Literature DB >> 22064908

2,4-Diiodo-6-{[4-(morpholin-4-yl)phenyl]iminomethyl}phenol.

K Manvizhi, G Chakkaravarthi, G Anbalagan, G Rajagopal.   

Abstract

In the title compound, C(17)H(16)I(2)N(2)O(2), the two aromatic rings are almost coplanar [dihedral angle 2.57 (15)°]. The morpholine ring adopts a chair conformation. The mol-ecular structure is stabilized by an O-H⋯N hydrogen bond and the crystal packing exhibits weak inter-molecular C-H⋯O and π-π [centroid-to-centroid distances 3.663 (3)-4.073 (3) Å] inter-actions.

Entities:  

Year:  2011        PMID: 22064908      PMCID: PMC3200745          DOI: 10.1107/S1600536811034519

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of morpholine derivatives, see: Lan et al. (2010 ▶); Raparti et al.(2009 ▶). For a related structure, see: Yang et al. (2011 ▶). For the definition of puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C17H16I2N2O2 M = 534.12 Monoclinic, a = 26.4133 (16) Å b = 7.6598 (4) Å c = 18.0332 (11) Å β = 91.417 (2)° V = 3647.4 (4) Å3 Z = 8 Mo Kα radiation μ = 3.46 mm−1 T = 295 K 0.26 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.467, T max = 0.545 17839 measured reflections 7647 independent reflections 4855 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.113 S = 1.16 7647 reflections 208 parameters H-atom parameters constrained Δρmax = 1.22 e Å−3 Δρmin = −1.72 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034519/bt5621sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034519/bt5621Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034519/bt5621Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H16I2N2O2F(000) = 2032
Mr = 534.12Dx = 1.945 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 6743 reflections
a = 26.4133 (16) Åθ = 2.7–35.4°
b = 7.6598 (4) ŵ = 3.46 mm1
c = 18.0332 (11) ÅT = 295 K
β = 91.417 (2)°Block, colourless
V = 3647.4 (4) Å30.26 × 0.20 × 0.20 mm
Z = 8
Bruker Kappa APEXII diffractometer7647 independent reflections
Radiation source: fine-focus sealed tube4855 reflections with I > 2σ(I)
graphiteRint = 0.023
ω and φ scansθmax = 35.9°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −42→42
Tmin = 0.467, Tmax = 0.545k = −5→12
17839 measured reflectionsl = −29→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.16w = 1/[σ2(Fo2) + (0.0134P)2 + 27.6528P] where P = (Fo2 + 2Fc2)/3
7647 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 1.22 e Å3
0 restraintsΔρmin = −1.72 e Å3
xyzUiso*/Ueq
I10.198728 (14)−0.04313 (7)0.01153 (2)0.06368 (14)
I20.097444 (12)−0.01689 (5)0.305807 (16)0.04538 (10)
O1−0.25208 (14)0.6183 (6)−0.2595 (3)0.0645 (11)
O20.09297 (14)0.1239 (6)−0.03377 (17)0.0567 (10)
H20.06830.1836−0.04530.085*
N10.00453 (14)0.2516 (5)−0.0214 (2)0.0399 (9)
N2−0.16015 (14)0.5632 (5)−0.1763 (2)0.0425 (9)
C10.13595 (16)0.0208 (6)0.0746 (2)0.0369 (9)
C20.09350 (17)0.0948 (6)0.0387 (2)0.0373 (9)
C30.05152 (15)0.1370 (6)0.0821 (2)0.0335 (9)
C40.05340 (16)0.1049 (6)0.1581 (2)0.0361 (9)
H40.02570.13320.18670.043*
C50.09549 (15)0.0320 (6)0.1913 (2)0.0329 (9)
C60.13743 (15)−0.0108 (6)0.1495 (2)0.0337 (9)
H60.1660−0.06010.17210.040*
C70.00713 (17)0.2167 (6)0.0481 (3)0.0395 (10)
H7−0.02030.24340.07750.047*
C8−0.03754 (17)0.3331 (6)−0.0573 (3)0.0396 (10)
C9−0.03566 (18)0.3557 (7)−0.1329 (3)0.0450 (11)
H9−0.00700.3202−0.15770.054*
C10−0.07575 (19)0.4305 (7)−0.1727 (3)0.0462 (11)
H10−0.07350.4440−0.22380.055*
C11−0.11929 (17)0.4858 (6)−0.1375 (3)0.0402 (10)
C12−0.12009 (19)0.4645 (8)−0.0609 (3)0.0505 (13)
H12−0.14830.5023−0.03550.061*
C13−0.0805 (2)0.3894 (8)−0.0215 (3)0.0520 (13)
H13−0.08250.37620.02960.062*
C14−0.1627 (2)0.5380 (8)−0.2559 (3)0.0591 (15)
H14A−0.16920.4159−0.26680.071*
H14B−0.13050.5691−0.27680.071*
C15−0.2046 (2)0.6497 (9)−0.2912 (4)0.0682 (18)
H15A−0.19590.7720−0.28520.082*
H15B−0.20690.6250−0.34400.082*
C16−0.2480 (2)0.6635 (9)−0.1835 (4)0.0655 (17)
H16A−0.28070.6489−0.16110.079*
H16B−0.23850.7855−0.17910.079*
C17−0.20944 (19)0.5535 (8)−0.1423 (3)0.0573 (15)
H17A−0.20640.5932−0.09130.069*
H17B−0.22080.4331−0.14190.069*
U11U22U33U12U13U23
I10.04506 (19)0.1026 (4)0.04403 (18)0.0186 (2)0.01452 (14)−0.0004 (2)
I20.04006 (15)0.0669 (2)0.02930 (13)0.00174 (15)0.00371 (10)0.00684 (14)
O10.0412 (19)0.067 (3)0.084 (3)−0.0058 (19)−0.0255 (19)0.011 (2)
O20.059 (2)0.086 (3)0.0255 (15)0.027 (2)0.0000 (14)−0.0027 (17)
N10.0382 (19)0.044 (2)0.0372 (19)0.0059 (17)−0.0102 (16)−0.0042 (17)
N20.0365 (19)0.037 (2)0.053 (2)−0.0016 (16)−0.0128 (17)0.0076 (18)
C10.0314 (19)0.050 (3)0.0293 (18)0.0038 (19)0.0014 (15)−0.0053 (19)
C20.039 (2)0.045 (3)0.0277 (19)0.000 (2)−0.0013 (16)−0.0041 (18)
C30.0301 (19)0.038 (2)0.0325 (19)0.0010 (17)−0.0032 (16)−0.0035 (17)
C40.0287 (19)0.044 (3)0.035 (2)0.0003 (18)0.0036 (16)0.0006 (19)
C50.0327 (19)0.041 (2)0.0249 (16)−0.0051 (18)0.0025 (14)0.0026 (17)
C60.0268 (17)0.043 (2)0.0316 (18)0.0002 (17)−0.0023 (14)0.0017 (18)
C70.031 (2)0.043 (3)0.044 (2)0.0021 (19)−0.0029 (18)−0.004 (2)
C80.035 (2)0.039 (2)0.044 (2)0.0025 (19)−0.0085 (18)−0.001 (2)
C90.039 (2)0.051 (3)0.046 (3)0.008 (2)−0.004 (2)−0.002 (2)
C100.044 (3)0.052 (3)0.042 (2)0.007 (2)−0.008 (2)0.000 (2)
C110.034 (2)0.034 (2)0.052 (3)−0.0049 (18)−0.0112 (19)0.004 (2)
C120.037 (2)0.062 (3)0.052 (3)0.010 (2)−0.002 (2)0.004 (3)
C130.046 (3)0.069 (4)0.042 (3)0.010 (3)−0.002 (2)0.006 (3)
C140.049 (3)0.067 (4)0.060 (3)0.000 (3)−0.016 (3)0.014 (3)
C150.056 (3)0.075 (4)0.072 (4)0.003 (3)−0.024 (3)0.019 (3)
C160.039 (3)0.071 (4)0.085 (5)0.005 (3)−0.017 (3)0.012 (4)
C170.037 (2)0.062 (4)0.073 (4)0.003 (2)−0.010 (2)0.011 (3)
I1—C12.092 (4)C8—C91.376 (7)
I2—C52.097 (4)C8—C131.387 (7)
O1—C151.412 (7)C9—C101.389 (6)
O1—C161.415 (8)C9—H90.9300
O2—C21.325 (5)C10—C111.393 (7)
O2—H20.8200C10—H100.9300
N1—C71.282 (6)C11—C121.392 (7)
N1—C81.417 (6)C12—C131.376 (7)
N2—C111.403 (6)C12—H120.9300
N2—C141.447 (7)C13—H130.9300
N2—C171.455 (7)C14—C151.525 (7)
C1—C61.372 (6)C14—H14A0.9700
C1—C21.401 (6)C14—H14B0.9700
C2—C31.411 (6)C15—H15A0.9700
C3—C41.393 (6)C15—H15B0.9700
C3—C71.445 (6)C16—C171.504 (7)
C4—C51.369 (6)C16—H16A0.9700
C4—H40.9300C16—H16B0.9700
C5—C61.394 (6)C17—H17A0.9700
C6—H60.9300C17—H17B0.9700
C7—H70.9300
C15—O1—C16107.7 (4)C11—C10—H10119.4
C2—O2—H2109.5C12—C11—C10116.7 (4)
C7—N1—C8124.1 (4)C12—C11—N2120.9 (5)
C11—N2—C14117.0 (4)C10—C11—N2122.3 (5)
C11—N2—C17117.0 (4)C13—C12—C11122.1 (5)
C14—N2—C17113.0 (4)C13—C12—H12118.9
C6—C1—C2122.0 (4)C11—C12—H12118.9
C6—C1—I1119.4 (3)C12—C13—C8120.7 (5)
C2—C1—I1118.6 (3)C12—C13—H13119.7
O2—C2—C1120.9 (4)C8—C13—H13119.7
O2—C2—C3121.3 (4)N2—C14—C15110.8 (5)
C1—C2—C3117.8 (4)N2—C14—H14A109.5
C4—C3—C2119.8 (4)C15—C14—H14A109.5
C4—C3—C7120.1 (4)N2—C14—H14B109.5
C2—C3—C7120.2 (4)C15—C14—H14B109.5
C5—C4—C3120.8 (4)H14A—C14—H14B108.1
C5—C4—H4119.6O1—C15—C14112.2 (5)
C3—C4—H4119.6O1—C15—H15A109.2
C4—C5—C6120.5 (4)C14—C15—H15A109.2
C4—C5—I2120.2 (3)O1—C15—H15B109.2
C6—C5—I2119.3 (3)C14—C15—H15B109.2
C1—C6—C5119.2 (4)H15A—C15—H15B107.9
C1—C6—H6120.4O1—C16—C17112.1 (5)
C5—C6—H6120.4O1—C16—H16A109.2
N1—C7—C3121.7 (4)C17—C16—H16A109.2
N1—C7—H7119.1O1—C16—H16B109.2
C3—C7—H7119.1C17—C16—H16B109.2
C9—C8—C13118.1 (4)H16A—C16—H16B107.9
C9—C8—N1117.4 (4)N2—C17—C16111.4 (5)
C13—C8—N1124.4 (4)N2—C17—H17A109.3
C8—C9—C10121.3 (5)C16—C17—H17A109.3
C8—C9—H9119.4N2—C17—H17B109.3
C10—C9—H9119.4C16—C17—H17B109.3
C9—C10—C11121.1 (5)H17A—C17—H17B108.0
C9—C10—H10119.4
C6—C1—C2—O2−179.9 (5)N1—C8—C9—C10178.4 (5)
I1—C1—C2—O20.0 (7)C8—C9—C10—C110.1 (8)
C6—C1—C2—C30.1 (7)C9—C10—C11—C120.9 (8)
I1—C1—C2—C3180.0 (3)C9—C10—C11—N2179.4 (5)
O2—C2—C3—C4−179.9 (5)C14—N2—C11—C12−163.6 (5)
C1—C2—C3—C40.1 (7)C17—N2—C11—C12−24.8 (7)
O2—C2—C3—C7−1.2 (7)C14—N2—C11—C1017.9 (7)
C1—C2—C3—C7178.8 (4)C17—N2—C11—C10156.7 (5)
C2—C3—C4—C5−0.2 (7)C10—C11—C12—C13−1.3 (8)
C7—C3—C4—C5−178.9 (4)N2—C11—C12—C13−179.9 (5)
C3—C4—C5—C60.2 (7)C11—C12—C13—C80.7 (9)
C3—C4—C5—I2−179.6 (3)C9—C8—C13—C120.4 (8)
C2—C1—C6—C5−0.1 (7)N1—C8—C13—C12−178.8 (5)
I1—C1—C6—C5180.0 (3)C11—N2—C14—C15−172.1 (5)
C4—C5—C6—C1−0.1 (7)C17—N2—C14—C1547.5 (6)
I2—C5—C6—C1179.8 (3)C16—O1—C15—C1461.6 (7)
C8—N1—C7—C3−178.5 (4)N2—C14—C15—O1−55.3 (7)
C4—C3—C7—N1178.5 (5)C15—O1—C16—C17−61.9 (6)
C2—C3—C7—N1−0.2 (7)C11—N2—C17—C16171.5 (5)
C7—N1—C8—C9−177.4 (5)C14—N2—C17—C16−48.1 (7)
C7—N1—C8—C131.7 (8)O1—C16—C17—N255.7 (7)
C13—C8—C9—C10−0.8 (8)
D—H···AD—HH···AD···AD—H···A
O2—H2···N10.821.822.548 (5)146
C6—H6···O1i0.932.503.413 (5)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N10.821.822.548 (5)146
C6—H6⋯O1i0.932.503.413 (5)166

Symmetry code: (i) .

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