Literature DB >> 26303898

A novel gemycircularvirus from experimental rats.

Wang Li1, Yu Gu2, Quan Shen1, Shixing Yang1, Xiaochun Wang1, Yan Wan1, Wen Zhang3.   

Abstract

Recently, gemycircularviruses have been found in humans and various species of animals. Here, a novel gemycircularvirus named Ch-zjrat-01 from blood samples of experimental rats was characterized. The novel gemycircularvirus encodes two major proteins, including a capsid protein (Cap) and a replication-associated protein (Rep). Phylogenetic analysis based on the amino acid sequence of Rep indicated that Ch-zjrat-01 clusters with two gemycircularviruses discovered from bird (KF371635) and mosquito (HQ335086), sharing 48.7 and 49.4 % sequence identities with them, respectively.

Entities:  

Keywords:  Complete genome; Gemycircularvirus; Phylogenetic analysis

Mesh:

Substances:

Year:  2015        PMID: 26303898     DOI: 10.1007/s11262-015-1238-1

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  18 in total

1.  Metagenomic analysis of the viral flora of pine marten and European badger feces.

Authors:  Judith M A van den Brand; Marije van Leeuwen; Claudia M Schapendonk; James H Simon; Bart L Haagmans; Albert D M E Osterhaus; Saskia L Smits
Journal:  J Virol       Date:  2011-12-14       Impact factor: 5.103

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  Characterisation of a diverse range of circular replication-associated protein encoding DNA viruses recovered from a sewage treatment oxidation pond.

Authors:  Simona Kraberger; Gerardo R Argüello-Astorga; Laurence G Greenfield; Craig Galilee; Donald Law; Darren P Martin; Arvind Varsani
Journal:  Infect Genet Evol       Date:  2015-01-09       Impact factor: 3.342

4.  Identification of a single-stranded DNA virus associated with citrus chlorotic dwarf disease, a new member in the family Geminiviridae.

Authors:  Giuliana Loconsole; Pasquale Saldarelli; Harshavardhan Doddapaneni; Vito Savino; Giovanni P Martelli; Maria Saponari
Journal:  Virology       Date:  2012-07-01       Impact factor: 3.616

5.  Identification and molecular characterization of a single-stranded circular DNA virus with similarities to Sclerotinia sclerotiorum hypovirulence-associated DNA virus 1.

Authors:  Zhenguo Du; Yafei Tang; Songbai Zhang; Xiaoman She; Guobing Lan; Arvind Varsani; Zifu He
Journal:  Arch Virol       Date:  2013-12-07       Impact factor: 2.574

6.  Molecular characterisation of a novel cassava associated circular ssDNA virus.

Authors:  Anisha Dayaram; Allen Opong; Anja Jäschke; James Hadfield; Marianna Baschiera; Renwick C J Dobson; Samuel K Offei; Dionne N Shepherd; Darren P Martin; Arvind Varsani
Journal:  Virus Res       Date:  2012-03-23       Impact factor: 3.303

7.  Identification of novel Bromus- and Trifolium-associated circular DNA viruses.

Authors:  Simona Kraberger; Kata Farkas; Pauline Bernardo; Cameron Booker; Gerardo R Argüello-Astorga; François Mesléard; Darren P Martin; Philippe Roumagnac; Arvind Varsani
Journal:  Arch Virol       Date:  2015-02-21       Impact factor: 2.574

8.  Identification of diverse circular single-stranded DNA viruses in adult dragonflies and damselflies (Insecta: Odonata) of Arizona and Oklahoma, USA.

Authors:  Anisha Dayaram; Kristen A Potter; Roberta Pailes; Milen Marinov; Dana D Rosenstein; Arvind Varsani
Journal:  Infect Genet Evol       Date:  2015-01-09       Impact factor: 3.342

9.  Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta).

Authors:  Karyna Rosario; Anisha Dayaram; Milen Marinov; Jessica Ware; Simona Kraberger; Daisy Stainton; Mya Breitbart; Arvind Varsani
Journal:  J Gen Virol       Date:  2012-08-22       Impact factor: 3.891

10.  Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes.

Authors:  Terry Fei Fan Ng; Dana L Willner; Yan Wei Lim; Robert Schmieder; Betty Chau; Christina Nilsson; Simon Anthony; Yijun Ruan; Forest Rohwer; Mya Breitbart
Journal:  PLoS One       Date:  2011-06-06       Impact factor: 3.240

View more
  4 in total

1.  Detection and Molecular Characterization of Gemycircularvirus from Environmental Samples in Brazil.

Authors:  Matheus Ribeiro da Silva Assis; Carmen Baur Vieira; Julia Monassa Fioretti; Mônica Simões Rocha; Pedro Ivo Neves de Almeida; Marize Pereira Miagostovich; Tulio Machado Fumian
Journal:  Food Environ Virol       Date:  2016-07-08       Impact factor: 2.778

2.  Family Genomoviridae: 2021 taxonomy update.

Authors:  Arvind Varsani; Mart Krupovic
Journal:  Arch Virol       Date:  2021-07-31       Impact factor: 2.574

3.  Fungal DNA virus infects a mycophagous insect and utilizes it as a transmission vector.

Authors:  Si Liu; Jiatao Xie; Jiasen Cheng; Bo Li; Tao Chen; Yanping Fu; Guoqing Li; Manqun Wang; Huanan Jin; Hu Wan; Daohong Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

4.  Sequence-based taxonomic framework for the classification of uncultured single-stranded DNA viruses of the family Genomoviridae.

Authors:  Arvind Varsani; Mart Krupovic
Journal:  Virus Evol       Date:  2017-02-02
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.