Literature DB >> 26386961

15N, 13C and 1H backbone resonance assignments of an artificially engineered TEM-1/PSE-4 class A β-lactamase chimera and its deconvoluted mutant.

Sophie M C Gobeil1,2, Donald Gagné2,3,4,5, Nicolas Doucet2,3,4, Joelle N Pelletier6,7,8.   

Abstract

The widespread use of β-lactam antibiotics has given rise to a dramatic increase in clinically-relevant β-lactamases. Understanding the structure/function relation in these variants is essential to better address the ever-growing incidence of antibiotic resistance. We previously reported the backbone resonance assignments of a chimeric protein constituted of segments of the class A β-lactamases TEM-1 and PSE-4 (Morin et al. in Biomol NMR Assign 4:127-130, 2010. doi: 10.1007/s12104-010-9227-8 ). That chimera, cTEM17m, held 17 amino acid substitutions relative to TEM-1 β-lactamase, resulting in a well-folded and fully functional protein with increased dynamics. Here we report the (1)H, (13)C and (15)N backbone resonance assignments of chimera cTEM-19m, which includes 19 substitutions and exhibits increased active-site perturbation, as well as one of its deconvoluted variants, as the first step in the analysis of their dynamic behaviours.

Entities:  

Keywords:  Antibiotic resistance; Chimera; PSE-4; Protein engineering; TEM-1; β-Lactamase

Mesh:

Substances:

Year:  2015        PMID: 26386961      PMCID: PMC5419827          DOI: 10.1007/s12104-015-9645-8

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  17 in total

1.  Library analysis of SCHEMA-guided protein recombination.

Authors:  Michelle M Meyer; Jonathan J Silberg; Christopher A Voigt; Jeffrey B Endelman; Stephen L Mayo; Zhen-Gang Wang; Frances H Arnold
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

2.  A standard numbering scheme for the class A beta-lactamases.

Authors:  R P Ambler; A F Coulson; J M Frère; J M Ghuysen; B Joris; M Forsman; R C Levesque; G Tiraby; S G Waley
Journal:  Biochem J       Date:  1991-05-15       Impact factor: 3.857

3.  NMR View: A computer program for the visualization and analysis of NMR data.

Authors:  B A Johnson; R A Blevins
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

4.  1H, 13C, and 15N backbone resonance assignments for PSE-4, a 29.5 kDa class A beta-lactamase from Pseudomonas aeruginosa.

Authors:  Sébastien Morin; Roger C Levesque; Stéphane M Gagné
Journal:  J Biomol NMR       Date:  2006       Impact factor: 2.835

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Backbone dynamics of TEM-1 determined by NMR: evidence for a highly ordered protein.

Authors:  Pierre-Yves Savard; Stéphane M Gagné
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

7.  An ultrahigh resolution structure of TEM-1 beta-lactamase suggests a role for Glu166 as the general base in acylation.

Authors:  George Minasov; Xiaojun Wang; Brian K Shoichet
Journal:  J Am Chem Soc       Date:  2002-05-15       Impact factor: 15.419

8.  Insights into the molecular basis for the carbenicillinase activity of PSE-4 beta-lactamase from crystallographic and kinetic studies.

Authors:  D Lim; F Sanschagrin; L Passmore; L De Castro; R C Levesque; N C Strynadka
Journal:  Biochemistry       Date:  2001-01-16       Impact factor: 3.162

9.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

10.  1H, 13C and 15N backbone resonance assignments for TEM-1, a 28.9 kDa beta-lactamase from E. coli.

Authors:  Pierre-Yves Savard; Alejandro Sosa-Peinado; Roger C Levesque; Marvin W Makinen; Stéphane M Gagné
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

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  3 in total

1.  Integron-Associated DfrB4, a Previously Uncharacterized Member of the Trimethoprim-Resistant Dihydrofolate Reductase B Family, Is a Clinically Identified Emergent Source of Antibiotic Resistance.

Authors:  Jacynthe L Toulouse; Thaddeus J Edens; Lorea Alejaldre; Amee R Manges; Joelle N Pelletier
Journal:  Antimicrob Agents Chemother       Date:  2017-04-24       Impact factor: 5.191

2.  The Bacterial Genomic Context of Highly Trimethoprim-Resistant DfrB Dihydrofolate Reductases Highlights an Emerging Threat to Public Health.

Authors:  Claudèle Lemay-St-Denis; Sarah-Slim Diwan; Joelle N Pelletier
Journal:  Antibiotics (Basel)       Date:  2021-04-13

3.  The Structural Dynamics of Engineered β-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function.

Authors:  Sophie M C Gobeil; Maximillian C C J C Ebert; Jaeok Park; Donald Gagné; Nicolas Doucet; Albert M Berghuis; Jürgen Pleiss; Joelle N Pelletier
Journal:  Sci Rep       Date:  2019-04-30       Impact factor: 4.379

  3 in total

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