Literature DB >> 26370089

Pore hydration states of KcsA potassium channels in membranes.

Joseph R Blasic1, David L Worcester2, Klaus Gawrisch3, Philip Gurnev4, Mihaela Mihailescu5.   

Abstract

Water-filled hydrophobic cavities in channel proteins serve as gateways for transfer of ions across membranes, but their properties are largely unknown. We determined water distributions along the conduction pores in two tetrameric channels embedded in lipid bilayers using neutron diffraction: potassium channel KcsA and the transmembrane domain of M2 protein of influenza A virus. For the KcsA channel in the closed state, the distribution of water is peaked in the middle of the membrane, showing water in the central cavity adjacent to the selectivity filter. This water is displaced by the channel blocker tetrabutyl-ammonium. The amount of water associated with the channel was quantified, using neutron diffraction and solid state NMR. In contrast, the M2 proton channel shows a V-shaped water profile across the membrane, with a narrow constriction at the center, like the hourglass shape of its internal surface. These two types of water distribution are therefore very different in their connectivity to the bulk water. The water and protein profiles determined here provide important evidence concerning conformation and hydration of channels in membranes and the potential role of pore hydration in channel gating.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  KcsA; M2; influenza virus; ion channels; lipid bilayer; neutron diffraction; nuclear magnetic resonance (NMR); potassium channel

Mesh:

Substances:

Year:  2015        PMID: 26370089      PMCID: PMC4646329          DOI: 10.1074/jbc.M115.661819

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

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Review 5.  Neutron protein crystallography: current status and a brighter future.

Authors:  Dean A A Myles
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6.  Water clusters in nonpolar cavities.

Authors:  Subramanian Vaitheeswaran; Hao Yin; Jayendran C Rasaiah; Gerhard Hummer
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8.  Structural basis for the function and inhibition of an influenza virus proton channel.

Authors:  Amanda L Stouffer; Rudresh Acharya; David Salom; Anna S Levine; Luigi Di Costanzo; Cinque S Soto; Valentina Tereshko; Vikas Nanda; Steven Stayrook; William F DeGrado
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

9.  The preference of tryptophan for membrane interfaces.

Authors:  W M Yau; W C Wimley; K Gawrisch; S H White
Journal:  Biochemistry       Date:  1998-10-20       Impact factor: 3.162

10.  Single streptomyces lividans K(+) channels: functional asymmetries and sidedness of proton activation.

Authors:  L Heginbotham; M LeMasurier; L Kolmakova-Partensky; C Miller
Journal:  J Gen Physiol       Date:  1999-10       Impact factor: 4.086

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  5 in total

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Journal:  J Biol Chem       Date:  2019-10-16       Impact factor: 5.157

Review 2.  Why Nature Chose Potassium.

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Review 3.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

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4.  High-Resolution Structures of K+ Channels.

Authors:  Qiu-Xing Jiang
Journal:  Handb Exp Pharmacol       Date:  2021

5.  Unambiguous observation of blocked states reveals altered, blocker-induced, cardiac ryanodine receptor gating.

Authors:  Saptarshi Mukherjee; N Lowri Thomas; Alan J Williams
Journal:  Sci Rep       Date:  2016-10-05       Impact factor: 4.379

  5 in total

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