Literature DB >> 25577985

Identification of diverse circular single-stranded DNA viruses in adult dragonflies and damselflies (Insecta: Odonata) of Arizona and Oklahoma, USA.

Anisha Dayaram1, Kristen A Potter2, Roberta Pailes3, Milen Marinov4, Dana D Rosenstein5, Arvind Varsani6.   

Abstract

Next generation sequencing and metagenomic approaches are commonly used for the identification of circular replication associated protein (Rep)-encoding single stranded (CRESS) DNA viruses circulating in various environments. These approaches have enabled the discovery of some CRESS DNA viruses associated with insects. In this study we identified and recovered 31 viral genomes which represent 24 distinct CRESS DNA viruses from seven dragonfly species (Rhionaeschna multicolor, Erythemis simplicicollis, Erythrodiplax fusca, Libellula quadrimaculata, Libellula saturata, Pachydiplax longipennis, and Pantala hymenaea) and two damselfly species (Ischnura posita, Ischnura ramburii) sampled in various locations in the states of Arizona and Oklahoma of the United States of America (USA). We also identified Sclerotinia sclerotiorum hypovirulence-associated DNA virus-1 (SsHADV-1) in P. hymenaea, E. simplicicollis and I. ramburii sampled in Oklahoma, which is the first report of SsHADV-1 in the New World. The genome architectures of the CRESS DNA viruses recovered vary, but they all have at least two major open reading frames (ORFs) that have either a bidirectional or unidirectional arrangement. Four of the viral genomes recovered, in addition to the three isolates of SsHADV-1, show similarities to viruses of the proposed gemycircularvirus group. Analysis of the Rep encoded by the remaining 24 viral genomes reveals that these are highly diverse and allude to the fact that they represent novel CRESS DNA viruses.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Odonata; Replication-associated protein; Sclerotinia sclerotiorum; SsHADV-1; ssDNA viruses

Mesh:

Substances:

Year:  2015        PMID: 25577985     DOI: 10.1016/j.meegid.2014.12.037

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  31 in total

1.  A novel gemycircularvirus from experimental rats.

Authors:  Wang Li; Yu Gu; Quan Shen; Shixing Yang; Xiaochun Wang; Yan Wan; Wen Zhang
Journal:  Virus Genes       Date:  2015-08-25       Impact factor: 2.332

2.  Detection and Molecular Characterization of Gemycircularvirus from Environmental Samples in Brazil.

Authors:  Matheus Ribeiro da Silva Assis; Carmen Baur Vieira; Julia Monassa Fioretti; Mônica Simões Rocha; Pedro Ivo Neves de Almeida; Marize Pereira Miagostovich; Tulio Machado Fumian
Journal:  Food Environ Virol       Date:  2016-07-08       Impact factor: 2.778

3.  Small circular single stranded DNA viral genomes in unexplained cases of human encephalitis, diarrhea, and in untreated sewage.

Authors:  Tung Gia Phan; Daisuke Mori; Xutao Deng; Shaman Rajindrajith; Udaya Ranawaka; Terry Fei Fan Ng; Filemon Bucardo-Rivera; Patricia Orlandi; Kamruddin Ahmed; Eric Delwart
Journal:  Virology       Date:  2015-04-01       Impact factor: 3.616

4.  Bugs full of viruses.

Authors:  Astrid Gall
Journal:  Nat Rev Microbiol       Date:  2015-04-13       Impact factor: 60.633

5.  Protocols for Investigating the Host-tissue Distribution, Transmission-mode, and Effect on the Host Fitness of a Densovirus in the Cotton Bollworm.

Authors:  Xianming Yang; Pengjun Xu; Robert I Graham; He Yuan; Kongming Wu
Journal:  J Vis Exp       Date:  2017-04-12       Impact factor: 1.355

6.  Identification of an anellovirus and genomoviruses in ixodid ticks.

Authors:  Kara Waits; Marten J Edwards; Ilaria N Cobb; Rafaela S Fontenele; Arvind Varsani
Journal:  Virus Genes       Date:  2017-11-15       Impact factor: 2.332

7.  Family Genomoviridae: 2021 taxonomy update.

Authors:  Arvind Varsani; Mart Krupovic
Journal:  Arch Virol       Date:  2021-07-31       Impact factor: 2.574

8.  Variation in virome diversity in wild populations of Penaeus monodon (Fabricius 1798) with emphasis on pathogenic viruses.

Authors:  Fredmoore L Orosco; Arturo O Lluisma
Journal:  Virusdisease       Date:  2017-07-01

9.  Fungal DNA virus infects a mycophagous insect and utilizes it as a transmission vector.

Authors:  Si Liu; Jiatao Xie; Jiasen Cheng; Bo Li; Tao Chen; Yanping Fu; Guoqing Li; Manqun Wang; Huanan Jin; Hu Wan; Daohong Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

10.  Identification of the Viral Determinant of Hypovirulence and Host Range in Sclerotiniaceae of a Genomovirus Reconstructed from the Plant Metagenome.

Authors:  Chenchen Feng; Jiuhuan Feng; Ziyi Wang; Connor Pedersen; Xiuqing Wang; Huma Saleem; Leslie Domier; Shin-Yi Lee Marzano
Journal:  J Virol       Date:  2021-08-10       Impact factor: 5.103

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