Literature DB >> 26311665

The ecology of microscopic life in household dust.

Albert Barberán, Robert R Dunn, Brian J Reich, Krishna Pacifici, Eric B Laber, Holly L Menninger, James M Morton, Jessica B Henley, Jonathan W Leff, Shelly L Miller, Noah Fierer.   

Abstract

We spend the majority of our lives indoors; yet, we currently lack a comprehensive understanding of how the microbial communities found in homes vary across broad geographical regions and what factors are most important in shaping the types of microorganisms found inside homes. Here, we investigated the fungal and bacterial communities found in settled dust collected from inside and outside approximately 1200 homes located across the continental US, homes that represent a broad range of home designs and span many climatic zones. Indoor and outdoor dust samples harboured distinct microbial communities, but these differences were larger for bacteria than for fungi with most indoor fungi originating outside the home. Indoor fungal communities and the distribution of potential allergens varied predictably across climate and geographical regions; where you live determines what fungi live with you inside your home. By contrast, bacterial communities in indoor dust were more strongly influenced by the number and types of occupants living in the homes. In particular, the female : male ratio and whether a house had pets had a significant influence on the types of bacteria found inside our homes highlighting that who you live with determines what bacteria are found inside your home.

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Year:  2015        PMID: 26311665      PMCID: PMC4571696          DOI: 10.1098/rspb.2015.1139

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  52 in total

Review 1.  Bioaerosol health effects and exposure assessment: progress and prospects.

Authors:  J Douwes; P Thorne; N Pearce; D Heederik
Journal:  Ann Occup Hyg       Date:  2003-04

2.  Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children.

Authors:  K C Dannemiller; J F Gent; B P Leaderer; J Peccia
Journal:  Indoor Air       Date:  2015-04-17       Impact factor: 5.770

3.  UPARSE: highly accurate OTU sequences from microbial amplicon reads.

Authors:  Robert C Edgar
Journal:  Nat Methods       Date:  2013-08-18       Impact factor: 28.547

4.  Exposure to environmental microorganisms and childhood asthma.

Authors:  Markus J Ege; Melanie Mayer; Anne-Cécile Normand; Jon Genuneit; William O C M Cookson; Charlotte Braun-Fahrländer; Dick Heederik; Renaud Piarroux; Erika von Mutius
Journal:  N Engl J Med       Date:  2011-02-24       Impact factor: 91.245

5.  Airborne microbial contaminants in indoor environments. Naturally ventilated and air-conditioned homes.

Authors:  A M Kodama; R I McGee
Journal:  Arch Environ Health       Date:  1986 Sep-Oct

6.  Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics.

Authors:  Anthony S Amend; Keith A Seifert; Robert Samson; Thomas D Bruns
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-28       Impact factor: 11.205

Review 7.  The human gut microbiome: ecology and recent evolutionary changes.

Authors:  Jens Walter; Ruth Ley
Journal:  Annu Rev Microbiol       Date:  2011       Impact factor: 15.500

8.  Key determinants of the fungal and bacterial microbiomes in homes.

Authors:  Eric M Kettleson; Atin Adhikari; Stephen Vesper; Kanistha Coombs; Reshmi Indugula; Tiina Reponen
Journal:  Environ Res       Date:  2015-02-20       Impact factor: 6.498

9.  Man's best friend? The effect of pet ownership on house dust microbial communities.

Authors:  Kei E Fujimura; Christine C Johnson; Dennis R Ownby; Michael J Cox; Eoin L Brodie; Suzanne L Havstad; Edward M Zoratti; Kimberley J Woodcroft; Kevin R Bobbitt; Ganesa Wegienka; Homer A Boushey; Susan V Lynch
Journal:  J Allergy Clin Immunol       Date:  2010-07-14       Impact factor: 10.793

10.  Phylogenetic characterization of fecal microbial communities of dogs fed diets with or without supplemental dietary fiber using 454 pyrosequencing.

Authors:  Ingmar S Middelbos; Brittany M Vester Boler; Ani Qu; Bryan A White; Kelly S Swanson; George C Fahey
Journal:  PLoS One       Date:  2010-03-22       Impact factor: 3.240

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  72 in total

1.  Subgroup differences in the associations between dog exposure during the first year of life and early life allergic outcomes.

Authors:  G Wegienka; S Havstad; H Kim; E Zoratti; D Ownby; K J Woodcroft; C C Johnson
Journal:  Clin Exp Allergy       Date:  2016-10-10       Impact factor: 5.018

2.  Dog introduction alters the home dust microbiota.

Authors:  A R Sitarik; S Havstad; A M Levin; S V Lynch; K E Fujimura; D R Ownby; C C Johnson; G Wegienka
Journal:  Indoor Air       Date:  2018-03-13       Impact factor: 5.770

Review 3.  Birth Mode, Breastfeeding, Pet Exposure, and Antibiotic Use: Associations With the Gut Microbiome and Sensitization in Children.

Authors:  Haejin Kim; Alexandra R Sitarik; Kimberley Woodcroft; Christine Cole Johnson; Edward Zoratti
Journal:  Curr Allergy Asthma Rep       Date:  2019-03-11       Impact factor: 4.806

4.  Visualizing the invisible: class excursions to ignite children's enthusiasm for microbes.

Authors:  Terry J McGenity; Amare Gessesse; John E Hallsworth; Esther Garcia Cela; Carol Verheecke-Vaessen; Fengping Wang; Max Chavarría; Max M Haggblom; Søren Molin; Antoine Danchin; Eddy J Smid; Cédric Lood; Charles S Cockell; Corinne Whitby; Shuang-Jiang Liu; Nancy P Keller; Lisa Y Stein; Seth R Bordenstein; Rup Lal; Olga C Nunes; Lone Gram; Brajesh K Singh; Nicole S Webster; Cindy Morris; Sharon Sivinski; Saskia Bindschedler; Pilar Junier; André Antunes; Bonnie K Baxter; Paola Scavone; Kenneth Timmis
Journal:  Microb Biotechnol       Date:  2020-05-14       Impact factor: 5.813

5.  Early Exposure to Animals and Childhood Body Mass Index Percentile and Percentage Fat Mass.

Authors:  Pamela L Ferguson; Sarah Commodore; Brian Neelon; JacKetta Cobbs; Anthony C Sciscione; William A Grobman; Roger B Newman; Alan T Tita; Michael P Nageotte; Kristy Palomares; Daniel W Skupski; John E Vena; Kelly J Hunt
Journal:  Child Adolesc Obes       Date:  2022-01-13

6.  Allergies and Asthma: Do Atopic Disorders Result from Inadequate Immune Homeostasis arising from Infant Gut Dysbiosis?

Authors:  Christine C Johnson; Dennis R Ownby
Journal:  Expert Rev Clin Immunol       Date:  2016-02-07       Impact factor: 4.473

7.  Azteca ants maintain unique microbiomes across functionally distinct nest chambers.

Authors:  Jane M Lucas; Anne A Madden; Clint A Penick; Mary Jane Epps; Peter R Marting; Julia L Stevens; Daniel J Fergus; Robert R Dunn; Emily K Meineke
Journal:  Proc Biol Sci       Date:  2019-08-07       Impact factor: 5.349

Review 8.  Indoor Fungal Exposure and Allergic Respiratory Disease.

Authors:  Nicholas J Osborne; Christopher R Thornton; Richard A Sharpe
Journal:  Curr Allergy Asthma Rep       Date:  2015-12       Impact factor: 4.806

9.  Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits.

Authors:  Jonathan W Leff; Richard D Bardgett; Anna Wilkinson; Benjamin G Jackson; William J Pritchard; Jonathan R De Long; Simon Oakley; Kelly E Mason; Nicholas J Ostle; David Johnson; Elizabeth M Baggs; Noah Fierer
Journal:  ISME J       Date:  2018-03-09       Impact factor: 10.302

10.  Presence and variability of culturable bioaerosols in three multi-family apartment buildings with different ventilation systems in the Northeastern US.

Authors:  Nirmala T Myers; Leonardo Calderón; Brian Pavilonis; Zuocheng Wang; Youyou Xiong; MaryAnn Sorensen-Allacci; Deborah Plotnik; Jennifer Senick; Jie Gong; Uta Krogmann; Clinton J Andrews; Gediminas Mainelis
Journal:  Indoor Air       Date:  2020-09-30       Impact factor: 5.770

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