Literature DB >> 23758494

Stereocontrolled syntheses of peptide thioesters containing modified seryl residues as probes of antibiotic biosynthesis.

Nicole M Gaudelli1, Craig A Townsend.   

Abstract

Methods have been developed to synthesize tri- and pentapeptide thioesters containing one or more p-(hydroxyphenyl)glycine (pHPG) residues and L-serine, some where the latter is O-phosphorylated, O-acetylated, or exists as a β-lactam. Selection of orthogonal protection strategies and development of conditions to achieve seryl O-phosphorylation without β-elimination and to maintain stereochemical control, especially simultaneously at exceptionally base-labile pHPG α-carbons, are described. Intramolecular closure of a seryl peptide to a β-lactam-containing peptide and the syntheses of corresponding thioester analogues are also reported. Modification of classical Mitsunobu conditions is described in the synthesis of the β-lactam-containing products, and in a broadly useful observation, it was found that simple exclusion of light from the P(OEt)3-mediated Mitsunobu ring closure afforded yields of >95%, presumably owing to reduced photodegradation of the azodicarboxylate used. These sensitive potential substrates and products will be used in mechanistic studies of the two nonribosomal peptide synthetases NocA and NocB that lie at the heart of nocardicin biosynthesis, a family of monocyclic β-lactam antibiotics.

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Year:  2013        PMID: 23758494      PMCID: PMC3898789          DOI: 10.1021/jo4007893

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  17 in total

Review 1.  Tailoring enzymes that modify nonribosomal peptides during and after chain elongation on NRPS assembly lines.

Authors:  C T Walsh; H Chen; T A Keating; B K Hubbard; H C Losey; L Luo; C G Marshall; D A Miller; H M Patel
Journal:  Curr Opin Chem Biol       Date:  2001-10       Impact factor: 8.822

2.  Peptide cyclization catalysed by the thioesterase domain of tyrocidine synthetase.

Authors:  J W Trauger; R M Kohli; H D Mootz; M A Marahiel; C T Walsh
Journal:  Nature       Date:  2000-09-14       Impact factor: 49.962

Review 3.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

4.  In vivo characterization of nonribosomal peptide synthetases NocA and NocB in the biosynthesis of nocardicin A.

Authors:  Jeanne M Davidsen; Craig A Townsend
Journal:  Chem Biol       Date:  2012-02-24

5.  Aminoacyl-SNACs as small-molecule substrates for the condensation domains of nonribosomal peptide synthetases.

Authors:  D E Ehmann; J W Trauger; T Stachelhaus; C T Walsh
Journal:  Chem Biol       Date:  2000-10

6.  COMU: a safer and more effective replacement for benzotriazole-based uronium coupling reagents.

Authors:  Ayman El-Faham; Ramon Subirós Funosas; Rafel Prohens; Fernando Albericio
Journal:  Chemistry       Date:  2009-09-21       Impact factor: 5.236

7.  Non-ribosomal propeptide precursor in nocardicin A biosynthesis predicted from adenylation domain specificity dependent on the MbtH family protein NocI.

Authors:  Jeanne M Davidsen; David M Bartley; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-01-18       Impact factor: 15.419

8.  Studies on the role of tetrazole in the activation of phosphoramidites.

Authors:  S Berner; K Mühlegger; H Seliger
Journal:  Nucleic Acids Res       Date:  1989-02-11       Impact factor: 16.971

Review 9.  The enzymes of β-lactam biosynthesis.

Authors:  Refaat B Hamed; J Ruben Gomez-Castellanos; Luc Henry; Christian Ducho; Michael A McDonough; Christopher J Schofield
Journal:  Nat Prod Rep       Date:  2013-01       Impact factor: 13.423

Review 10.  Amide bond formation: beyond the myth of coupling reagents.

Authors:  Eric Valeur; Mark Bradley
Journal:  Chem Soc Rev       Date:  2008-12-04       Impact factor: 54.564

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  7 in total

1.  Late-Stage Conversion of Diphenylphosphonate to Fluorophosphonate Probes for the Investigation of Serine Hydrolases.

Authors:  Felipe B d'Andrea; Craig A Townsend
Journal:  Cell Chem Biol       Date:  2019-04-11       Impact factor: 8.116

Review 2.  Convergent biosynthetic pathways to β-lactam antibiotics.

Authors:  Craig A Townsend
Journal:  Curr Opin Chem Biol       Date:  2016-09-29       Impact factor: 8.822

3.  Chemoenzymatic Synthesis of Acyl Coenzyme A Substrates Enables in Situ Labeling of Small Molecules and Proteins.

Authors:  Vinayak Agarwal; Stefan Diethelm; Lauren Ray; Neha Garg; Takayoshi Awakawa; Pieter C Dorrestein; Bradley S Moore
Journal:  Org Lett       Date:  2015-09-03       Impact factor: 6.005

4.  Substrate selectivity of an isolated enoyl reductase catalytic domain from an iterative highly reducing fungal polyketide synthase reveals key components of programming.

Authors:  Douglas M Roberts; Christoph Bartel; Alan Scott; David Ivison; Thomas J Simpson; Russell J Cox
Journal:  Chem Sci       Date:  2016-09-26       Impact factor: 9.825

5.  Acyl-group specificity of AHL synthases involved in quorum-sensing in Roseobacter group bacteria.

Authors:  Lisa Ziesche; Jan Rinkel; Jeroen S Dickschat; Stefan Schulz
Journal:  Beilstein J Org Chem       Date:  2018-06-05       Impact factor: 2.883

6.  Structure of a bound peptide phosphonate reveals the mechanism of nocardicin bifunctional thioesterase epimerase-hydrolase half-reactions.

Authors:  Ketan D Patel; Felipe B d'Andrea; Nicole M Gaudelli; Andrew R Buller; Craig A Townsend; Andrew M Gulick
Journal:  Nat Commun       Date:  2019-08-27       Impact factor: 14.919

7.  Epimerization and substrate gating by a TE domain in β-lactam antibiotic biosynthesis.

Authors:  Nicole M Gaudelli; Craig A Townsend
Journal:  Nat Chem Biol       Date:  2014-02-16       Impact factor: 15.040

  7 in total

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