Literature DB >> 26332284

A Microfluidic Platform for Long-Term Monitoring of Algae in a Dynamic Environment.

Chung Sze Luke1, Jangir Selimkhanov1, Leo Baumgart2, Susan E Cohen2,3, Susan S Golden2,3, Natalie A Cookson4, Jeff Hasty1,2,4.   

Abstract

Culturing cells in microfluidic "lab-on-a-chip" devices for time lapse microscopy has become a valuable tool for studying the dynamics of biological systems. Although microfluidic technology has been applied to culturing and monitoring a diverse range of bacterial and eukaryotic species, cyanobacteria and eukaryotic microalgae present several challenges that have made them difficult to culture in a microfluidic setting. Here, we present a customizable device for the long-term culturing and imaging of three well characterized strains of cyanobacteria and microalgae. This platform has several advantages over agarose pads and demonstrates great potential for obtaining high quality, single-cell gene expression data of cyanobacteria and algae in precisely controlled, dynamic environments over long time periods.

Entities:  

Keywords:  Chlorella; Synechococcus; Synechocystis; cyanobacteria; dynamics; microfluidics

Mesh:

Substances:

Year:  2015        PMID: 26332284      PMCID: PMC5249263          DOI: 10.1021/acssynbio.5b00094

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  20 in total

1.  Resilient circadian oscillator revealed in individual cyanobacteria.

Authors:  Irina Mihalcescu; Weihong Hsing; Stanislas Leibler
Journal:  Nature       Date:  2004-07-01       Impact factor: 49.962

2.  A change in the sensitivity of elongation factor G to oxidation protects photosystem II from photoinhibition in Synechocystis sp. PCC 6803.

Authors:  Kayoko Ejima; Tomoko Kawaharada; Shuhei Inoue; Kouji Kojima; Yoshitaka Nishiyama
Journal:  FEBS Lett       Date:  2012-01-28       Impact factor: 4.124

Review 3.  Photoinhibition of photosystem II under environmental stress.

Authors:  Norio Murata; Shunichi Takahashi; Yoshitaka Nishiyama; Suleyman I Allakhverdiev
Journal:  Biochim Biophys Acta       Date:  2006-12-06

4.  Screening, growth medium optimisation and heterotrophic cultivation of microalgae for biodiesel production.

Authors:  Zongchao Jia; Ying Liu; Maurycy Daroch; Shu Geng; Jay J Cheng
Journal:  Appl Biochem Biotechnol       Date:  2014-05-21       Impact factor: 2.926

Review 5.  The present and future role of microfluidics in biomedical research.

Authors:  Eric K Sackmann; Anna L Fulton; David J Beebe
Journal:  Nature       Date:  2014-03-13       Impact factor: 49.962

Review 6.  Microfluidic devices for measuring gene network dynamics in single cells.

Authors:  Matthew R Bennett; Jeff Hasty
Journal:  Nat Rev Genet       Date:  2009-08-11       Impact factor: 53.242

7.  Design and characterization of molecular tools for a Synthetic Biology approach towards developing cyanobacterial biotechnology.

Authors:  Hsin-Ho Huang; Daniel Camsund; Peter Lindblad; Thorsten Heidorn
Journal:  Nucleic Acids Res       Date:  2010-03-17       Impact factor: 16.971

Review 8.  Microfluidic systems for studying neurotransmitters and neurotransmission.

Authors:  Callie A Croushore; Jonathan V Sweedler
Journal:  Lab Chip       Date:  2013-05-07       Impact factor: 6.799

9.  Robust circadian oscillations in growing cyanobacteria require transcriptional feedback.

Authors:  Shu-Wen Teng; Shankar Mukherji; Jeffrey R Moffitt; Sophie de Buyl; Erin K O'Shea
Journal:  Science       Date:  2013-05-10       Impact factor: 47.728

10.  Application of synthetic biology in cyanobacteria and algae.

Authors:  Bo Wang; Jiangxin Wang; Weiwen Zhang; Deirdre R Meldrum
Journal:  Front Microbiol       Date:  2012-09-19       Impact factor: 5.640

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  11 in total

1.  Mechanical regulation of photosynthesis in cyanobacteria.

Authors:  Kristin A Moore; Sabina Altus; Jian W Tay; Janet B Meehl; Evan B Johnson; David M Bortz; Jeffrey C Cameron
Journal:  Nat Microbiol       Date:  2020-03-23       Impact factor: 17.745

2.  PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae.

Authors:  Lars Behrendt; M Mehdi Salek; Erik L Trampe; Vicente I Fernandez; Kang Soo Lee; Michael Kühl; Roman Stocker
Journal:  Sci Adv       Date:  2020-09-02       Impact factor: 14.136

Review 3.  Microfluidic and mathematical modeling of aquatic microbial communities.

Authors:  Fangchen Liu; Andrea Giometto; Mingming Wu
Journal:  Anal Bioanal Chem       Date:  2020-11-26       Impact factor: 4.142

4.  Enhancement of microalgae growth using magnetic artificial cilia.

Authors:  Thijn Verburg; Allison Schaap; Shuaizhong Zhang; Jaap den Toonder; Ye Wang
Journal:  Biotechnol Bioeng       Date:  2021-04-08       Impact factor: 4.530

Review 5.  Review of Microfluidic Photobioreactor Technology for Metabolic Engineering and Synthetic Biology of Cyanobacteria and Microalgae.

Authors:  Ya-Tang Yang; Chun Ying Wang
Journal:  Micromachines (Basel)       Date:  2016-10-11       Impact factor: 2.891

6.  A microfluidic photobioreactor for simultaneous observation and cultivation of single microalgal cells or cell aggregates.

Authors:  Christoph Westerwalbesloh; Carl Brehl; Sophie Weber; Christopher Probst; Janka Widzgowski; Alexander Grünberger; Christian Pfaff; Ladislav Nedbal; Dietrich Kohlheyer
Journal:  PLoS One       Date:  2019-04-29       Impact factor: 3.240

Review 7.  Microfluidic technology for plankton research.

Authors:  Mathias Girault; Thomas Beneyton; Yolanda Del Amo; Jean-Christophe Baret
Journal:  Curr Opin Biotechnol       Date:  2018-10-13       Impact factor: 9.740

8.  A Low-Cost Microfluidic Method for Microplastics Identification: Towards Continuous Recognition.

Authors:  Pedro Mesquita; Liyuan Gong; Yang Lin
Journal:  Micromachines (Basel)       Date:  2022-03-23       Impact factor: 3.523

9.  Mechanically activated artificial cell by using microfluidics.

Authors:  Kenneth K Y Ho; Lap Man Lee; Allen P Liu
Journal:  Sci Rep       Date:  2016-09-09       Impact factor: 4.379

Review 10.  Microfluidic Microalgae System: A Review.

Authors:  Anand Baby Alias; Shubhanvit Mishra; Gaurav Pendharkar; Chi-Shuo Chen; Cheng-Hsien Liu; Yi-Ju Liu; Da-Jeng Yao
Journal:  Molecules       Date:  2022-03-15       Impact factor: 4.411

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