| Literature DB >> 26322307 |
Christian Kohl1, Geoff Frampton2, Jeremy Sweet3, Armin Spök4, Neal Robert Haddaway5, Ralf Wilhelm1, Stefan Unger6, Joachim Schiemann1.
Abstract
Systematic reviews represent powerful tools to identify, collect, synthesize, and evaluate primary research data on specific research questions in a highly standardized and reproducible manner. They enable the defensible synthesis of outcomes by increasing precision and minimizing bias whilst ensuring transparency of the methods used. This makes them especially valuable to inform evidence-based risk analysis and decision making in various topics and research disciplines. Although seen as a "gold standard" for synthesizing primary research data, systematic reviews are not without limitations as they are often cost, labor and time intensive and the utility of synthesis outcomes depends upon the availability of sufficient and robust primary research data. In this paper, we (1) consider the added value systematic reviews could provide when synthesizing primary research data on genetically modified organisms (GMO) and (2) critically assess the adequacy and feasibility of systematic review for collating and analyzing data on potential impacts of GMOs in order to better inform specific steps within GMO risk assessment and risk management. The regulatory framework of the EU is used as an example, although the issues we discuss are likely to be more widely applicable.Entities:
Keywords: GMO; bias; evidence synthesis; risk assessment; risk management; systematic review
Year: 2015 PMID: 26322307 PMCID: PMC4533014 DOI: 10.3389/fbioe.2015.00113
Source DB: PubMed Journal: Front Bioeng Biotechnol ISSN: 2296-4185
Core steps in the conduct of a systematic review.
| Steps of the systematic review | Key procedures |
|---|---|
| 1. Preparing the review | The review question is clearly specified and a protocol detailing the review methods is developed. The protocol should be subject to peer review and could include stakeholder involvement in its development or peer review |
| 2. Searching for evidence | An extensive search is conducted based on a pre-specified search strategy which aims to identify all relevant evidence, reducing the risk of selection bias |
| 3. Selecting studies for inclusion or exclusion in the review | The identified evidence is assessed against eligibility criteria specified in the protocol to ensure that only appropriate evidence is included in the review, reducing risk of bias from selective evidence inclusion |
| 4. Collecting data from the included studies and creating evidence tables | Data are collected from the included studies using a standard, pilot-tested form to ensure that only relevant data are extracted, in a way that minimizes errors |
| 5. Assessing methodological rigor of included studies | The primary research studies are critically assessed for study rigor, in particular any methodological aspects that could lead to risk of bias (referred to as internal validity) or issues of generalizability (referred to as external validity) |
| 6. Synthesizing data from included studies, possibly including meta-analysis | Pooling of quantitative outcomes across similar primary studies may be conducted to improve precision of the answer, subject to the studies meeting adequate pre-specified standards of rigor |
| 7. Presenting data and results | Presentation of results is transparent, including a clear specification of the reasons why studies were excluded from the review and clear specification of how the analysis was conducted, including how any studies at risk of bias were handled |
| 8. Interpreting results and drawing conclusions | The interpretation of qualitative and/or quantitative results takes into account any limitations of the included primary studies as well as any limitations of the review process. Stakeholders could be involved, e.g., if the draft systematic review report is circulated among stakeholders for comment. Implications for research/policy/practice are provided but reviews should ensure that these do not over-reach the review findings |
Comparison of key aspects of traditional reviews and systematic reviews.
| Traditional “narrative” reviews | Systematic reviews | Reasons why systematic reviews may be advantageous for synthesizing evidence compared to non-systematic traditional (narrative) reviews | |
|---|---|---|---|
| Review question | Often broad in scope | Focused and explicit | The question is focused and a systematic review directly answers it, based on evidence identified explicitly as being the most relevant and robust |
| Criteria for inclusion or exclusion of studies | Not always explicitly stated | Pre-defined and documented; applied in a verifiable manner | The scope of the evidence is explicitly clear, meaning that evidence cannot be gathered selectively (systematic reviews reduce bias), irrelevant evidence is avoided (systematic reviews ensure efficiency), criteria are pre-defined (systematic reviews enable stakeholder involvement), and the criteria and process aim to be objective (systematic reviews reduce ambiguity or subjectivity of interpretation) |
| Review method | Seldom reported | Reported and also pre-defined in a protocol | By explicitly and transparently reporting how and why evidence is collected, the synthesis can be clearly defensible, reproducible, and may be readily updated. Being a systematic and standard approach, the robustness of systematic reviews can be easily checked |
| Literature search | Not always extensive | Structured to identify as many relevant studies as possible | All relevant evidence is considered (systematic reviews identify and/or minimize publication bias) or, in cases where evidence is not included (e.g., confidential data) this can be made explicit so as to fully inform interpretation |
| Methodological critical appraisal of included studies | Variable | Included, typically using a critical appraisal tool | Critical appraisal of the included evidence can ensure that systematic review findings reflect the truth in terms of their magnitude and direction (i.e., bias is minimized) with an appropriate degree of certainty – i.e., the estimates of outcomes and their precision levels are both valid. This is an important ‘filter’ in evidence synthesis that enables less rigorous evidence to be identified and handled appropriately |
| Critical appraisal example: reporting of study outcomes | Selective reporting; often of study author’s interpretation | Full reporting of relevant outcomes (numerical results) | By exposing and/or controlling for selective reporting, systematic reviews can minimize reporting bias which could be a problem in cases where stakeholders have vested interests in certain outcomes |
| Synthesis | Usually narrative, sometimes selective | Quantitative synthesis (meta-analysis) when possible | Where possible, systematic reviews make use of the best available evidence to improve precision of the answer; explicit exploration of assumptions and limitations is possible, e.g., in sensitivity analyses |
Systematic reviews and their adequacy to inform GMO risk assessment and risk management.
| Steps in GMO risk assessment and risk management according to EFSA (EFSA, | Data typically informing each step | Added value of SR methodology | Challenges/limitations for SR performance |
|---|---|---|---|
| Crop/trait/event and related management systems |
Sufficient primary research data would have to be available for a SR to be worthwhile and add value, which is not likely for novel traits/events or rarely used events Could be time/labor/cost intensive depending upon the size of the evidence base Question prioritization (based on problem formulation and/or conceptual models) might be needed | ||
|
Identification of characteristics of the GMO that might cause potential adverse effects Identification of exposure pathways Definition of assessment endpoints Formulation of testable hypotheses to frame subsequent RA steps Elaboration of analysis plans |
Increase precision Minimize bias Ensure transparency Facilitate stakeholder involvement Clarify uncertainty | ||
|
SR could support a rigorous evaluation of relevant parameters, e.g., assessment endpoints and exposure pathways (if sufficient literature reporting relevant parameters exists, the reliability of the parameter estimates could be assessed and precision of the final estimate employed in the RA, improved by quantitative pooling where appropriate) SR could provide defensible answers to support decisions when framing the scope of subsequent RA steps SR could support targeted communication between assessors (and other stakeholders), by providing information in a standardized, well-structured way | |||
|
SR do not generally synthesize expert opinions; however, expert opinions are often valuable in setting the review question and developing the protocol and might contribute to decisions regarding the prioritization of different review questions | |||
| Event/trait and related management systems |
Sufficient primary research data would have to be available for a SR to be worthwhile and add value, which is not likely for novel traits/events or rarely used events Could be time/labor/cost intensive depending upon the size of the evidence base Question prioritization might be needed | ||
|
Qualitative and/or quantitative evaluation of potential adverse effects Quantitative estimation of the likelihood of exposure |
Increase precision Minimize bias Ensure transparency Facilitate stakeholder involvement Clarify uncertainty | ||
|
SR (including meta-analysis) could provide valid quantitative estimates with known precision regarding the intensity or likelihood of a hazard SR could support a targeted communication between assessors (and other stakeholders), by providing information in a standardized, well-structured way | |||
| Event/trait and related management systems |
SR would be unlikely to add value here, since this step determines and quantifies risks based on data collected, analyzed, and interpreted at the previous steps |
Not applicable | |
|
Qualitative and/or (semi-) quantitative estimation, including attendant uncertainties of the probability of occurrence and severity of known or potential adverse effects | |||
| Crop/trait/event and related management systems |
Could be time/labor/cost intensive depending upon the size of the evidence base Primary data have to be available and accessible Question prioritization might be needed | ||
|
Reduce the identified risks to a level of no concern and consider defined areas of uncertainty When possible the reduction of risk should be quantified The reliability and efficiency of risk management characteristics should be assessed |
Increase precision Minimize bias Ensure transparency Facilitate stakeholder involvement Clarify uncertainty | ||
|
SR may support a rigorous evaluation of risk management measures and strategies SR could support a targeted communication on assessment details between assessors (and other stakeholders), by providing information in a standardized, well-structured way | |||
| Event and related management systems |
SR would be unlikely to add value here, since this step draws conclusions about an overall risk posed by a GMO, based on data collected, analyzed, and interpreted at the previous steps |
Not applicable | |
|
Evaluation of the overall risk | |||
| Trait/event and related management systems |
Updating an existing SR might be time/labor/cost intensive if a large amount of new information has to be included If a SR addressing a specific question does not already exist conducting a full new SR could be time/labor/cost intensive Primary data have to be available and accessible Question prioritization might be needed | ||
|
Case-specific monitoring General surveillance: tracking system states after market release of a GMO to anticipate cumulative and unintended effects |
Increase precision Minimize bias Ensure transparency Facilitate stakeholder involvement Ensure updatability Clarify uncertainty | ||
|
SR (including meta-analysis) could provide valid quantitative (or qualitative) estimates of relevant outcomes with known precision A SR could facilitate integration and weighing of new studies by providing a consistent and transparent evaluation scheme that is readily updatable |
The external applicability of information from existing monitoring networks might be questionable; if so this would have limited value for GMO RA | ||
| Event |
Depending on the amount of new information, a timely answer might not be possible Primary data have to be available and accessible | ||
|
Determine the need for RA update based on new available evidence |
Increase precision Minimize bias Ensure transparency Ensure updatability Clarify uncertainty | ||
|
Weighing of the information and assessment of its impact on previous risk/safety conclusions (e.g., via sensitivity analysis) Communication about possible shortcomings affecting the reliability of the new information, facilitated by SR since relevant information is provided in a structured, standardized way, including objective critical appraisal | |||
This table illustrates the different risk assessment (RA) and risk management (RM) steps which use scientific research data in order to conclude about the safety of a genetically modified organism (GMO). It identifies the nature of the considered data, the possible added value provided by systematic reviews (SR), and depicts the challenges and limits for their conduct.