Literature DB >> 26370938

A combined kinetic push and thermodynamic pull as driving forces for outer membrane protein sorting and folding in bacteria.

Karen G Fleming1.   

Abstract

In vitro folding studies of outer membrane beta-barrels have been invaluable in revealing the lipid effects on folding rates and efficiencies as well as folding free energies. Here, the biophysical results are summarized, and these kinetic and thermodynamic findings are considered in terms of the requirements for folding in the context of the cellular environment. Because the periplasm lacks an external energy source the only driving forces for sorting and folding available within this compartment are binding or folding free energies and their associated rates. These values define functions for periplasmic chaperones and suggest a biophysical mechanism for the BAM complex.
© 2015 The Author(s).

Entities:  

Keywords:  chaperone; driving forces; membrane protein; outer membrane protein; protein folding; protein sorting

Mesh:

Substances:

Year:  2015        PMID: 26370938      PMCID: PMC4632602          DOI: 10.1098/rstb.2015.0026

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  39 in total

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Authors:  Y Shai
Journal:  Biochim Biophys Acta       Date:  1999-12-15

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Authors:  L K Nielsen; T Bjørnholm; O G Mouritsen
Journal:  Nature       Date:  2000-03-23       Impact factor: 49.962

3.  Folding and insertion of the outer membrane protein OmpA is assisted by the chaperone Skp and by lipopolysaccharide.

Authors:  Paula V Bulieris; Susanne Behrens; Otto Holst; Jörg H Kleinschmidt
Journal:  J Biol Chem       Date:  2002-12-30       Impact factor: 5.157

4.  Secondary and tertiary structure formation of the beta-barrel membrane protein OmpA is synchronized and depends on membrane thickness.

Authors:  Jörg H Kleinschmidt; Lukas K Tamm
Journal:  J Mol Biol       Date:  2002-11-22       Impact factor: 5.469

5.  Lipid membrane phase behaviour elucidated in real time by controlled environment atomic force microscopy.

Authors:  Fuyuki Tokumasu; Albert J Jin; James A Dvorak
Journal:  J Electron Microsc (Tokyo)       Date:  2002

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Authors:  T Surrey; F Jähnig
Journal:  J Biol Chem       Date:  1995-11-24       Impact factor: 5.157

7.  Genetic evidence for parallel pathways of chaperone activity in the periplasm of Escherichia coli.

Authors:  A E Rizzitello; J R Harper; T J Silhavy
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

8.  Improved methods for producing outer membrane vesicles in Gram-negative bacteria.

Authors:  Thomas Henry; Stéphanie Pommier; Laure Journet; Alain Bernadac; Jean-Pierre Gorvel; Roland Lloubès
Journal:  Res Microbiol       Date:  2004 Jul-Aug       Impact factor: 3.992

9.  The trimeric periplasmic chaperone Skp of Escherichia coli forms 1:1 complexes with outer membrane proteins via hydrophobic and electrostatic interactions.

Authors:  Jian Qu; Christoph Mayer; Susanne Behrens; Otto Holst; Jörg H Kleinschmidt
Journal:  J Mol Biol       Date:  2007-09-14       Impact factor: 5.469

10.  Refolding and oriented insertion of a membrane protein into a lipid bilayer.

Authors:  T Surrey; F Jähnig
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

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  27 in total

1.  The bacterial cell envelope.

Authors:  Colin Kleanthous; Judith P Armitage
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-10-05       Impact factor: 6.237

2.  The Bam complex catalyzes efficient insertion of bacterial outer membrane proteins into membrane vesicles of variable lipid composition.

Authors:  Sunyia Hussain; Harris D Bernstein
Journal:  J Biol Chem       Date:  2018-01-08       Impact factor: 5.157

3.  Structural basis for substrate selection by the translocation and assembly module of the β-barrel assembly machinery.

Authors:  Rebecca S Bamert; Karl Lundquist; Hyea Hwang; Chaille T Webb; Takoya Shiota; Christopher J Stubenrauch; Mathew J Belousoff; Robert J A Goode; Ralf B Schittenhelm; Richard Zimmerman; Martin Jung; James C Gumbart; Trevor Lithgow
Journal:  Mol Microbiol       Date:  2017-08-09       Impact factor: 3.501

4.  Effective assembly of fimbriae in Escherichia coli depends on the translocation assembly module nanomachine.

Authors:  Christopher Stubenrauch; Matthew J Belousoff; Iain D Hay; Hsin-Hui Shen; James Lillington; Kellie L Tuck; Kate M Peters; Minh-Duy Phan; Alvin W Lo; Mark A Schembri; Richard A Strugnell; Gabriel Waksman; Trevor Lithgow
Journal:  Nat Microbiol       Date:  2016-05-16       Impact factor: 17.745

5.  Dynamic periplasmic chaperone reservoir facilitates biogenesis of outer membrane proteins.

Authors:  Shawn M Costello; Ashlee M Plummer; Patrick J Fleming; Karen G Fleming
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-01       Impact factor: 11.205

6.  Comparison of Single and Multiple Turnovers of SecYEG in Escherichia coli.

Authors:  Chunfeng Mao; Priya Bariya; Yuying Suo; Linda L Randall
Journal:  J Bacteriol       Date:  2020-11-19       Impact factor: 3.490

Review 7.  Transmembrane β-barrels: Evolution, folding and energetics.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-09-22       Impact factor: 3.747

8.  Extreme Dynamics in the BamA β-Barrel Seam.

Authors:  Pamela Arden Doerner; Marcelo C Sousa
Journal:  Biochemistry       Date:  2017-06-12       Impact factor: 3.162

Review 9.  From Chaperones to the Membrane with a BAM!

Authors:  Ashlee M Plummer; Karen G Fleming
Journal:  Trends Biochem Sci       Date:  2016-07-19       Impact factor: 13.807

10.  The Structure of a BamA-BamD Fusion Illuminates the Architecture of the β-Barrel Assembly Machine Core.

Authors:  Hans Thor Bergal; Alex Hunt Hopkins; Sandra Ines Metzner; Marcelo Carlos Sousa
Journal:  Structure       Date:  2015-12-31       Impact factor: 5.006

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