Literature DB >> 26333306

Chemoenzymatic Synthesis of Acyl Coenzyme A Substrates Enables in Situ Labeling of Small Molecules and Proteins.

Vinayak Agarwal, Stefan Diethelm, Lauren Ray, Neha Garg, Takayoshi Awakawa1, Pieter C Dorrestein, Bradley S Moore.   

Abstract

A chemoenzymatic approach to generate fully functional acyl coenzyme A molecules that are then used as substrates to drive in situ acyl transfer reactions is described. Mass spectrometry based assays to verify the identity of acyl coenzyme A enzymatic products are also illustrated. The approach is responsive to a diverse array of carboxylic acids that can be elaborated to their corresponding coenzyme A thioesters, with potential applications in wide-ranging chemical biology studies that utilize acyl coenzyme A substrates.

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Year:  2015        PMID: 26333306      PMCID: PMC4720141          DOI: 10.1021/acs.orglett.5b02113

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  13 in total

Review 1.  Polyketide and nonribosomal peptide antibiotics: modularity and versatility.

Authors:  Christopher T Walsh
Journal:  Science       Date:  2004-03-19       Impact factor: 47.728

Review 2.  Coenzyme A: back in action.

Authors:  Roberta Leonardi; Yong-Mei Zhang; Charles O Rock; Suzanne Jackowski
Journal:  Prog Lipid Res       Date:  2005-04-20       Impact factor: 16.195

3.  One-pot chemo-enzymatic synthesis of reporter-modified proteins.

Authors:  Andrew S Worthington; Michael D Burkart
Journal:  Org Biomol Chem       Date:  2005-11-24       Impact factor: 3.876

Review 4.  Dissecting non-ribosomal and polyketide biosynthetic machineries using electrospray ionization Fourier-Transform mass spectrometry.

Authors:  Pieter C Dorrestein; Neil L Kelleher
Journal:  Nat Prod Rep       Date:  2006-09-28       Impact factor: 13.423

Review 5.  Amino acid-protecting groups.

Authors:  Albert Isidro-Llobet; Mercedes Alvarez; Fernando Albericio
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

Review 6.  The phosphopantetheinyl transferases: catalysis of a post-translational modification crucial for life.

Authors:  Joris Beld; Eva C Sonnenschein; Christopher R Vickery; Joseph P Noel; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2014-01       Impact factor: 13.423

7.  Discovery of small molecule vanin inhibitors: new tools to study metabolism and disease.

Authors:  Patrick A M Jansen; Janna A van Diepen; Bas Ritzen; Patrick L J M Zeeuwen; Ivana Cacciatore; Catia Cornacchia; Ivonne M J J van Vlijmen-Willems; Erik de Heuvel; Peter N M Botman; Richard H Blaauw; Pedro H H Hermkens; Floris P J T Rutjes; Joost Schalkwijk
Journal:  ACS Chem Biol       Date:  2013-01-02       Impact factor: 5.100

8.  The antibiotic activity of N-pentylpantothenamide results from its conversion to ethyldethia-coenzyme a, a coenzyme a antimetabolite.

Authors:  Erick Strauss; Tadhg P Begley
Journal:  J Biol Chem       Date:  2002-10-07       Impact factor: 5.157

9.  Stereocontrolled syntheses of peptide thioesters containing modified seryl residues as probes of antibiotic biosynthesis.

Authors:  Nicole M Gaudelli; Craig A Townsend
Journal:  J Org Chem       Date:  2013-06-18       Impact factor: 4.354

10.  Biosynthesis of polybrominated aromatic organic compounds by marine bacteria.

Authors:  Vinayak Agarwal; Abrahim A El Gamal; Kazuya Yamanaka; Dennis Poth; Roland D Kersten; Michelle Schorn; Eric E Allen; Bradley S Moore
Journal:  Nat Chem Biol       Date:  2014-06-29       Impact factor: 15.040

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  9 in total

1.  Insights into β-ketoacyl-chain recognition for β-ketoacyl-ACP utilizing AHL synthases.

Authors:  Mila Nhu Lam; Dastagiri Dudekula; Bri Durham; Noah Collingwood; Eric C Brown; Rajesh Nagarajan
Journal:  Chem Commun (Camb)       Date:  2018-08-07       Impact factor: 6.222

Review 2.  Enzymatic Halogenation and Dehalogenation Reactions: Pervasive and Mechanistically Diverse.

Authors:  Vinayak Agarwal; Zachary D Miles; Jaclyn M Winter; Alessandra S Eustáquio; Abrahim A El Gamal; Bradley S Moore
Journal:  Chem Rev       Date:  2017-01-20       Impact factor: 60.622

3.  Ecological implications of hypoxia-triggered shifts in secondary metabolism.

Authors:  Kelley A Gallagher; Greg Wanger; Jane Henderson; Mark Llorente; Chambers C Hughes; Paul R Jensen
Journal:  Environ Microbiol       Date:  2017-03-21       Impact factor: 5.491

4.  Aminoacyl chain translocation catalysed by a type II thioesterase domain in an unusual non-ribosomal peptide synthetase.

Authors:  Shan Wang; William D G Brittain; Qian Zhang; Zhou Lu; Ming Him Tong; Kewen Wu; Kwaku Kyeremeh; Matthew Jenner; Yi Yu; Steven L Cobb; Hai Deng
Journal:  Nat Commun       Date:  2022-01-10       Impact factor: 17.694

5.  Biosynthesis of coral settlement cue tetrabromopyrrole in marine bacteria by a uniquely adapted brominase-thioesterase enzyme pair.

Authors:  Abrahim El Gamal; Vinayak Agarwal; Stefan Diethelm; Imran Rahman; Michelle A Schorn; Jennifer M Sneed; Gordon V Louie; Kristen E Whalen; Tracy J Mincer; Joseph P Noel; Valerie J Paul; Bradley S Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-21       Impact factor: 11.205

6.  A Peptidyl-Transesterifying Type I Thioesterase in Salinamide Biosynthesis.

Authors:  Lauren Ray; Kazuya Yamanaka; Bradley S Moore
Journal:  Angew Chem Int Ed Engl       Date:  2015-11-10       Impact factor: 15.336

7.  Acyl-group specificity of AHL synthases involved in quorum-sensing in Roseobacter group bacteria.

Authors:  Lisa Ziesche; Jan Rinkel; Jeroen S Dickschat; Stefan Schulz
Journal:  Beilstein J Org Chem       Date:  2018-06-05       Impact factor: 2.883

8.  Enzymatic assembly of the salinosporamide γ-lactam-β-lactone anticancer warhead.

Authors:  Katherine D Bauman; Vikram V Shende; Percival Yang-Ting Chen; Daniela B B Trivella; Tobias A M Gulder; Sreekumar Vellalath; Daniel Romo; Bradley S Moore
Journal:  Nat Chem Biol       Date:  2022-03-21       Impact factor: 16.174

9.  Acetyl-4'-phosphopantetheine is stable in serum and prevents phenotypes induced by pantothenate kinase deficiency.

Authors:  Ivano Di Meo; Cristina Colombelli; Balaji Srinivasan; Marianne de Villiers; Jeffrey Hamada; Suh Y Jeong; Rachel Fox; Randall L Woltjer; Pieter G Tepper; Liza L Lahaye; Emanuela Rizzetto; Clara H Harrs; Theo de Boer; Marianne van der Zwaag; Branko Jenko; Alen Čusak; Jerca Pahor; Gregor Kosec; Nicola A Grzeschik; Susan J Hayflick; Valeria Tiranti; Ody C M Sibon
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

  9 in total

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