Literature DB >> 26370084

Structural and Functional Insights into the Cryoprotection of Membranes by the Intrinsically Disordered Dehydrins.

Matthew W Clarke1, Kelly F Boddington1, Josephine M Warnica1, John Atkinson1, Sarah McKenna1, Jeffrey Madge1, Christine H Barker1, Steffen P Graether2.   

Abstract

Dehydration can be due to desiccation caused by a lack of environmental water or to freezing caused by a lack of liquid water. Plants have evolved a large family of proteins called LEA (late embryogenesis abundant) proteins, which include the intrinsically disordered dehydrin (dehydration protein) family, to combat these abiotic stresses. Although transcription and translation studies have shown a correlation between dehydration stress and the presence of dehydrins, the biochemical mechanisms have remained somewhat elusive. We examine here the effect and structure of a small model dehydrin (Vitis riparia K2) on the protection of membranes from freeze-thaw stress. This protein is able to bind to liposomes containing phosphatidic acid and protect the liposomes from fusing after freeze-thaw treatment. The presence of K2 did not measurably affect liposome surface accessibility or lipid mobility but did lower its membrane transition temperature by 3 °C. Using sodium dodecyl sulfate as a membrane model, we examined the NMR structure of K2 in the presence and absence of the micelle. Biochemical and NMR experiments show that the conserved, lysine-rich segments are involved in the binding of the dehydrin to a membrane, whereas the poorly conserved φ segments play no role in binding or protection.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  circular dichroism (CD); cold stress; dehydrin; freeze/thaw; intrinsically disordered protein; liposome; membrane fusion; nuclear magnetic resonance (NMR)4; protein structure; stress

Mesh:

Substances:

Year:  2015        PMID: 26370084      PMCID: PMC4646386          DOI: 10.1074/jbc.M115.678219

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  58 in total

Review 1.  What does it mean to be natively unfolded?

Authors:  Vladimir N Uversky
Journal:  Eur J Biochem       Date:  2002-01

Review 2.  Membrane binding assays for peripheral proteins.

Authors:  W Cho; L Bittova; R V Stahelin
Journal:  Anal Biochem       Date:  2001-09-15       Impact factor: 3.365

3.  Tunable membrane binding of the intrinsically disordered dehydrin Lti30, a cold-induced plant stress protein.

Authors:  Sylvia K Eriksson; Michael Kutzer; Jan Procek; Gerhard Gröbner; Pia Harryson
Journal:  Plant Cell       Date:  2011-06-10       Impact factor: 11.277

4.  Computed circular dichroism spectra for the evaluation of protein conformation.

Authors:  N Greenfield; G D Fasman
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

5.  Immunolocalization of freezing-tolerance-associated proteins in the cytoplasm and nucleoplasm of wheat crown tissues.

Authors:  M Houde; C Daniel; M Lachapelle; F Allard; S Laliberté; F Sarhan
Journal:  Plant J       Date:  1995-10       Impact factor: 6.417

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  The importance of size and disorder in the cryoprotective effects of dehydrins.

Authors:  Stephanie L Hughes; Verena Schart; Janet Malcolmson; Kaley A Hogarth; David M Martynowicz; Erik Tralman-Baker; Shruti N Patel; Steffen P Graether
Journal:  Plant Physiol       Date:  2013-09-18       Impact factor: 8.340

8.  Chaperone activity of ERD10 and ERD14, two disordered stress-related plant proteins.

Authors:  Denes Kovacs; Eva Kalmar; Zsolt Torok; Peter Tompa
Journal:  Plant Physiol       Date:  2008-03-21       Impact factor: 8.340

9.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

10.  The K-segment of maize DHN1 mediates binding to anionic phospholipid vesicles and concomitant structural changes.

Authors:  Myong-Chul Koag; Stephan Wilkens; Raymond D Fenton; Josh Resnik; Evanly Vo; Timothy J Close
Journal:  Plant Physiol       Date:  2009-05-13       Impact factor: 8.340

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  17 in total

Review 1.  Structural disorder in plant proteins: where plasticity meets sessility.

Authors:  Alejandra A Covarrubias; Cesar L Cuevas-Velazquez; Paulette S Romero-Pérez; David F Rendón-Luna; Caspar C C Chater
Journal:  Cell Mol Life Sci       Date:  2017-06-22       Impact factor: 9.261

2.  Structure of an Intrinsically Disordered Stress Protein Alone and Bound to a Membrane Surface.

Authors:  John Atkinson; Matthew W Clarke; Josephine M Warnica; Kelly F Boddington; Steffen P Graether
Journal:  Biophys J       Date:  2016-08-09       Impact factor: 4.033

3.  Sequence composition versus sequence order in the cryoprotective function of an intrinsically disordered stress-response protein.

Authors:  Sharall R Palmer; Ray De Villa; Steffen P Graether
Journal:  Protein Sci       Date:  2019-05-29       Impact factor: 6.725

4.  The disordered plant dehydrin Lti30 protects the membrane during water-related stress by cross-linking lipids.

Authors:  Anjali Gupta; Jan K Marzinek; Damien Jefferies; Peter J Bond; Pia Harryson; Thorsten Wohland
Journal:  J Biol Chem       Date:  2019-02-28       Impact factor: 5.157

5.  Membrane-Induced Folding of the Plant Stress Dehydrin Lti30.

Authors:  Sylvia Eriksson; Nadejda Eremina; Andreas Barth; Jens Danielsson; Pia Harryson
Journal:  Plant Physiol       Date:  2016-04-26       Impact factor: 8.340

6.  Genome Analysis of Conserved Dehydrin Motifs in Vascular Plants.

Authors:  Ahmad A Malik; Michael Veltri; Kelly F Boddington; Karamjeet K Singh; Steffen P Graether
Journal:  Front Plant Sci       Date:  2017-05-04       Impact factor: 5.753

7.  The plant dehydrin Lti30 stabilizes lipid lamellar structures in varying hydration conditions.

Authors:  Jenny Marie Andersson; Quoc Dat Pham; Helena Mateos; Sylvia Eriksson; Pia Harryson; Emma Sparr
Journal:  J Lipid Res       Date:  2020-05-13       Impact factor: 5.922

Review 8.  The Many Faces of Amphipathic Helices.

Authors:  Manuel Giménez-Andrés; Alenka Čopič; Bruno Antonny
Journal:  Biomolecules       Date:  2018-07-05

9.  Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance.

Authors:  Sean R Stevenson; Yasuko Kamisugi; Chi H Trinh; Jeremy Schmutz; Jerry W Jenkins; Jane Grimwood; Wellington Muchero; Gerald A Tuskan; Stefan A Rensing; Daniel Lang; Ralf Reski; Michael Melkonian; Carl J Rothfels; Fay-Wei Li; Anders Larsson; Gane K-S Wong; Thomas A Edwards; Andrew C Cuming
Journal:  Plant Cell       Date:  2016-05-18       Impact factor: 11.277

10.  The in vitro structure and functions of the disordered late embryogenesis abundant three proteins.

Authors:  Karamjeet K Singh; Steffen P Graether
Journal:  Protein Sci       Date:  2021-02-05       Impact factor: 6.725

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