| Literature DB >> 26279932 |
C Vidya Rani1, G Chakkaravarthi2, G Rajagopal1.
Abstract
The title Schiff base compound, C19H25N3O, is approximately planar, with a dihedral angle of 9.03 (13)° between the planes of the aromatic rings, and has an E conformation about the N=C bond. The mol-ecular structure is stabilized by an intra-molecular O-H⋯N hydrogen bond, with an S(6) ring motif. In the crystal, mol-ecules are linked by C-H⋯π inter-actions, forming sheets parallel to the bc plane.Entities:
Keywords: C—H⋯π interactions; Schiff base; crystal structure; intramolecular O—H⋯N hydrogen bond
Year: 2015 PMID: 26279932 PMCID: PMC4518928 DOI: 10.1107/S2056989015011779
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C19H25N3O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 4428 reflections |
| θ = 2.4–27.2° | |
| µ = 0.08 mm−1 | |
| β = 108.407 (3)° | Block, colourless |
| 0.26 × 0.22 × 0.20 mm | |
| Bruker Kappa APEXII CCD diffractometer | 3825 independent reflections |
| Radiation source: fine-focus sealed tube | 2438 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 27.3°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 13009 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3825 reflections | Δρmax = 0.29 e Å−3 |
| 214 parameters | Δρmin = −0.16 e Å−3 |
| 6 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (4) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.4431 (4) | 0.6814 (5) | 0.2015 (2) | 0.0780 (10) | |
| H1A | 0.3484 | 0.6253 | 0.1573 | 0.117* | |
| H1B | 0.5213 | 0.6840 | 0.1644 | 0.117* | |
| H1C | 0.4171 | 0.7953 | 0.2159 | 0.117* | |
| C2 | 0.6641 (4) | 0.5264 (6) | 0.3287 (3) | 0.0902 (12) | |
| H2A | 0.7316 | 0.5867 | 0.3901 | 0.135* | |
| H2B | 0.7039 | 0.5405 | 0.2688 | 0.135* | |
| H2C | 0.6635 | 0.4081 | 0.3459 | 0.135* | |
| C3 | 0.4220 (3) | 0.5850 (3) | 0.3736 (2) | 0.0502 (6) | |
| C4 | 0.2713 (3) | 0.6598 (4) | 0.3525 (2) | 0.0547 (7) | |
| H4 | 0.2275 | 0.7180 | 0.2880 | 0.066* | |
| C5 | 0.1861 (3) | 0.6502 (4) | 0.42371 (19) | 0.0512 (6) | |
| H5 | 0.0860 | 0.7008 | 0.4067 | 0.061* | |
| C6 | 0.2487 (3) | 0.5648 (3) | 0.52175 (18) | 0.0444 (6) | |
| C7 | 0.3965 (3) | 0.4922 (3) | 0.5425 (2) | 0.0508 (6) | |
| H7 | 0.4405 | 0.4352 | 0.6075 | 0.061* | |
| C8 | 0.4820 (3) | 0.5003 (4) | 0.4715 (2) | 0.0537 (7) | |
| H8 | 0.5816 | 0.4483 | 0.4889 | 0.064* | |
| C9 | 0.0435 (3) | 0.6249 (4) | 0.59847 (19) | 0.0481 (6) | |
| H9 | −0.0034 | 0.6975 | 0.5411 | 0.058* | |
| C10 | −0.0294 (3) | 0.6066 (3) | 0.68154 (19) | 0.0462 (6) | |
| C11 | −0.1669 (3) | 0.6947 (3) | 0.6784 (2) | 0.0537 (7) | |
| H11 | −0.2150 | 0.7626 | 0.6188 | 0.064* | |
| C12 | −0.2347 (3) | 0.6864 (4) | 0.7586 (2) | 0.0596 (8) | |
| H12 | −0.3278 | 0.7467 | 0.7524 | 0.072* | |
| C13 | −0.1648 (3) | 0.5871 (4) | 0.8507 (2) | 0.0528 (6) | |
| C14 | −0.0279 (3) | 0.4940 (3) | 0.8547 (2) | 0.0523 (7) | |
| H14 | 0.0198 | 0.4255 | 0.9141 | 0.063* | |
| C15 | 0.0370 (3) | 0.5025 (3) | 0.7722 (2) | 0.0472 (6) | |
| C16 | −0.1784 (4) | 0.4511 (5) | 1.0194 (3) | 0.0834 (10) | |
| H16A | −0.2702 | 0.4176 | 1.0403 | 0.100* | |
| H16B | −0.1393 | 0.3520 | 0.9915 | 0.100* | |
| C17 | −0.0541 (5) | 0.5166 (6) | 1.1125 (3) | 0.1089 (14) | |
| H17A | 0.0389 | 0.5432 | 1.0925 | 0.163* | |
| H17B | −0.0274 | 0.4327 | 1.1686 | 0.163* | |
| H17C | −0.0917 | 0.6173 | 1.1380 | 0.163* | |
| C18 | −0.3507 (4) | 0.7080 (5) | 0.9409 (3) | 0.0835 (10) | |
| H18A | −0.3375 | 0.7326 | 1.0160 | 0.100* | |
| H18B | −0.3372 | 0.8131 | 0.9062 | 0.100* | |
| C19 | −0.5106 (4) | 0.6420 (8) | 0.8890 (4) | 0.1178 (15) | |
| H19A | −0.5223 | 0.6129 | 0.8156 | 0.177* | |
| H19B | −0.5881 | 0.7267 | 0.8905 | 0.177* | |
| H19C | −0.5270 | 0.5428 | 0.9268 | 0.177* | |
| N1 | 0.5063 (3) | 0.5915 (4) | 0.30117 (18) | 0.0693 (7) | |
| N2 | 0.1707 (2) | 0.5451 (3) | 0.60028 (16) | 0.0495 (5) | |
| N3 | −0.2261 (3) | 0.5836 (4) | 0.9344 (2) | 0.0826 (9) | |
| O1 | 0.1678 (2) | 0.4075 (3) | 0.77919 (17) | 0.0695 (6) | |
| H1 | 0.2010 | 0.4308 | 0.7289 | 0.104* |
| C1 | 0.097 (2) | 0.090 (3) | 0.0568 (17) | −0.0042 (19) | 0.0384 (16) | 0.0063 (17) |
| C2 | 0.0743 (17) | 0.127 (3) | 0.082 (2) | 0.0100 (19) | 0.0428 (18) | 0.012 (2) |
| C3 | 0.0561 (14) | 0.0511 (15) | 0.0454 (13) | −0.0092 (13) | 0.0189 (11) | 0.0004 (12) |
| C4 | 0.0608 (16) | 0.0587 (17) | 0.0431 (13) | 0.0034 (14) | 0.0143 (12) | 0.0113 (13) |
| C5 | 0.0487 (13) | 0.0557 (16) | 0.0487 (14) | 0.0064 (12) | 0.0148 (11) | 0.0060 (13) |
| C6 | 0.0510 (14) | 0.0410 (14) | 0.0418 (13) | −0.0028 (12) | 0.0154 (11) | 0.0013 (11) |
| C7 | 0.0506 (14) | 0.0535 (16) | 0.0453 (14) | 0.0033 (13) | 0.0110 (11) | 0.0073 (12) |
| C8 | 0.0494 (14) | 0.0554 (16) | 0.0544 (16) | 0.0018 (12) | 0.0137 (12) | 0.0038 (13) |
| C9 | 0.0505 (14) | 0.0473 (15) | 0.0436 (13) | −0.0018 (13) | 0.0107 (11) | 0.0001 (11) |
| C10 | 0.0455 (13) | 0.0444 (14) | 0.0467 (13) | −0.0009 (11) | 0.0116 (10) | −0.0012 (11) |
| C11 | 0.0547 (14) | 0.0533 (16) | 0.0496 (14) | 0.0138 (12) | 0.0113 (12) | 0.0110 (12) |
| C12 | 0.0529 (14) | 0.066 (2) | 0.0604 (16) | 0.0188 (13) | 0.0188 (13) | 0.0095 (14) |
| C13 | 0.0533 (14) | 0.0548 (16) | 0.0530 (14) | 0.0039 (13) | 0.0207 (11) | 0.0075 (13) |
| C14 | 0.0543 (15) | 0.0523 (16) | 0.0506 (15) | 0.0101 (13) | 0.0167 (12) | 0.0147 (13) |
| C15 | 0.0403 (12) | 0.0443 (14) | 0.0554 (15) | 0.0053 (11) | 0.0129 (11) | 0.0050 (12) |
| C16 | 0.086 (2) | 0.093 (3) | 0.081 (2) | 0.0042 (18) | 0.0414 (19) | 0.0168 (16) |
| C17 | 0.126 (3) | 0.098 (3) | 0.097 (3) | 0.010 (3) | 0.028 (3) | −0.008 (3) |
| C18 | 0.080 (2) | 0.107 (3) | 0.075 (2) | 0.0190 (17) | 0.0400 (18) | 0.0039 (19) |
| C19 | 0.094 (3) | 0.134 (4) | 0.131 (4) | 0.014 (3) | 0.043 (3) | −0.015 (3) |
| N1 | 0.0737 (14) | 0.083 (2) | 0.0611 (15) | 0.0044 (13) | 0.0357 (13) | 0.0146 (14) |
| N2 | 0.0530 (12) | 0.0515 (14) | 0.0459 (11) | 0.0007 (10) | 0.0184 (9) | 0.0030 (10) |
| N3 | 0.0769 (16) | 0.112 (2) | 0.0696 (16) | 0.0288 (15) | 0.0381 (13) | 0.0210 (15) |
| O1 | 0.0666 (12) | 0.0777 (14) | 0.0737 (14) | 0.0302 (11) | 0.0356 (10) | 0.0283 (11) |
| C1—N1 | 1.432 (4) | C11—C12 | 1.363 (4) |
| C1—H1A | 0.9600 | C11—H11 | 0.9300 |
| C1—H1B | 0.9600 | C12—C13 | 1.404 (4) |
| C1—H1C | 0.9600 | C12—H12 | 0.9300 |
| C2—N1 | 1.419 (4) | C13—N3 | 1.364 (3) |
| C2—H2A | 0.9600 | C13—C14 | 1.400 (3) |
| C2—H2B | 0.9600 | C14—C15 | 1.373 (4) |
| C2—H2C | 0.9600 | C14—H14 | 0.9300 |
| C3—N1 | 1.377 (3) | C15—O1 | 1.354 (3) |
| C3—C8 | 1.390 (4) | C16—C17 | 1.451 (5) |
| C3—C4 | 1.400 (4) | C16—N3 | 1.485 (4) |
| C4—C5 | 1.370 (4) | C16—H16A | 0.9700 |
| C4—H4 | 0.9300 | C16—H16B | 0.9700 |
| C5—C6 | 1.397 (3) | C17—H17A | 0.9600 |
| C5—H5 | 0.9300 | C17—H17B | 0.9600 |
| C6—C7 | 1.370 (3) | C17—H17C | 0.9600 |
| C6—N2 | 1.413 (3) | C18—C19 | 1.454 (5) |
| C7—C8 | 1.370 (4) | C18—N3 | 1.495 (4) |
| C7—H7 | 0.9300 | C18—H18A | 0.9700 |
| C8—H8 | 0.9300 | C18—H18B | 0.9700 |
| C9—N2 | 1.280 (3) | C19—H19A | 0.9600 |
| C9—C10 | 1.433 (3) | C19—H19B | 0.9600 |
| C9—H9 | 0.9300 | C19—H19C | 0.9600 |
| C10—C11 | 1.386 (3) | O1—H1 | 0.8200 |
| C10—C15 | 1.407 (3) | ||
| N1—C1—H1A | 109.5 | N3—C13—C14 | 121.0 (2) |
| N1—C1—H1B | 109.5 | N3—C13—C12 | 121.3 (2) |
| H1A—C1—H1B | 109.5 | C14—C13—C12 | 117.7 (2) |
| N1—C1—H1C | 109.5 | C15—C14—C13 | 120.9 (2) |
| H1A—C1—H1C | 109.5 | C15—C14—H14 | 119.5 |
| H1B—C1—H1C | 109.5 | C13—C14—H14 | 119.5 |
| N1—C2—H2A | 109.5 | O1—C15—C14 | 118.5 (2) |
| N1—C2—H2B | 109.5 | O1—C15—C10 | 119.9 (2) |
| H2A—C2—H2B | 109.5 | C14—C15—C10 | 121.6 (2) |
| N1—C2—H2C | 109.5 | C17—C16—N3 | 109.7 (3) |
| H2A—C2—H2C | 109.5 | C17—C16—H16A | 109.7 |
| H2B—C2—H2C | 109.5 | N3—C16—H16A | 109.7 |
| N1—C3—C8 | 121.2 (2) | C17—C16—H16B | 109.7 |
| N1—C3—C4 | 122.3 (2) | N3—C16—H16B | 109.7 |
| C8—C3—C4 | 116.4 (2) | H16A—C16—H16B | 108.2 |
| C5—C4—C3 | 122.2 (2) | C16—C17—H17A | 109.5 |
| C5—C4—H4 | 118.9 | C16—C17—H17B | 109.5 |
| C3—C4—H4 | 118.9 | H17A—C17—H17B | 109.5 |
| C4—C5—C6 | 120.4 (2) | C16—C17—H17C | 109.5 |
| C4—C5—H5 | 119.8 | H17A—C17—H17C | 109.5 |
| C6—C5—H5 | 119.8 | H17B—C17—H17C | 109.5 |
| C7—C6—C5 | 117.3 (2) | C19—C18—N3 | 111.1 (3) |
| C7—C6—N2 | 117.5 (2) | C19—C18—H18A | 109.4 |
| C5—C6—N2 | 125.2 (2) | N3—C18—H18A | 109.4 |
| C8—C7—C6 | 122.6 (2) | C19—C18—H18B | 109.4 |
| C8—C7—H7 | 118.7 | N3—C18—H18B | 109.4 |
| C6—C7—H7 | 118.7 | H18A—C18—H18B | 108.0 |
| C7—C8—C3 | 121.0 (2) | C18—C19—H19A | 109.5 |
| C7—C8—H8 | 119.5 | C18—C19—H19B | 109.5 |
| C3—C8—H8 | 119.5 | H19A—C19—H19B | 109.5 |
| N2—C9—C10 | 122.5 (2) | C18—C19—H19C | 109.5 |
| N2—C9—H9 | 118.8 | H19A—C19—H19C | 109.5 |
| C10—C9—H9 | 118.8 | H19B—C19—H19C | 109.5 |
| C11—C10—C15 | 116.4 (2) | C3—N1—C2 | 120.8 (2) |
| C11—C10—C9 | 121.6 (2) | C3—N1—C1 | 120.2 (2) |
| C15—C10—C9 | 121.9 (2) | C2—N1—C1 | 118.6 (2) |
| C12—C11—C10 | 123.1 (2) | C9—N2—C6 | 123.9 (2) |
| C12—C11—H11 | 118.5 | C13—N3—C16 | 121.5 (3) |
| C10—C11—H11 | 118.5 | C13—N3—C18 | 121.1 (3) |
| C11—C12—C13 | 120.3 (2) | C16—N3—C18 | 117.4 (2) |
| C11—C12—H12 | 119.8 | C15—O1—H1 | 109.5 |
| C13—C12—H12 | 119.8 | ||
| N1—C3—C4—C5 | 178.6 (3) | C13—C14—C15—C10 | 1.1 (4) |
| C8—C3—C4—C5 | −0.3 (4) | C11—C10—C15—O1 | 177.5 (3) |
| C3—C4—C5—C6 | 0.5 (4) | C9—C10—C15—O1 | −4.4 (4) |
| C4—C5—C6—C7 | −0.2 (4) | C11—C10—C15—C14 | −2.3 (4) |
| C4—C5—C6—N2 | −179.1 (3) | C9—C10—C15—C14 | 175.8 (3) |
| C5—C6—C7—C8 | −0.3 (4) | C8—C3—N1—C2 | −6.4 (5) |
| N2—C6—C7—C8 | 178.7 (2) | C4—C3—N1—C2 | 174.8 (3) |
| C6—C7—C8—C3 | 0.5 (4) | C8—C3—N1—C1 | −179.2 (3) |
| N1—C3—C8—C7 | −179.0 (3) | C4—C3—N1—C1 | 2.1 (4) |
| C4—C3—C8—C7 | −0.2 (4) | C10—C9—N2—C6 | −177.7 (2) |
| N2—C9—C10—C11 | 179.7 (2) | C7—C6—N2—C9 | 170.0 (2) |
| N2—C9—C10—C15 | 1.7 (4) | C5—C6—N2—C9 | −11.0 (4) |
| C15—C10—C11—C12 | 1.4 (4) | C14—C13—N3—C16 | −15.8 (5) |
| C9—C10—C11—C12 | −176.7 (3) | C12—C13—N3—C16 | 165.5 (3) |
| C10—C11—C12—C13 | 0.8 (4) | C14—C13—N3—C18 | 167.5 (3) |
| C11—C12—C13—N3 | 176.7 (3) | C12—C13—N3—C18 | −11.3 (5) |
| C11—C12—C13—C14 | −2.1 (4) | C17—C16—N3—C13 | 97.4 (4) |
| N3—C13—C14—C15 | −177.6 (3) | C17—C16—N3—C18 | −85.7 (4) |
| C12—C13—C14—C15 | 1.2 (4) | C19—C18—N3—C13 | 91.4 (4) |
| C13—C14—C15—O1 | −178.8 (3) | C19—C18—N3—C16 | −85.5 (4) |
| H··· | ||||
| O1—H1···N2 | 0.82 | 1.85 | 2.585 (3) | 148 |
| C11—H11··· | 0.93 | 2.71 | 3.517 (3) | 145 |
| C17—H17 | 0.96 | 2.90 | 3.743 (5) | 147 |
Hydrogen-bond geometry (, )
Cg1 and Cg2 are the centroids of rings C3C8 and C10C15, respectively.
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1N2 | 0.82 | 1.85 | 2.585(3) | 148 |
| C11H11 | 0.93 | 2.71 | 3.517(3) | 145 |
| C17H17 | 0.96 | 2.90 | 3.743(5) | 147 |
Symmetry codes: (i) ; (ii) .