Literature DB >> 24047864

The importance of size and disorder in the cryoprotective effects of dehydrins.

Stephanie L Hughes1, Verena Schart, Janet Malcolmson, Kaley A Hogarth, David M Martynowicz, Erik Tralman-Baker, Shruti N Patel, Steffen P Graether.   

Abstract

Dehydrins protect plant proteins and membranes from damage during drought and cold. Vitis riparia K2 is a 48-residue protein that can protect lactate dehydrogenase from freeze-thaw damage by preventing the aggregation and denaturation of the enzyme. To further elucidate its mechanism, we used a series of V. riparia K2 concatemers (K4, K6, K8, and K10) and natural dehydrins (V. riparia YSK2, 60 kilodalton peach dehydrin [PCA60], barley dehydrin5 [Dhn5], Thellungiella salsuginea dehydrin2 [TsDHN-2], and Opuntia streptacantha dehydrin1 [OpsDHN-1]) to test the effect of the number of K-segments and dehydrin size on their ability to protect lactate dehydrogenase from freeze-thaw damage. The results show that the larger the hydrodynamic radius of the dehydrin, the more effective the cryoprotection. A similar trend is observed with polyethylene glycol, which would suggest that the protection is simply a nonspecific volume exclusion effect that can be manifested by any protein. However, structured proteins of a similar range of sizes did not show the same pattern and level of cryoprotection. Our results suggest that with respect to enzyme protection, dehydrins function primarily as molecular shields and that their intrinsic disorder is required for them to be an effective cryoprotectant. Lastly, we show that the cryoprotection by a dehydrin is not due to any antifreeze protein-like activity, as has been reported previously.

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Year:  2013        PMID: 24047864      PMCID: PMC3813657          DOI: 10.1104/pp.113.226803

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  48 in total

Review 1.  Structures and ice-binding faces of the alanine-rich type I antifreeze proteins.

Authors:  Shruti N Patel; Steffen P Graether
Journal:  Biochem Cell Biol       Date:  2010-04       Impact factor: 3.626

2.  Interactions of intrinsically disordered Thellungiella salsuginea dehydrins TsDHN-1 and TsDHN-2 with membranes - synergistic effects of lipid composition and temperature on secondary structure.

Authors:  Luna N Rahman; Lin Chen; Sumaiya Nazim; Vladimir V Bamm; Mahmoud W Yaish; Barbara A Moffatt; John R Dutcher; George Harauz
Journal:  Biochem Cell Biol       Date:  2010-10       Impact factor: 3.626

3.  Cryoprotective mechanism of a small intrinsically disordered dehydrin protein.

Authors:  Stephanie Hughes; Steffen P Graether
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

4.  Obtaining highly purified intrinsically disordered protein by boiling lysis and single step ion exchange.

Authors:  Alexandra M Livernois; Daniel J Hnatchuk; Emma E Findlater; Steffen P Graether
Journal:  Anal Biochem       Date:  2009-05-21       Impact factor: 3.365

5.  Hydration and hydrodynamic interactions of lysozyme: effects of chaotropic versus kosmotropic ions.

Authors:  Avanish S Parmar; Martin Muschol
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

6.  Tunable membrane binding of the intrinsically disordered dehydrin Lti30, a cold-induced plant stress protein.

Authors:  Sylvia K Eriksson; Michael Kutzer; Jan Procek; Gerhard Gröbner; Pia Harryson
Journal:  Plant Cell       Date:  2011-06-10       Impact factor: 11.277

7.  Anchored clathrate waters bind antifreeze proteins to ice.

Authors:  Christopher P Garnham; Robert L Campbell; Peter L Davies
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

8.  Functional characterization of an acidic SK(3) dehydrin isolated from an Opuntia streptacantha cDNA library.

Authors:  A E Ochoa-Alfaro; M Rodríguez-Kessler; M B Pérez-Morales; P Delgado-Sánchez; C L Cuevas-Velazquez; G Gómez-Anduro; J F Jiménez-Bremont
Journal:  Planta       Date:  2011-10-08       Impact factor: 4.116

9.  Effects of Group 3 LEA protein model peptides on desiccation-induced protein aggregation.

Authors:  Takao Furuki; Tempei Shimizu; Sohini Chakrabortee; Kentarou Yamakawa; Rie Hatanaka; Tsuyoshi Takahashi; Takahiro Kikawada; Takashi Okuda; Hisakazu Mihara; Alan Tunnacliffe; Minoru Sakurai
Journal:  Biochim Biophys Acta       Date:  2012-05-08

10.  Intrinsically disordered proteins as molecular shields.

Authors:  Sohini Chakrabortee; Rashmi Tripathi; Matthew Watson; Gabriele S Kaminski Schierle; Davy P Kurniawan; Clemens F Kaminski; Michael J Wise; Alan Tunnacliffe
Journal:  Mol Biosyst       Date:  2011-09-09
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  39 in total

Review 1.  Structural disorder in plant proteins: where plasticity meets sessility.

Authors:  Alejandra A Covarrubias; Cesar L Cuevas-Velazquez; Paulette S Romero-Pérez; David F Rendón-Luna; Caspar C C Chater
Journal:  Cell Mol Life Sci       Date:  2017-06-22       Impact factor: 9.261

Review 2.  LEA Proteins and the Evolution of the WHy Domain.

Authors:  Jasmin Mertens; Habibu Aliyu; Don A Cowan
Journal:  Appl Environ Microbiol       Date:  2018-07-17       Impact factor: 4.792

3.  Effect of an Intrinsically Disordered Plant Stress Protein on the Properties of Water.

Authors:  Luisa A Ferreira; Alicyia Walczyk Mooradally; Boris Zaslavsky; Vladimir N Uversky; Steffen P Graether
Journal:  Biophys J       Date:  2018-09-22       Impact factor: 4.033

4.  Structure of an Intrinsically Disordered Stress Protein Alone and Bound to a Membrane Surface.

Authors:  John Atkinson; Matthew W Clarke; Josephine M Warnica; Kelly F Boddington; Steffen P Graether
Journal:  Biophys J       Date:  2016-08-09       Impact factor: 4.033

5.  Sequence composition versus sequence order in the cryoprotective function of an intrinsically disordered stress-response protein.

Authors:  Sharall R Palmer; Ray De Villa; Steffen P Graether
Journal:  Protein Sci       Date:  2019-05-29       Impact factor: 6.725

6.  IDDomainSpotter: Compositional bias reveals domains in long disordered protein regions-Insights from transcription factors.

Authors:  Peter S Millard; Katrine Bugge; Riccardo Marabini; Wouter Boomsma; Meike Burow; Birthe B Kragelund
Journal:  Protein Sci       Date:  2019-11-11       Impact factor: 6.725

7.  Structural and Functional Insights into the Cryoprotection of Membranes by the Intrinsically Disordered Dehydrins.

Authors:  Matthew W Clarke; Kelly F Boddington; Josephine M Warnica; John Atkinson; Sarah McKenna; Jeffrey Madge; Christine H Barker; Steffen P Graether
Journal:  J Biol Chem       Date:  2015-09-14       Impact factor: 5.157

8.  Inhibition of ice recrystallization and cryoprotective activity of wheat proteins in liver and pancreatic cells.

Authors:  Mélanie Chow-Shi-Yée; Jennie G Briard; Mélanie Grondin; Diana A Averill-Bates; Robert N Ben; François Ouellet
Journal:  Protein Sci       Date:  2016-03-09       Impact factor: 6.725

Review 9.  A glass menagerie of low complexity sequences.

Authors:  Randal Halfmann
Journal:  Curr Opin Struct Biol       Date:  2016-05-31       Impact factor: 6.809

10.  Isolation, cloning, and characterization of a novel Sorghum dehydrin (SbDhn2) protein.

Authors:  Tanmoy Halder; Tanushree Agarwal; Sudipta Ray
Journal:  Protoplasma       Date:  2015-11-04       Impact factor: 3.356

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