Literature DB >> 25199915

GWAS of longevity in CHARGE consortium confirms APOE and FOXO3 candidacy.

Linda Broer1, Aron S Buchman2, Joris Deelen3, Daniel S Evans4, Jessica D Faul5, Kathryn L Lunetta6, Paola Sebastiani7, Jennifer A Smith8, Albert V Smith9, Toshiko Tanaka10, Lei Yu2, Alice M Arnold11, Thor Aspelund9, Emelia J Benjamin12, Philip L De Jager13, Gudny Eirkisdottir14, Denis A Evans15, Melissa E Garcia16, Albert Hofman17, Robert C Kaplan18, Sharon L R Kardia8, Douglas P Kiel19, Ben A Oostra17, Eric S Orwoll20, Neeta Parimi4, Bruce M Psaty21, Fernando Rivadeneira22, Jerome I Rotter23, Sudha Seshadri24, Andrew Singleton25, Henning Tiemeier26, André G Uitterlinden1, Wei Zhao8, Stefania Bandinelli27, David A Bennett2, Luigi Ferrucci10, Vilmundur Gudnason9, Tamara B Harris16, David Karasik28, Lenore J Launer16, Thomas T Perls29, P Eline Slagboom3, Gregory J Tranah30, David R Weir5, Anne B Newman31, Cornelia M van Duijn32, Joanne M Murabito33.   

Abstract

BACKGROUND: The genetic contribution to longevity in humans has been estimated to range from 15% to 25%. Only two genes, APOE and FOXO3, have shown association with longevity in multiple independent studies.
METHODS: We conducted a meta-analysis of genome-wide association studies including 6,036 longevity cases, age ≥90 years, and 3,757 controls that died between ages 55 and 80 years. We additionally attempted to replicate earlier identified single nucleotide polymorphism (SNP) associations with longevity.
RESULTS: In our meta-analysis, we found suggestive evidence for the association of SNPs near CADM2 (odds ratio [OR] = 0.81; p value = 9.66 × 10(-7)) and GRIK2 (odds ratio = 1.24; p value = 5.09 × 10(-8)) with longevity. When attempting to replicate findings earlier identified in genome-wide association studies, only the APOE locus consistently replicated. In an additional look-up of the candidate gene FOXO3, we found that an earlier identified variant shows a highly significant association with longevity when including published data with our meta-analysis (odds ratio = 1.17; p value = 1.85×10(-10)).
CONCLUSIONS: We did not identify new genome-wide significant associations with longevity and did not replicate earlier findings except for APOE and FOXO3. Our inability to find new associations with survival to ages ≥90 years because longevity represents multiple complex traits with heterogeneous genetic underpinnings, or alternatively, that longevity may be regulated by rare variants that are not captured by standard genome-wide genotyping and imputation of common variants.
© The Author 2014. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  APOE.; FOXO3; GWAS; Longevity

Mesh:

Substances:

Year:  2014        PMID: 25199915      PMCID: PMC4296168          DOI: 10.1093/gerona/glu166

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


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