Literature DB >> 26280985

Calculations of hyperfine coupling constant of copper(II) in aqueous environment. Finite temperature molecular dynamics and relativistic effects.

Michal Malček1, Lukáš Bučinský, Marián Valko, Stanislav Biskupič.   

Abstract

The presented paper is focused on the calculation of hyperfine coupling constants (HFCC) of Cu (2+) ion in water environment. To simulate the conditions of the electron paramagnetic resonance (EPR) experiment in aqueous phase, molecular dynamics using the density functional theory (DFT) was employed. In total three different functionals (BLYP, B3LYP, M06) were employed for studying their suitability in describing coordination of Cu (2+) by water molecules. The system of our interest was composed of one Cu (2+) cation surrounded by a selected number (between thirty and fifty) of water molecules. Besides the non-relativistic HFCCs (Fermi contact terms) of Cu (2+) also the four-component relativistic HFCC calculations are presented. The importance of the proper evaluation of HFCCs, the inclusion of spin-orbit term, for Cu (2+) containing systems (Neese, J. Chem. Phys. 118, 3939 2003; Almeida et al., Chem. Phys. 332, 176 2007) is confirmed at the relativistic four-component level of theory.

Entities:  

Year:  2015        PMID: 26280985     DOI: 10.1007/s00894-015-2752-8

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  19 in total

1.  First solvation shell of the Cu(II) aqua ion: evidence for fivefold coordination.

Authors:  A Pasquarello; I Petri; P S Salmon; O Parisel; R Car; E Toth; D H Powell; H E Fischer; L Helm; A Merbach
Journal:  Science       Date:  2001-02-02       Impact factor: 47.728

2.  Unified approach for molecular dynamics and density-functional theory.

Authors: 
Journal:  Phys Rev Lett       Date:  1985-11-25       Impact factor: 9.161

3.  Density functional theory for hyperfine coupling constants with the restricted-unrestricted approach.

Authors:  Zilvinas Rinkevicius; Lyudmyla Telyatnyk; Olav Vahtras; Hans Agren
Journal:  J Chem Phys       Date:  2004-10-22       Impact factor: 3.488

4.  A fully relativistic method for calculation of nuclear magnetic shielding tensors with a restricted magnetically balanced basis in the framework of the matrix Dirac-Kohn-Sham equation.

Authors:  Stanislav Komorovský; Michal Repiský; Olga L Malkina; Vladimir G Malkin; Irina Malkin Ondík; Martin Kaupp
Journal:  J Chem Phys       Date:  2008-03-14       Impact factor: 3.488

5.  Dynamics of ligand exchange mechanism at Cu(II) in water: an ab initio quantum mechanical charge field molecular dynamics study with extended quantum mechanical region.

Authors:  Syed Tarique Moin; Thomas S Hofer; Alexander K H Weiss; Bernd M Rode
Journal:  J Chem Phys       Date:  2013-07-07       Impact factor: 3.488

6.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

7.  Effects of finite size nuclei in relativistic four-component calculations of hyperfine structure.

Authors:  Elena Malkin; Michal Repiský; Stanislav Komorovský; Pavel Mach; Olga L Malkina; Vladimir G Malkin
Journal:  J Chem Phys       Date:  2011-01-28       Impact factor: 3.488

8.  The solution structure of [Cu(aq)]2+ and its implications for rack-induced bonding in blue copper protein active sites.

Authors:  Patrick Frank; Maurizio Benfatto; Robert K Szilagyi; Paola D'Angelo; Stefano Della Longa; Keith O Hodgson
Journal:  Inorg Chem       Date:  2005-03-21       Impact factor: 5.165

9.  Conformations, structural transitions and visible near-infrared absorption spectra of four-, five- and six-coordinated Cu(II) aqua complexes.

Authors:  Katia Júlia de Almeida; N Arul Murugan; Zilvinas Rinkevicius; Håkan Wilhelm Hugosson; Olav Vahtras; Hans Agren; Amary Cesar
Journal:  Phys Chem Chem Phys       Date:  2008-11-06       Impact factor: 3.676

10.  Electronic structure and solvation of copper and silver ions: a theoretical picture of a model aqueous redox reaction.

Authors:  Jochen Blumberger; Leonardo Bernasconi; Ivano Tavernelli; Rodolphe Vuilleumier; Michiel Sprik
Journal:  J Am Chem Soc       Date:  2004-03-31       Impact factor: 15.419

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