Literature DB >> 20616017

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics.

Anthony S Amend1, Keith A Seifert, Robert Samson, Thomas D Bruns.   

Abstract

Fungi are ubiquitous components of indoor human environments, where most contact between humans and microbes occurs. The majority of these organisms apparently play a neutral role, but some are detrimental to human lifestyles and health. Recent studies that used culture-independent sampling methods demonstrated a high diversity of indoor fungi distinct from that of outdoor environments. Others have shown temporal fluctuations of fungal assemblages in human environments and modest correlations with human activity, but global-scale patterns have not been examined, despite the manifest significance of biogeography in other microbial systems. Here we present a global survey of fungi from indoor environments (n = 72), using both taxonomic and phylogeny-informative molecular markers to determine whether global or local indoor factors determine indoor fungal composition. Contrary to common ecological patterns, we show that fungal diversity is significantly higher in temperate zones than in the tropics, with distance from the equator being the best predictor of phylogenetic community similarity. Fungal composition is significantly auto-correlated at the national and hemispheric spatial scales. Remarkably, building function has no significant effect on indoor fungal composition, despite stark contrasts between architecture and materials of some buildings in close proximity. Distribution of individual taxa is significantly range- and latitude-limited compared with a null model of randomized distribution. Our results suggest that factors driving fungal composition are primarily global rather than mediated by building design or function.

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Year:  2010        PMID: 20616017      PMCID: PMC2922287          DOI: 10.1073/pnas.1000454107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Profiles of airborne fungi in buildings and outdoor environments in the United States.

Authors:  Brian G Shelton; Kimberly H Kirkland; W Dana Flanders; George K Morris
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

2.  The relation between fungal propagules in indoor air and home characteristics.

Authors:  P Ren; T M Jankun; K Belanger; M B Bracken; B P Leaderer
Journal:  Allergy       Date:  2001-05       Impact factor: 13.146

Review 3.  Sampling for indoor fungi.

Authors:  Jay M Portnoy; Charles S Barnes; Kevin Kennedy
Journal:  J Allergy Clin Immunol       Date:  2004-02       Impact factor: 10.793

4.  Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.

Authors:  Todd Z DeSantis; Carol E Stone; Sonya R Murray; Jordan P Moberg; Gary L Andersen
Journal:  FEMS Microbiol Lett       Date:  2005-04-15       Impact factor: 2.742

Review 5.  Microbial biogeography: putting microorganisms on the map.

Authors:  Jennifer B Hughes Martiny; Brendan J M Bohannan; James H Brown; Robert K Colwell; Jed A Fuhrman; Jessica L Green; M Claire Horner-Devine; Matthew Kane; Jennifer Adams Krumins; Cheryl R Kuske; Peter J Morin; Shahid Naeem; Lise Ovreås; Anna-Louise Reysenbach; Val H Smith; James T Staley
Journal:  Nat Rev Microbiol       Date:  2006-02       Impact factor: 60.633

6.  The diversity and biogeography of soil bacterial communities.

Authors:  Noah Fierer; Robert B Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

7.  A method for detecting population genetic structure in diverse, high gene-flow species.

Authors:  Ryan P Kelly; Thomas A Oliver; Arjun Sivasundar; Stephen R Palumbi
Journal:  J Hered       Date:  2010-03-10       Impact factor: 2.645

Review 8.  An overview of fungal infections.

Authors:  G Garber
Journal:  Drugs       Date:  2001       Impact factor: 9.546

9.  UniFrac: a new phylogenetic method for comparing microbial communities.

Authors:  Catherine Lozupone; Rob Knight
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

10.  Mold hysteria: origin of the hoax.

Authors:  Christopher Chang; M Eric Gershwin
Journal:  Clin Dev Immunol       Date:  2005-06
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  104 in total

1.  Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air.

Authors:  Naomichi Yamamoto; Kyle Bibby; Jing Qian; Denina Hospodsky; Hamid Rismani-Yazdi; William W Nazaroff; Jordan Peccia
Journal:  ISME J       Date:  2012-04-05       Impact factor: 10.302

2.  Pyrosequencing-derived bacterial, archaeal, and fungal diversity of spacecraft hardware destined for Mars.

Authors:  Myron T La Duc; Parag Vaishampayan; Henrik R Nilsson; Tamas Torok; Kasthuri Venkateswaran
Journal:  Appl Environ Microbiol       Date:  2012-06-22       Impact factor: 4.792

3.  The ecology of microscopic life in household dust.

Authors:  Albert Barberán; Robert R Dunn; Brian J Reich; Krishna Pacifici; Eric B Laber; Holly L Menninger; James M Morton; Jessica B Henley; Jonathan W Leff; Shelly L Miller; Noah Fierer
Journal:  Proc Biol Sci       Date:  2015-09-07       Impact factor: 5.349

4.  Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments.

Authors:  X W Wang; J Houbraken; J Z Groenewald; M Meijer; B Andersen; K F Nielsen; P W Crous; R A Samson
Journal:  Stud Mycol       Date:  2016-12-08       Impact factor: 16.097

5.  Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children.

Authors:  K C Dannemiller; J F Gent; B P Leaderer; J Peccia
Journal:  Indoor Air       Date:  2015-04-17       Impact factor: 5.770

6.  Multiple ITS haplotypes in the genome of the lichenized basidiomycete Cora inversa (Hygrophoraceae): fact or artifact?

Authors:  Robert Lücking; James D Lawrey; Patrick M Gillevet; Masoumeh Sikaroodi; Manuela Dal-Forno; Simon A Berger
Journal:  J Mol Evol       Date:  2013-12-17       Impact factor: 2.395

7.  Comparison of root-associated communities of native and non-native ectomycorrhizal hosts in an urban landscape.

Authors:  K Lothamer; S P Brown; J D Mattox; A Jumpponen
Journal:  Mycorrhiza       Date:  2013-11-13       Impact factor: 3.387

8.  Continental-scale distributions of dust-associated bacteria and fungi.

Authors:  Albert Barberán; Joshua Ladau; Jonathan W Leff; Katherine S Pollard; Holly L Menninger; Robert R Dunn; Noah Fierer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

9.  Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium), and its occurrence in indoor environments and food.

Authors:  A J Chen; V Hubka; J C Frisvad; C M Visagie; J Houbraken; M Meijer; J Varga; R Demirel; Ž Jurjević; A Kubátová; F Sklenář; Y G Zhou; R A Samson
Journal:  Stud Mycol       Date:  2017-07-12       Impact factor: 16.097

10.  Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world.

Authors:  C M Visagie; Y Hirooka; J B Tanney; E Whitfield; K Mwange; M Meijer; A S Amend; K A Seifert; R A Samson
Journal:  Stud Mycol       Date:  2014-06       Impact factor: 16.097

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