Literature DB >> 26355015

A Genetic Network Associated With Stress Resistance, Longevity, and Cancer in Humans.

Morgan E Levine1, Eileen M Crimmins2.   

Abstract

Human longevity and diseases are likely influenced by multiple interacting genes within a few biologically conserved pathways. Using long-lived smokers as a phenotype (n = 90)-a group whose survival may signify innate resilience-we conducted a genome-wide association study comparing them to smokers at ages 52-69 (n = 730). These results were used to conduct a functional interaction network and pathway analysis, to identify single nucleotide polymorphisms that collectively related to smokers' longevity. We identified a set of 215 single nucleotide polymorphisms (all of which had p <5×10(-3) in the genome-wide association study) that were located within genes making-up a functional interaction network. These single nucleotide polymorphisms were then used to create a weighted polygenic risk score that, using an independent validation sample of nonsmokers (N = 6,447), was found to be significantly associated with a 22% increase in the likelihood of being aged 90-99 (n = 253) and an over threefold increase in the likelihood of being a centenarian (n = 4), compared with being at ages 52-79 (n = 4,900). Additionally, the polygenic risk score was also associated with an 11% reduction in cancer prevalence over up to 18 years (odds ratio: 0.89, p = .011). Overall, using a unique phenotype and incorporating prior knowledge of biological networks, this study identified a set of single nucleotide polymorphisms that together appear to be important for human aging, stress resistance, cancer, and longevity.
© The Author 2015. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Cancer; Genetic network; HRS; Longevity; Polygenic risk score; Resilience

Mesh:

Year:  2015        PMID: 26355015      PMCID: PMC4888382          DOI: 10.1093/gerona/glv141

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


  48 in total

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Journal:  J Gerontol A Biol Sci Med Sci       Date:  2014-09-08       Impact factor: 6.053

4.  Cohort Profile: the Health and Retirement Study (HRS).

Authors:  Amanda Sonnega; Jessica D Faul; Mary Beth Ofstedal; Kenneth M Langa; John W R Phillips; David R Weir
Journal:  Int J Epidemiol       Date:  2014-03-25       Impact factor: 7.196

Review 5.  Evolutionary medicine: from dwarf model systems to healthy centenarians?

Authors:  Valter D Longo; Caleb E Finch
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Authors:  Anatoliy I Yashin; Deqing Wu; Konstantin G Arbeev; Svetlana V Ukraintseva
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7.  Genetic influence on human lifespan and longevity.

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Journal:  Hum Genet       Date:  2006-02-04       Impact factor: 4.132

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Authors:  Nick Patterson; Alkes L Price; David Reich
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Authors:  Anna Csiszar; Andrej Podlutsky; Michael S Wolin; Gyorgy Losonczy; Pal Pacher; Zoltan Ungvari
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10.  The Reactome pathway knowledgebase.

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Journal:  Nucleic Acids Res       Date:  2013-11-15       Impact factor: 16.971

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  11 in total

Review 1.  New Therapeutic Approaches and Biomarkers for Increased Healthspan.

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2.  Mortality selection in a genetic sample and implications for association studies.

Authors:  Benjamin W Domingue; Daniel W Belsky; Amal Harrati; Dalton Conley; David R Weir; Jason D Boardman
Journal:  Int J Epidemiol       Date:  2017-08-01       Impact factor: 7.196

3.  A Weighted SNP Correlation Network Method for Estimating Polygenic Risk Scores.

Authors:  Morgan E Levine; Peter Langfelder; Steve Horvath
Journal:  Methods Mol Biol       Date:  2017

4.  The Alzheimer's Disease Exposome.

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Journal:  Alzheimers Dement       Date:  2019-09-10       Impact factor: 21.566

5.  Predictors and Implications of Accelerated Cognitive Aging.

Authors:  Morgan E Levine; Amal Harrati; Eileen M Crimmins
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6.  Cross-Species and Human Inter-Tissue Network Analysis of Genes Implicated in Longevity and Aging Reveal Strong Support for Nutrient Sensing.

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7.  Gene-Environment Interactions and Stochastic Variations in the Gero-Exposome.

Authors:  Caleb E Finch; Amin Haghani
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8.  An epigenetic biomarker of aging for lifespan and healthspan.

Authors:  Morgan E Levine; Ake T Lu; Austin Quach; Brian H Chen; Themistocles L Assimes; Stefania Bandinelli; Lifang Hou; Andrea A Baccarelli; James D Stewart; Yun Li; Eric A Whitsel; James G Wilson; Alex P Reiner; Abraham Aviv; Kurt Lohman; Yongmei Liu; Luigi Ferrucci; Steve Horvath
Journal:  Aging (Albany NY)       Date:  2018-04-18       Impact factor: 5.682

9.  The longevity SNP rs2802292 uncovered: HSF1 activates stress-dependent expression of FOXO3 through an intronic enhancer.

Authors:  Valentina Grossi; Giovanna Forte; Paola Sanese; Alessia Peserico; Tugsan Tezil; Martina Lepore Signorile; Candida Fasano; Rosaura Lovaglio; Rosanna Bagnulo; Daria C Loconte; Francesco C Susca; Nicoletta Resta; Cristiano Simone
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

10.  Underlying features of epigenetic aging clocks in vivo and in vitro.

Authors:  Zuyun Liu; Diana Leung; Kyra Thrush; Wei Zhao; Scott Ratliff; Toshiko Tanaka; Lauren L Schmitz; Jennifer A Smith; Luigi Ferrucci; Morgan E Levine
Journal:  Aging Cell       Date:  2020-09-15       Impact factor: 9.304

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