Literature DB >> 26279932

Crystal structure of (E)-5-di-ethyl-amino-2-({[4-(di-methyl-amino)-phen-yl]imino}-meth-yl)phenol.

C Vidya Rani1, G Chakkaravarthi2, G Rajagopal1.   

Abstract

The title Schiff base compound, C19H25N3O, is approximately planar, with a dihedral angle of 9.03 (13)° between the planes of the aromatic rings, and has an E conformation about the N=C bond. The mol-ecular structure is stabilized by an intra-molecular O-H⋯N hydrogen bond, with an S(6) ring motif. In the crystal, mol-ecules are linked by C-H⋯π inter-actions, forming sheets parallel to the bc plane.

Entities:  

Keywords:  C—H⋯π inter­actions; Schiff base; crystal structure; intra­molecular O—H⋯N hydrogen bond

Year:  2015        PMID: 26279932      PMCID: PMC4518928          DOI: 10.1107/S2056989015011779

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For biological activities of Schiff base derivatives, see: Savaliya et al. (2010 ▸); Xu et al. (2012 ▸). For the structures of similar compounds, see: Manvizhi et al. (2011 ▸); Thirugnanasundar et al. (2011 ▸).

Experimental

Crystal data

C19H25N3O M = 311.42 Monoclinic, a = 8.8201 (7) Å b = 7.8850 (7) Å c = 13.0639 (10) Å β = 108.407 (3)° V = 862.06 (12) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 295 K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.981, T max = 0.985 13009 measured reflections 3825 independent reflections 2438 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.159 S = 1.03 3825 reflections 214 parameters 6 restraints H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.16 e Å−3

Data collection: APEX2 (Bruker, 2004 ▸); cell refinement: SAINT (Bruker, 2004 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: PLATON (Spek, 2009 ▸) and Mercury (Macrae et al., 2008 ▸); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011779/su5157sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011779/su5157Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015011779/su5157Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015011779/su5157fig1.tif The mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. The intra­molecular O—H.·N hydrogen bonds is shown as a dashd lines (see Table 1 for details). Click here for additional data file. a . DOI: 10.1107/S2056989015011779/su5157fig2.tif A view along the a axis of the crystal apcking of the title compound. The O—H.·N and C-H⋯π inter­actions are illustrated by dashed lines (see Table 1 for details). CCDC reference: 1407678 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H25N3OF(000) = 336
Mr = 311.42Dx = 1.200 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 4428 reflections
a = 8.8201 (7) Åθ = 2.4–27.2°
b = 7.8850 (7) ŵ = 0.08 mm1
c = 13.0639 (10) ÅT = 295 K
β = 108.407 (3)°Block, colourless
V = 862.06 (12) Å30.26 × 0.22 × 0.20 mm
Z = 2
Bruker Kappa APEXII CCD diffractometer3825 independent reflections
Radiation source: fine-focus sealed tube2438 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
ω and φ scanθmax = 27.3°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→10
Tmin = 0.981, Tmax = 0.985k = −10→10
13009 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052H-atom parameters constrained
wR(F2) = 0.159w = 1/[σ2(Fo2) + (0.0751P)2 + 0.1538P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3825 reflectionsΔρmax = 0.29 e Å3
214 parametersΔρmin = −0.16 e Å3
6 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.014 (4)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4431 (4)0.6814 (5)0.2015 (2)0.0780 (10)
H1A0.34840.62530.15730.117*
H1B0.52130.68400.16440.117*
H1C0.41710.79530.21590.117*
C20.6641 (4)0.5264 (6)0.3287 (3)0.0902 (12)
H2A0.73160.58670.39010.135*
H2B0.70390.54050.26880.135*
H2C0.66350.40810.34590.135*
C30.4220 (3)0.5850 (3)0.3736 (2)0.0502 (6)
C40.2713 (3)0.6598 (4)0.3525 (2)0.0547 (7)
H40.22750.71800.28800.066*
C50.1861 (3)0.6502 (4)0.42371 (19)0.0512 (6)
H50.08600.70080.40670.061*
C60.2487 (3)0.5648 (3)0.52175 (18)0.0444 (6)
C70.3965 (3)0.4922 (3)0.5425 (2)0.0508 (6)
H70.44050.43520.60750.061*
C80.4820 (3)0.5003 (4)0.4715 (2)0.0537 (7)
H80.58160.44830.48890.064*
C90.0435 (3)0.6249 (4)0.59847 (19)0.0481 (6)
H9−0.00340.69750.54110.058*
C10−0.0294 (3)0.6066 (3)0.68154 (19)0.0462 (6)
C11−0.1669 (3)0.6947 (3)0.6784 (2)0.0537 (7)
H11−0.21500.76260.61880.064*
C12−0.2347 (3)0.6864 (4)0.7586 (2)0.0596 (8)
H12−0.32780.74670.75240.072*
C13−0.1648 (3)0.5871 (4)0.8507 (2)0.0528 (6)
C14−0.0279 (3)0.4940 (3)0.8547 (2)0.0523 (7)
H140.01980.42550.91410.063*
C150.0370 (3)0.5025 (3)0.7722 (2)0.0472 (6)
C16−0.1784 (4)0.4511 (5)1.0194 (3)0.0834 (10)
H16A−0.27020.41761.04030.100*
H16B−0.13930.35200.99150.100*
C17−0.0541 (5)0.5166 (6)1.1125 (3)0.1089 (14)
H17A0.03890.54321.09250.163*
H17B−0.02740.43271.16860.163*
H17C−0.09170.61731.13800.163*
C18−0.3507 (4)0.7080 (5)0.9409 (3)0.0835 (10)
H18A−0.33750.73261.01600.100*
H18B−0.33720.81310.90620.100*
C19−0.5106 (4)0.6420 (8)0.8890 (4)0.1178 (15)
H19A−0.52230.61290.81560.177*
H19B−0.58810.72670.89050.177*
H19C−0.52700.54280.92680.177*
N10.5063 (3)0.5915 (4)0.30117 (18)0.0693 (7)
N20.1707 (2)0.5451 (3)0.60028 (16)0.0495 (5)
N3−0.2261 (3)0.5836 (4)0.9344 (2)0.0826 (9)
O10.1678 (2)0.4075 (3)0.77919 (17)0.0695 (6)
H10.20100.43080.72890.104*
U11U22U33U12U13U23
C10.097 (2)0.090 (3)0.0568 (17)−0.0042 (19)0.0384 (16)0.0063 (17)
C20.0743 (17)0.127 (3)0.082 (2)0.0100 (19)0.0428 (18)0.012 (2)
C30.0561 (14)0.0511 (15)0.0454 (13)−0.0092 (13)0.0189 (11)0.0004 (12)
C40.0608 (16)0.0587 (17)0.0431 (13)0.0034 (14)0.0143 (12)0.0113 (13)
C50.0487 (13)0.0557 (16)0.0487 (14)0.0064 (12)0.0148 (11)0.0060 (13)
C60.0510 (14)0.0410 (14)0.0418 (13)−0.0028 (12)0.0154 (11)0.0013 (11)
C70.0506 (14)0.0535 (16)0.0453 (14)0.0033 (13)0.0110 (11)0.0073 (12)
C80.0494 (14)0.0554 (16)0.0544 (16)0.0018 (12)0.0137 (12)0.0038 (13)
C90.0505 (14)0.0473 (15)0.0436 (13)−0.0018 (13)0.0107 (11)0.0001 (11)
C100.0455 (13)0.0444 (14)0.0467 (13)−0.0009 (11)0.0116 (10)−0.0012 (11)
C110.0547 (14)0.0533 (16)0.0496 (14)0.0138 (12)0.0113 (12)0.0110 (12)
C120.0529 (14)0.066 (2)0.0604 (16)0.0188 (13)0.0188 (13)0.0095 (14)
C130.0533 (14)0.0548 (16)0.0530 (14)0.0039 (13)0.0207 (11)0.0075 (13)
C140.0543 (15)0.0523 (16)0.0506 (15)0.0101 (13)0.0167 (12)0.0147 (13)
C150.0403 (12)0.0443 (14)0.0554 (15)0.0053 (11)0.0129 (11)0.0050 (12)
C160.086 (2)0.093 (3)0.081 (2)0.0042 (18)0.0414 (19)0.0168 (16)
C170.126 (3)0.098 (3)0.097 (3)0.010 (3)0.028 (3)−0.008 (3)
C180.080 (2)0.107 (3)0.075 (2)0.0190 (17)0.0400 (18)0.0039 (19)
C190.094 (3)0.134 (4)0.131 (4)0.014 (3)0.043 (3)−0.015 (3)
N10.0737 (14)0.083 (2)0.0611 (15)0.0044 (13)0.0357 (13)0.0146 (14)
N20.0530 (12)0.0515 (14)0.0459 (11)0.0007 (10)0.0184 (9)0.0030 (10)
N30.0769 (16)0.112 (2)0.0696 (16)0.0288 (15)0.0381 (13)0.0210 (15)
O10.0666 (12)0.0777 (14)0.0737 (14)0.0302 (11)0.0356 (10)0.0283 (11)
C1—N11.432 (4)C11—C121.363 (4)
C1—H1A0.9600C11—H110.9300
C1—H1B0.9600C12—C131.404 (4)
C1—H1C0.9600C12—H120.9300
C2—N11.419 (4)C13—N31.364 (3)
C2—H2A0.9600C13—C141.400 (3)
C2—H2B0.9600C14—C151.373 (4)
C2—H2C0.9600C14—H140.9300
C3—N11.377 (3)C15—O11.354 (3)
C3—C81.390 (4)C16—C171.451 (5)
C3—C41.400 (4)C16—N31.485 (4)
C4—C51.370 (4)C16—H16A0.9700
C4—H40.9300C16—H16B0.9700
C5—C61.397 (3)C17—H17A0.9600
C5—H50.9300C17—H17B0.9600
C6—C71.370 (3)C17—H17C0.9600
C6—N21.413 (3)C18—C191.454 (5)
C7—C81.370 (4)C18—N31.495 (4)
C7—H70.9300C18—H18A0.9700
C8—H80.9300C18—H18B0.9700
C9—N21.280 (3)C19—H19A0.9600
C9—C101.433 (3)C19—H19B0.9600
C9—H90.9300C19—H19C0.9600
C10—C111.386 (3)O1—H10.8200
C10—C151.407 (3)
N1—C1—H1A109.5N3—C13—C14121.0 (2)
N1—C1—H1B109.5N3—C13—C12121.3 (2)
H1A—C1—H1B109.5C14—C13—C12117.7 (2)
N1—C1—H1C109.5C15—C14—C13120.9 (2)
H1A—C1—H1C109.5C15—C14—H14119.5
H1B—C1—H1C109.5C13—C14—H14119.5
N1—C2—H2A109.5O1—C15—C14118.5 (2)
N1—C2—H2B109.5O1—C15—C10119.9 (2)
H2A—C2—H2B109.5C14—C15—C10121.6 (2)
N1—C2—H2C109.5C17—C16—N3109.7 (3)
H2A—C2—H2C109.5C17—C16—H16A109.7
H2B—C2—H2C109.5N3—C16—H16A109.7
N1—C3—C8121.2 (2)C17—C16—H16B109.7
N1—C3—C4122.3 (2)N3—C16—H16B109.7
C8—C3—C4116.4 (2)H16A—C16—H16B108.2
C5—C4—C3122.2 (2)C16—C17—H17A109.5
C5—C4—H4118.9C16—C17—H17B109.5
C3—C4—H4118.9H17A—C17—H17B109.5
C4—C5—C6120.4 (2)C16—C17—H17C109.5
C4—C5—H5119.8H17A—C17—H17C109.5
C6—C5—H5119.8H17B—C17—H17C109.5
C7—C6—C5117.3 (2)C19—C18—N3111.1 (3)
C7—C6—N2117.5 (2)C19—C18—H18A109.4
C5—C6—N2125.2 (2)N3—C18—H18A109.4
C8—C7—C6122.6 (2)C19—C18—H18B109.4
C8—C7—H7118.7N3—C18—H18B109.4
C6—C7—H7118.7H18A—C18—H18B108.0
C7—C8—C3121.0 (2)C18—C19—H19A109.5
C7—C8—H8119.5C18—C19—H19B109.5
C3—C8—H8119.5H19A—C19—H19B109.5
N2—C9—C10122.5 (2)C18—C19—H19C109.5
N2—C9—H9118.8H19A—C19—H19C109.5
C10—C9—H9118.8H19B—C19—H19C109.5
C11—C10—C15116.4 (2)C3—N1—C2120.8 (2)
C11—C10—C9121.6 (2)C3—N1—C1120.2 (2)
C15—C10—C9121.9 (2)C2—N1—C1118.6 (2)
C12—C11—C10123.1 (2)C9—N2—C6123.9 (2)
C12—C11—H11118.5C13—N3—C16121.5 (3)
C10—C11—H11118.5C13—N3—C18121.1 (3)
C11—C12—C13120.3 (2)C16—N3—C18117.4 (2)
C11—C12—H12119.8C15—O1—H1109.5
C13—C12—H12119.8
N1—C3—C4—C5178.6 (3)C13—C14—C15—C101.1 (4)
C8—C3—C4—C5−0.3 (4)C11—C10—C15—O1177.5 (3)
C3—C4—C5—C60.5 (4)C9—C10—C15—O1−4.4 (4)
C4—C5—C6—C7−0.2 (4)C11—C10—C15—C14−2.3 (4)
C4—C5—C6—N2−179.1 (3)C9—C10—C15—C14175.8 (3)
C5—C6—C7—C8−0.3 (4)C8—C3—N1—C2−6.4 (5)
N2—C6—C7—C8178.7 (2)C4—C3—N1—C2174.8 (3)
C6—C7—C8—C30.5 (4)C8—C3—N1—C1−179.2 (3)
N1—C3—C8—C7−179.0 (3)C4—C3—N1—C12.1 (4)
C4—C3—C8—C7−0.2 (4)C10—C9—N2—C6−177.7 (2)
N2—C9—C10—C11179.7 (2)C7—C6—N2—C9170.0 (2)
N2—C9—C10—C151.7 (4)C5—C6—N2—C9−11.0 (4)
C15—C10—C11—C121.4 (4)C14—C13—N3—C16−15.8 (5)
C9—C10—C11—C12−176.7 (3)C12—C13—N3—C16165.5 (3)
C10—C11—C12—C130.8 (4)C14—C13—N3—C18167.5 (3)
C11—C12—C13—N3176.7 (3)C12—C13—N3—C18−11.3 (5)
C11—C12—C13—C14−2.1 (4)C17—C16—N3—C1397.4 (4)
N3—C13—C14—C15−177.6 (3)C17—C16—N3—C18−85.7 (4)
C12—C13—C14—C151.2 (4)C19—C18—N3—C1391.4 (4)
C13—C14—C15—O1−178.8 (3)C19—C18—N3—C16−85.5 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N20.821.852.585 (3)148
C11—H11···Cg1i0.932.713.517 (3)145
C17—H17B···Cg2ii0.962.903.743 (5)147
Table 1

Hydrogen-bond geometry (, )

Cg1 and Cg2 are the centroids of rings C3C8 and C10C15, respectively.

DHA DHHA D A DHA
O1H1N20.821.852.585(3)148
C11H11Cg1i 0.932.713.517(3)145
C17H17B Cg2ii 0.962.903.743(5)147

Symmetry codes: (i) ; (ii) .

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