Literature DB >> 22171250

Metagenomic analysis of the viral flora of pine marten and European badger feces.

Judith M A van den Brand1, Marije van Leeuwen, Claudia M Schapendonk, James H Simon, Bart L Haagmans, Albert D M E Osterhaus, Saskia L Smits.   

Abstract

A thorough understanding of the diversity of viruses in wildlife provides epidemiological baseline information about potential pathogens. Metagenomic analysis of the enteric viral flora revealed a new anellovirus and bocavirus species in pine martens and a new circovirus-like virus and geminivirus-related DNA virus in European badgers. In addition, sequences with homology to viruses from the families Paramyxo- and Picornaviridae were detected.

Mesh：

Year:  2011        PMID： 22171250      PMCID： PMC3302375          DOI： 10.1128/JVI.06373-11

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  42 in total

1.  Human picobirnaviruses identified by molecular screening of diarrhea samples.

Authors:  Marije van Leeuwen; Marisol M W Williams; Penelope Koraka; James H Simon; Saskia L Smits; Albert D M E Osterhaus
Journal:  J Clin Microbiol       Date:  2010-03-24       Impact factor: 5.948

2.  Public health. Pathogen surveillance in animals.

Authors:  T Kuiken; F A Leighton; R A M Fouchier; J W LeDuc; J S M Peiris; A Schudel; K Stöhr; A D M E Osterhaus
Journal:  Science       Date:  2005-09-09       Impact factor: 47.728

3.  Phylogenetic analysis of Austrian canine distemper virus strains from clinical samples from dogs and wild carnivores.

Authors:  V Benetka; M Leschnik; N Affenzeller; K Möstl
Journal:  Vet Rec       Date:  2011-04-06       Impact factor: 2.695

4.  Integrative analysis of environmental sequences using MEGAN4.

Authors:  Daniel H Huson; Suparna Mitra; Hans-Joachim Ruscheweyh; Nico Weber; Stephan C Schuster
Journal:  Genome Res       Date:  2011-06-20       Impact factor: 9.043

5.  Species-specific TT viruses and cross-species infection in nonhuman primates.

Authors:  H Okamoto; M Fukuda; A Tawara; T Nishizawa; Y Itoh; I Hayasaka; F Tsuda; T Tanaka; Y Miyakawa; M Mayumi
Journal:  J Virol       Date:  2000-02       Impact factor: 5.103

6.  The fecal viral flora of California sea lions.

Authors:  Linlin Li; Tongling Shan; Chunlin Wang; Colette Côté; John Kolman; David Onions; Frances M D Gulland; Eric Delwart
Journal:  J Virol       Date:  2011-07-27       Impact factor: 5.103

7.  TT virus mRNAs detected in the bone marrow cells from an infected individual.

Authors:  H Okamoto; T Nishizawa; A Tawara; M Takahashi; J Kishimoto; T Sai; Y Sugai
Journal:  Biochem Biophys Res Commun       Date:  2000-12-20       Impact factor: 3.575

Review 8.  Classification of TTV and related viruses (anelloviruses).

Authors:  P Biagini
Journal:  Curr Top Microbiol Immunol       Date:  2009       Impact factor: 4.291

9.  The fecal viral flora of wild rodents.

Authors:  Tung G Phan; Beatrix Kapusinszky; Chunlin Wang; Robert K Rose; Howard L Lipton; Eric L Delwart
Journal:  PLoS Pathog       Date:  2011-09-01       Impact factor: 6.823

10.  Emerging pathogens: the epidemiology and evolution of species jumps.

Authors:  Mark E J Woolhouse; Daniel T Haydon; Rustom Antia
Journal:  Trends Ecol Evol       Date:  2005-05       Impact factor: 17.712
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  56 in total

1.  Complete genome sequence of the first canine circovirus.

Authors:  Amit Kapoor; Edward J Dubovi; Jose Angel Henriquez-Rivera; W Ian Lipkin
Journal:  J Virol       Date:  2012-06       Impact factor: 5.103

2.  A novel gemycircularvirus from experimental rats.

Authors:  Wang Li; Yu Gu; Quan Shen; Shixing Yang; Xiaochun Wang; Yan Wan; Wen Zhang
Journal:  Virus Genes       Date:  2015-08-25       Impact factor: 2.332

3.  Detection and Molecular Characterization of Gemycircularvirus from Environmental Samples in Brazil.

Authors:  Matheus Ribeiro da Silva Assis; Carmen Baur Vieira; Julia Monassa Fioretti; Mônica Simões Rocha; Pedro Ivo Neves de Almeida; Marize Pereira Miagostovich; Tulio Machado Fumian
Journal:  Food Environ Virol       Date:  2016-07-08       Impact factor: 2.778

4.  Small circular single stranded DNA viral genomes in unexplained cases of human encephalitis, diarrhea, and in untreated sewage.

Authors:  Tung Gia Phan; Daisuke Mori; Xutao Deng; Shaman Rajindrajith; Udaya Ranawaka; Terry Fei Fan Ng; Filemon Bucardo-Rivera; Patricia Orlandi; Kamruddin Ahmed; Eric Delwart
Journal:  Virology       Date:  2015-04-01       Impact factor: 3.616

5.  Identification of multiple novel viruses, including a parvovirus and a hepevirus, in feces of red foxes.

Authors:  Rogier Bodewes; Joke van der Giessen; Bart L Haagmans; Albert D M E Osterhaus; Saskia L Smits
Journal:  J Virol       Date:  2013-04-24       Impact factor: 5.103

6.  Faecal virome of cats in an animal shelter.

Authors:  Wen Zhang; Linlin Li; Xutao Deng; Beatrix Kapusinszky; Patricia A Pesavento; Eric Delwart
Journal:  J Gen Virol       Date:  2014-07-30       Impact factor: 3.891

7.  Family Genomoviridae: 2021 taxonomy update.

Authors:  Arvind Varsani; Mart Krupovic
Journal:  Arch Virol       Date:  2021-07-31       Impact factor: 2.574

8.  Extracellular transmission of a DNA mycovirus and its use as a natural fungicide.

Authors:  Xiao Yu; Bo Li; Yanping Fu; Jiatao Xie; Jiasen Cheng; Said A Ghabrial; Guoqing Li; Xianhong Yi; Daohong Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-07       Impact factor: 11.205

9.  Exploring the potential of next-generation sequencing in detection of respiratory viruses.

Authors:  Slinporn Prachayangprecha; Claudia M E Schapendonk; Marion P Koopmans; Albert D M E Osterhaus; Anita C Schürch; Suzan D Pas; Annemiek A van der Eijk; Yong Poovorawan; Bart L Haagmans; Saskia L Smits
Journal:  J Clin Microbiol       Date:  2014-08-06       Impact factor: 5.948

Review 10.  Going viral: next-generation sequencing applied to phage populations in the human gut.

Authors:  Alejandro Reyes; Nicholas P Semenkovich; Katrine Whiteson; Forest Rohwer; Jeffrey I Gordon
Journal:  Nat Rev Microbiol       Date:  2012-08-06       Impact factor: 60.633
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