13A—C13—H13B109.5
C6—C5—C4121.27 (12)C11—C13—H13C109.5
C10—C5—C4121.05 (13)H13A—C13—H13C109.5
C7—C6—C5121.81 (14)H13B—C13—H13C109.5
C7—C6—H6119.1C4—C14—H14A109.5
C5—C6—H6119.1C4—C14—H14B109.5
C6—C7—C8121.20 (14)H14A—C14—H14B109.5
C6—C7—H7119.4C4—C14—H14C109.5
C8—C7—H7119.4H14A—C14—H14C109.5
C9—C8—C7118.42 (13)H14B—C14—H14C109.5
C9—C8—C15121.09 (15)C8—C15—H15A109.5
C7—C8—C15120.49 (15)C8—C15—H15B109.5
C8—C9—C10122.51 (13)H15A—C15—H15B109.5
C8—C9—H9118.7C8—C15—H15C109.5
C10—C9—H9118.7H15A—C15—H15C109.5
C9—C10—C5118.37 (12)H15B—C15—H15C109.5
C9—C10—C1121.79 (12)O2—N1—O1123.46 (15)
C5—C10—C1119.85 (12)O2—N1—C3118.79 (15)
C12—C11—C1111.31 (13)O1—N1—C3117.71 (15)
C12—C11—C13110.42 (15)
D—H···AD—HH···AD···AD—H···A
C9—H9···O2i0.932.603.4823 (18)159
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C9H9O2i 0.932.603.4823(18)159

Symmetry code: (i) .

  6 in total

1.  Screening study for potential lead compounds for natural product-based fungicides: I. Synthesis and in vitro evaluation of coumarins against Botrytis cinerea.

Authors:  Mourad Daoubi; Rosa Durán-Patrón; Mohamed Hmamouchi; Rosario Hernández-Galán; Ahmed Benharref; Isidro G Collado
Journal:  Pest Manag Sci       Date:  2004-09       Impact factor: 4.845

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Crystal structure of (1S,3R,8R,9S,10R)-10-bromo-methyl-2,2-di-chloro-9,10-ep-oxy-3,7,7-tri-methyl-tri-cyclo-[6.4.0.0(1,3)]dodeca-ne.

Authors:  Ahmed Benharref; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-09

4.  (1R,4R,6S,7R)-5,5-Di-bromo-1,4,8,8-tetra-methyl-tri-cyclo-[5.4.1.0(4,6)]dodecan-12-one.

Authors:  Mohamed Zaki; Ahmed Benharref; Jean-Claude Daran; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-09

5.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

6.  (1S,3R,8R,9R,10S)-2,2-Dibromo-3,7,7,10-tetra-methyl-9β,10β-ep-oxy-3,7,7,10-tetra-methyl-tricyclo-[6.4.0.0(1,3)]dodeca-ne.

Authors:  Abdelouahd Oukhrib; Ahmed Benharref; Mohamed Saadi; Moha Berraho; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-09
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.