Literature DB >> 26373345

Genome Engineering Using Adeno-associated Virus: Basic and Clinical Research Applications.

Thomas Gaj1, Benjamin E Epstein2, David V Schaffer1,2,3,4.   

Abstract

In addition to their broad potential for therapeutic gene delivery, adeno-associated virus (AAV) vectors possess the innate ability to stimulate homologous recombination in mammalian cells at high efficiencies. This process--referred to as AAV-mediated gene targeting--has enabled the introduction of a diverse array of genomic modifications both in vitro and in vivo. With the recent emergence of targeted nucleases, AAV-mediated genome engineering is poised for clinical translation. Here, we review key properties of AAV vectors that underscore its unique utility in genome editing. We highlight the broad range of genome engineering applications facilitated by this technology and discuss the strong potential for unifying AAV with targeted nucleases for next-generation gene therapy.

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Year:  2015        PMID: 26373345      PMCID: PMC4786909          DOI: 10.1038/mt.2015.151

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  107 in total

Review 1.  Genome editing. The new frontier of genome engineering with CRISPR-Cas9.

Authors:  Jennifer A Doudna; Emmanuelle Charpentier
Journal:  Science       Date:  2014-11-28       Impact factor: 47.728

Review 2.  Engineering adeno-associated viruses for clinical gene therapy.

Authors:  Melissa A Kotterman; David V Schaffer
Journal:  Nat Rev Genet       Date:  2014-05-20       Impact factor: 53.242

3.  Design and packaging of adeno-associated virus gene targeting vectors.

Authors:  R K Hirata; D W Russell
Journal:  J Virol       Date:  2000-05       Impact factor: 5.103

4.  CRISPR/Cas9-mediated genome engineering: an adeno-associated viral (AAV) vector toolbox.

Authors:  Elena Senís; Chronis Fatouros; Stefanie Große; Ellen Wiedtke; Dominik Niopek; Ann-Kristin Mueller; Kathleen Börner; Dirk Grimm
Journal:  Biotechnol J       Date:  2014-10-06       Impact factor: 4.677

5.  Roles of adeno-associated virus Rep protein and human chromosome 19 in site-specific recombination.

Authors:  S M Young; D M McCarty; N Degtyareva; R J Samulski
Journal:  J Virol       Date:  2000-05       Impact factor: 5.103

6.  In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.

Authors:  Lukasz Swiech; Matthias Heidenreich; Abhishek Banerjee; Naomi Habib; Yinqing Li; John Trombetta; Mriganka Sur; Feng Zhang
Journal:  Nat Biotechnol       Date:  2014-10-19       Impact factor: 54.908

7.  Permanent alteration of PCSK9 with in vivo CRISPR-Cas9 genome editing.

Authors:  Qiurong Ding; Alanna Strong; Kevin M Patel; Sze-Ling Ng; Bridget S Gosis; Stephanie N Regan; Chad A Cowan; Daniel J Rader; Kiran Musunuru
Journal:  Circ Res       Date:  2014-06-10       Impact factor: 17.367

8.  Long-term safety and efficacy of factor IX gene therapy in hemophilia B.

Authors:  Amit C Nathwani; Ulreke M Reiss; Edward G D Tuddenham; Cecilia Rosales; Pratima Chowdary; Jenny McIntosh; Marco Della Peruta; Elsa Lheriteau; Nishal Patel; Deepak Raj; Anne Riddell; Jun Pie; Savita Rangarajan; David Bevan; Michael Recht; Yu-Min Shen; Kathleen G Halka; Etiena Basner-Tschakarjan; Federico Mingozzi; Katherine A High; James Allay; Mark A Kay; Catherine Y C Ng; Junfang Zhou; Maria Cancio; Christopher L Morton; John T Gray; Deokumar Srivastava; Arthur W Nienhuis; Andrew M Davidoff
Journal:  N Engl J Med       Date:  2014-11-20       Impact factor: 176.079

9.  Promoterless gene targeting without nucleases ameliorates haemophilia B in mice.

Authors:  A Barzel; N K Paulk; Y Shi; Y Huang; K Chu; F Zhang; P N Valdmanis; L P Spector; M H Porteus; K M Gaensler; M A Kay
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

10.  A genome-wide map of adeno-associated virus-mediated human gene targeting.

Authors:  David R Deyle; R Scott Hansen; Anda M Cornea; Li B Li; Amber A Burt; Ian E Alexander; Richard S Sandstrom; John A Stamatoyannopoulos; Chia-Lin Wei; David W Russell
Journal:  Nat Struct Mol Biol       Date:  2014-10-05       Impact factor: 15.369

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  40 in total

1.  Systematic proteomics of endogenous human cohesin reveals an interaction with diverse splicing factors and RNA-binding proteins required for mitotic progression.

Authors:  Jung-Sik Kim; Xiaoyuan He; Jie Liu; Zhijun Duan; Taeyeon Kim; Julia Gerard; Brian Kim; Manoj M Pillai; William S Lane; William S Noble; Bogdan Budnik; Todd Waldman
Journal:  J Biol Chem       Date:  2019-04-22       Impact factor: 5.157

2.  Adeno-Associated Virus 5 Transduces Adipose-Derived Stem Cells with Greater Efficacy Than Other Adeno-Associated Viral Serotypes.

Authors:  Priyanka Sharma; Sunishka M Wimalawansa; Gregory C Gould; R Michael Johnson; Katherine J D A Excoffon
Journal:  Hum Gene Ther Methods       Date:  2016-11-07       Impact factor: 2.396

Review 3.  Next-generation stem cells - ushering in a new era of cell-based therapies.

Authors:  Erin A Kimbrel; Robert Lanza
Journal:  Nat Rev Drug Discov       Date:  2020-04-06       Impact factor: 84.694

Review 4.  Delivery technologies for genome editing.

Authors:  Hao Yin; Kevin J Kauffman; Daniel G Anderson
Journal:  Nat Rev Drug Discov       Date:  2017-03-24       Impact factor: 84.694

Review 5.  Gene therapy approaches in the non-human primate model of Parkinson's disease.

Authors:  D Pignataro; D Sucunza; A J Rico; I G Dopeso-Reyes; E Roda; A I Rodríguez-Perez; J L Labandeira-Garcia; V Broccoli; S Kato; K Kobayashi; José L Lanciego
Journal:  J Neural Transm (Vienna)       Date:  2017-01-27       Impact factor: 3.575

Review 6.  Genome-Editing Technologies: Principles and Applications.

Authors:  Thomas Gaj; Shannon J Sirk; Sai-Lan Shui; Jia Liu
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-12-01       Impact factor: 10.005

Review 7.  Attenuation of Inherited and Acquired Retinal Degeneration Progression with Gene-based Techniques.

Authors:  Galaxy Y Cho; Kyle Bolo; Karen Sophia Park; Jesse D Sengillo; Stephen H Tsang
Journal:  Mol Diagn Ther       Date:  2019-02       Impact factor: 4.074

8.  Identification of liver-specific enhancer-promoter activity in the 3' untranslated region of the wild-type AAV2 genome.

Authors:  Grant J Logan; Allison P Dane; Claus V Hallwirth; Christine M Smyth; Emilie E Wilkie; Anais K Amaya; Erhua Zhu; Neeta Khandekar; Samantha L Ginn; Sophia H Y Liao; Sharon C Cunningham; Natsuki Sasaki; Martí Cabanes-Creus; Patrick P L Tam; David W Russell; Leszek Lisowski; Ian E Alexander
Journal:  Nat Genet       Date:  2017-06-19       Impact factor: 38.330

Review 9.  Delivery strategies of the CRISPR-Cas9 gene-editing system for therapeutic applications.

Authors:  Chang Liu; Li Zhang; Hao Liu; Kun Cheng
Journal:  J Control Release       Date:  2017-09-11       Impact factor: 9.776

Review 10.  Physical, chemical, and synthetic virology: Reprogramming viruses as controllable nanodevices.

Authors:  Maria Yanqing Chen; Susan S Butler; Weitong Chen; Junghae Suh
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2018-11-08
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