| Literature DB >> 26279855 |
Augusto Rivera1, Jicli José Rojas1, Jaime Ríos-Motta1, Michael Bolte2.
Abstract
In the crystal of the title co-crystalline adduct, C8H16N4·C8H9ClO, (I), prepared by solid-state reaction, the mol-ecules are linked by inter-molecular O-H⋯Entities:
Keywords: C—H⋯π interactions; TATD; co-crystalline adducts; crystal structure; hydrogen bonding
Year: 2015 PMID: 26279855 PMCID: PMC4518940 DOI: 10.1107/S2056989015010257
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1Perspective view of the title compound, with displacement ellipsoids drawn at the 50% probability level. The hydrogen bond is drawn as a dashed line.
Selected geometric parameters (, )
| N1C1 | 1.470(2) | N3C7 | 1.455(2) |
| N1C5 | 1.470(2) | N3C4 | 1.458(2) |
| N1C3 | 1.480(2) | N4C5 | 1.444(2) |
| N2C2 | 1.449(3) | N4C6 | 1.456(2) |
| N2C6 | 1.454(3) | N4C8 | 1.457(3) |
| N2C4 | 1.462(2) | Cl1C14 | 1.7534(16) |
| N3C3 | 1.446(2) | O11C11 | 1.356(2) |
| N1C1C2N2 | 10.4(3) | N3C7C8N4 | 9.0(3) |
Hydrogen-bond geometry (, )
Cg8 is the centroid of the C11C16 ring.
|
|
| H |
|
|
|---|---|---|---|---|
| O11H11N1 | 0.85(4) | 1.92(4) | 2.752(2) | 165(3) |
| C3H3 | 0.99 | 2.89 | 3.837(2) | 160 |
| C8H8 | 0.99 | 2.88 | 3.814(2) | 157 |
Symmetry codes: (i) ; (ii) .
Figure 2Packing diagram of the title compound. Only H atoms involved in hydrogen bonding are shown. Hydrogen bonds are drawn as dashed lines.
Figure 3Partial packing diagram of the title compound, viewed along the b axis. Only H atoms involved in hydrogen bonding are shown. Hydrogen bonds are drawn as dashed lines and the short Cl⋯N contacts are shown as dotted lines. Atoms with suffix A are generated by the symmetry operator (x, −y, z − ) and atoms with suffix B are generated by the symmetry operator (x, −y, z + ).
Experimental details
| Crystal data | |
| Chemical formula | C8H16N4C8H9ClO |
|
| 324.85 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 173 |
|
| 25.6048(18), 7.5295(7), 18.2317(13) |
| () | 111.080(5) |
|
| 3279.7(5) |
|
| 8 |
| Radiation type | Mo |
| (mm1) | 0.24 |
| Crystal size (mm) | 0.27 0.26 0.22 |
| Data collection | |
| Diffractometer | Stoe |
| Absorption correction | Multi-scan ( |
|
| 0.738, 1.000 |
| No. of measured, independent and observed [ | 14414, 3066, 2512 |
|
| 0.083 |
| (sin /)max (1) | 0.608 |
| Refinement | |
|
| 0.040, 0.107, 1.02 |
| No. of reflections | 3066 |
| No. of parameters | 205 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| max, min (e 3) | 0.26, 0.25 |
Computer programs: X-AREA (Stoe Cie, 2001 ▸), SHELXS97 and XP in SHELXTL-Plus (Sheldrick, 2008 ▸) and SHELXL2014 (Sheldrick, 2015 ▸).
| C8H16N4·C8H9ClO | |
| Monoclinic, | Mo |
| Cell parameters from 12525 reflections | |
| θ = 3.4–25.8° | |
| µ = 0.24 mm−1 | |
| β = 111.080 (5)° | |
| Block, colourless | |
| 0.27 × 0.26 × 0.22 mm |
| Stoe IPDS II two-circle diffractometer | 2512 reflections with |
| Radiation source: Genix 3D IµS microfocus X-ray source | |
| ω scans | θmax = 25.6°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 14414 measured reflections | |
| 3066 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3066 reflections | Δρmax = 0.26 e Å−3 |
| 205 parameters | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| N1 | 0.37029 (5) | 0.56339 (18) | 0.36779 (8) | 0.0224 (3) | |
| N2 | 0.30414 (6) | 0.8359 (2) | 0.26828 (9) | 0.0297 (3) | |
| N3 | 0.40890 (6) | 0.84503 (19) | 0.33226 (9) | 0.0260 (3) | |
| N4 | 0.35050 (6) | 0.58696 (19) | 0.22295 (9) | 0.0299 (3) | |
| C1 | 0.31697 (7) | 0.6087 (2) | 0.37648 (11) | 0.0313 (4) | |
| H1A | 0.3246 | 0.6345 | 0.4326 | 0.038* | |
| H1B | 0.2924 | 0.5030 | 0.3623 | 0.038* | |
| C2 | 0.28501 (8) | 0.7651 (3) | 0.32812 (14) | 0.0438 (5) | |
| H2A | 0.2455 | 0.7287 | 0.3022 | 0.053* | |
| H2B | 0.2857 | 0.8627 | 0.3649 | 0.053* | |
| C3 | 0.41163 (7) | 0.7098 (2) | 0.38985 (10) | 0.0267 (4) | |
| H3A | 0.4084 | 0.7700 | 0.4363 | 0.032* | |
| H3B | 0.4494 | 0.6559 | 0.4068 | 0.032* | |
| C4 | 0.35575 (8) | 0.9394 (2) | 0.29998 (12) | 0.0333 (4) | |
| H4A | 0.3578 | 1.0180 | 0.2575 | 0.040* | |
| H4B | 0.3524 | 1.0170 | 0.3419 | 0.040* | |
| C5 | 0.36300 (7) | 0.4777 (2) | 0.29227 (11) | 0.0285 (4) | |
| H5A | 0.3977 | 0.4111 | 0.2989 | 0.034* | |
| H5B | 0.3325 | 0.3894 | 0.2818 | 0.034* | |
| C6 | 0.30356 (8) | 0.7083 (3) | 0.20810 (12) | 0.0376 (5) | |
| H6A | 0.2997 | 0.7761 | 0.1599 | 0.045* | |
| H6B | 0.2693 | 0.6355 | 0.1961 | 0.045* | |
| C7 | 0.43347 (9) | 0.7933 (3) | 0.27484 (12) | 0.0386 (5) | |
| H7A | 0.4705 | 0.7391 | 0.3032 | 0.046* | |
| H7B | 0.4399 | 0.9020 | 0.2487 | 0.046* | |
| C8 | 0.39926 (10) | 0.6640 (3) | 0.21162 (13) | 0.0430 (5) | |
| H8A | 0.3865 | 0.7265 | 0.1604 | 0.052* | |
| H8B | 0.4241 | 0.5661 | 0.2084 | 0.052* | |
| Cl1 | 0.35337 (2) | −0.26689 (6) | 0.61168 (3) | 0.03412 (16) | |
| O11 | 0.43692 (5) | 0.32897 (19) | 0.47753 (9) | 0.0390 (4) | |
| H11 | 0.4116 (15) | 0.396 (5) | 0.447 (2) | 0.084 (10)* | |
| C11 | 0.41519 (7) | 0.1923 (2) | 0.50578 (10) | 0.0257 (4) | |
| C12 | 0.45255 (7) | 0.0659 (2) | 0.55103 (10) | 0.0261 (4) | |
| H12 | 0.4913 | 0.0774 | 0.5597 | 0.031* | |
| C13 | 0.43430 (7) | −0.0768 (2) | 0.58371 (10) | 0.0250 (4) | |
| C14 | 0.37708 (7) | −0.0899 (2) | 0.56943 (10) | 0.0237 (3) | |
| C15 | 0.33830 (7) | 0.0318 (2) | 0.52312 (10) | 0.0229 (3) | |
| C16 | 0.35825 (7) | 0.1742 (2) | 0.49162 (10) | 0.0245 (4) | |
| H16 | 0.3327 | 0.2597 | 0.4601 | 0.029* | |
| C17 | 0.27635 (7) | 0.0110 (2) | 0.50600 (12) | 0.0311 (4) | |
| H17A | 0.2638 | −0.1047 | 0.4813 | 0.047* | |
| H17B | 0.2559 | 0.1057 | 0.4704 | 0.047* | |
| H17C | 0.2692 | 0.0185 | 0.5552 | 0.047* | |
| C18 | 0.47576 (8) | −0.2148 (3) | 0.63056 (13) | 0.0388 (5) | |
| H18A | 0.4719 | −0.2311 | 0.6817 | 0.058* | |
| H18B | 0.5139 | −0.1753 | 0.6384 | 0.058* | |
| H18C | 0.4684 | −0.3277 | 0.6019 | 0.058* |
| N1 | 0.0202 (6) | 0.0238 (7) | 0.0228 (7) | −0.0040 (5) | 0.0074 (5) | 0.0018 (5) |
| N2 | 0.0289 (7) | 0.0269 (7) | 0.0311 (8) | 0.0034 (6) | 0.0080 (6) | 0.0026 (6) |
| N3 | 0.0285 (7) | 0.0250 (7) | 0.0264 (8) | −0.0061 (6) | 0.0122 (6) | −0.0009 (6) |
| N4 | 0.0394 (8) | 0.0270 (7) | 0.0227 (8) | −0.0012 (6) | 0.0104 (6) | −0.0047 (6) |
| C1 | 0.0261 (8) | 0.0386 (10) | 0.0328 (10) | −0.0012 (7) | 0.0152 (8) | 0.0041 (8) |
| C2 | 0.0350 (10) | 0.0483 (11) | 0.0558 (14) | 0.0129 (9) | 0.0259 (10) | 0.0134 (10) |
| C3 | 0.0243 (8) | 0.0289 (8) | 0.0233 (9) | −0.0075 (6) | 0.0042 (7) | 0.0006 (7) |
| C4 | 0.0402 (10) | 0.0206 (8) | 0.0367 (11) | 0.0003 (7) | 0.0108 (8) | 0.0009 (7) |
| C5 | 0.0331 (9) | 0.0206 (8) | 0.0309 (10) | −0.0020 (6) | 0.0106 (7) | −0.0034 (7) |
| C6 | 0.0410 (10) | 0.0353 (10) | 0.0247 (10) | 0.0032 (8) | −0.0024 (8) | −0.0014 (8) |
| C7 | 0.0408 (10) | 0.0466 (11) | 0.0376 (11) | −0.0112 (8) | 0.0252 (9) | −0.0016 (9) |
| C8 | 0.0609 (13) | 0.0429 (11) | 0.0379 (12) | −0.0081 (10) | 0.0333 (11) | −0.0079 (9) |
| Cl1 | 0.0372 (2) | 0.0318 (2) | 0.0342 (3) | −0.00899 (18) | 0.01382 (19) | 0.00941 (18) |
| O11 | 0.0250 (6) | 0.0406 (8) | 0.0481 (9) | −0.0075 (6) | 0.0090 (6) | 0.0216 (7) |
| C11 | 0.0256 (8) | 0.0271 (8) | 0.0240 (9) | −0.0081 (7) | 0.0084 (7) | 0.0023 (7) |
| C12 | 0.0194 (7) | 0.0308 (9) | 0.0256 (9) | −0.0054 (6) | 0.0049 (6) | 0.0012 (7) |
| C13 | 0.0267 (8) | 0.0260 (8) | 0.0197 (8) | −0.0027 (6) | 0.0051 (7) | 0.0003 (6) |
| C14 | 0.0298 (8) | 0.0231 (8) | 0.0189 (8) | −0.0077 (6) | 0.0096 (7) | −0.0009 (6) |
| C15 | 0.0251 (8) | 0.0253 (8) | 0.0201 (8) | −0.0051 (6) | 0.0102 (6) | −0.0028 (6) |
| C16 | 0.0240 (8) | 0.0256 (8) | 0.0220 (8) | −0.0011 (6) | 0.0062 (7) | 0.0033 (7) |
| C17 | 0.0255 (9) | 0.0332 (9) | 0.0373 (11) | −0.0038 (7) | 0.0145 (7) | 0.0008 (8) |
| C18 | 0.0325 (9) | 0.0385 (10) | 0.0387 (11) | 0.0028 (8) | 0.0047 (8) | 0.0122 (9) |
| N1—C1 | 1.470 (2) | C7—C8 | 1.522 (3) |
| N1—C5 | 1.470 (2) | C7—H7A | 0.9900 |
| N1—C3 | 1.480 (2) | C7—H7B | 0.9900 |
| N2—C2 | 1.449 (3) | C8—H8A | 0.9900 |
| N2—C6 | 1.454 (3) | C8—H8B | 0.9900 |
| N2—C4 | 1.462 (2) | Cl1—C14 | 1.7534 (16) |
| N3—C3 | 1.446 (2) | O11—C11 | 1.356 (2) |
| N3—C7 | 1.455 (2) | O11—H11 | 0.85 (4) |
| N3—C4 | 1.458 (2) | C11—C12 | 1.391 (2) |
| N4—C5 | 1.444 (2) | C11—C16 | 1.393 (2) |
| N4—C6 | 1.456 (2) | C12—C13 | 1.388 (2) |
| N4—C8 | 1.457 (3) | C12—H12 | 0.9500 |
| C1—C2 | 1.521 (3) | C13—C14 | 1.396 (2) |
| C1—H1A | 0.9900 | C13—C18 | 1.512 (2) |
| C1—H1B | 0.9900 | C14—C15 | 1.391 (2) |
| C2—H2A | 0.9900 | C15—C16 | 1.397 (2) |
| C2—H2B | 0.9900 | C15—C17 | 1.511 (2) |
| C3—H3A | 0.9900 | C16—H16 | 0.9500 |
| C3—H3B | 0.9900 | C17—H17A | 0.9800 |
| C4—H4A | 0.9900 | C17—H17B | 0.9800 |
| C4—H4B | 0.9900 | C17—H17C | 0.9800 |
| C5—H5A | 0.9900 | C18—H18A | 0.9800 |
| C5—H5B | 0.9900 | C18—H18B | 0.9800 |
| C6—H6A | 0.9900 | C18—H18C | 0.9800 |
| C6—H6B | 0.9900 | ||
| C1—N1—C5 | 113.12 (13) | N4—C6—H6B | 107.5 |
| C1—N1—C3 | 113.50 (13) | H6A—C6—H6B | 107.0 |
| C5—N1—C3 | 114.75 (13) | N3—C7—C8 | 115.84 (15) |
| C2—N2—C6 | 114.25 (16) | N3—C7—H7A | 108.3 |
| C2—N2—C4 | 113.62 (17) | C8—C7—H7A | 108.3 |
| C6—N2—C4 | 114.37 (16) | N3—C7—H7B | 108.3 |
| C3—N3—C7 | 114.43 (15) | C8—C7—H7B | 108.3 |
| C3—N3—C4 | 115.49 (14) | H7A—C7—H7B | 107.4 |
| C7—N3—C4 | 114.98 (16) | N4—C8—C7 | 115.87 (15) |
| C5—N4—C6 | 115.37 (15) | N4—C8—H8A | 108.3 |
| C5—N4—C8 | 114.79 (15) | C7—C8—H8A | 108.3 |
| C6—N4—C8 | 114.58 (16) | N4—C8—H8B | 108.3 |
| N1—C1—C2 | 116.37 (15) | C7—C8—H8B | 108.3 |
| N1—C1—H1A | 108.2 | H8A—C8—H8B | 107.4 |
| C2—C1—H1A | 108.2 | C11—O11—H11 | 112 (2) |
| N1—C1—H1B | 108.2 | O11—C11—C12 | 117.13 (15) |
| C2—C1—H1B | 108.2 | O11—C11—C16 | 123.30 (16) |
| H1A—C1—H1B | 107.3 | C12—C11—C16 | 119.58 (15) |
| N2—C2—C1 | 117.66 (15) | C13—C12—C11 | 121.22 (15) |
| N2—C2—H2A | 107.9 | C13—C12—H12 | 119.4 |
| C1—C2—H2A | 107.9 | C11—C12—H12 | 119.4 |
| N2—C2—H2B | 107.9 | C12—C13—C14 | 117.86 (15) |
| C1—C2—H2B | 107.9 | C12—C13—C18 | 119.89 (15) |
| H2A—C2—H2B | 107.2 | C14—C13—C18 | 122.22 (15) |
| N3—C3—N1 | 118.95 (14) | C15—C14—C13 | 122.59 (15) |
| N3—C3—H3A | 107.6 | C15—C14—Cl1 | 118.87 (12) |
| N1—C3—H3A | 107.6 | C13—C14—Cl1 | 118.54 (13) |
| N3—C3—H3B | 107.6 | C14—C15—C16 | 117.92 (14) |
| N1—C3—H3B | 107.6 | C14—C15—C17 | 121.63 (15) |
| H3A—C3—H3B | 107.0 | C16—C15—C17 | 120.45 (15) |
| N3—C4—N2 | 118.66 (14) | C11—C16—C15 | 120.81 (15) |
| N3—C4—H4A | 107.6 | C11—C16—H16 | 119.6 |
| N2—C4—H4A | 107.6 | C15—C16—H16 | 119.6 |
| N3—C4—H4B | 107.6 | C15—C17—H17A | 109.5 |
| N2—C4—H4B | 107.6 | C15—C17—H17B | 109.5 |
| H4A—C4—H4B | 107.1 | H17A—C17—H17B | 109.5 |
| N4—C5—N1 | 118.91 (13) | C15—C17—H17C | 109.5 |
| N4—C5—H5A | 107.6 | H17A—C17—H17C | 109.5 |
| N1—C5—H5A | 107.6 | H17B—C17—H17C | 109.5 |
| N4—C5—H5B | 107.6 | C13—C18—H18A | 109.5 |
| N1—C5—H5B | 107.6 | C13—C18—H18B | 109.5 |
| H5A—C5—H5B | 107.0 | H18A—C18—H18B | 109.5 |
| N2—C6—N4 | 119.39 (15) | C13—C18—H18C | 109.5 |
| N2—C6—H6A | 107.5 | H18A—C18—H18C | 109.5 |
| N4—C6—H6A | 107.5 | H18B—C18—H18C | 109.5 |
| N2—C6—H6B | 107.5 | ||
| C5—N1—C1—C2 | −73.2 (2) | C3—N3—C7—C8 | 74.7 (2) |
| C3—N1—C1—C2 | 59.8 (2) | C4—N3—C7—C8 | −62.5 (2) |
| C6—N2—C2—C1 | 59.7 (2) | C5—N4—C8—C7 | −63.3 (2) |
| C4—N2—C2—C1 | −74.0 (2) | C6—N4—C8—C7 | 73.6 (2) |
| N1—C1—C2—N2 | 10.4 (3) | N3—C7—C8—N4 | −9.0 (3) |
| C7—N3—C3—N1 | −79.67 (19) | O11—C11—C12—C13 | 178.74 (17) |
| C4—N3—C3—N1 | 57.2 (2) | C16—C11—C12—C13 | −1.2 (3) |
| C1—N1—C3—N3 | −84.10 (19) | C11—C12—C13—C14 | 0.3 (3) |
| C5—N1—C3—N3 | 48.1 (2) | C11—C12—C13—C18 | 178.17 (17) |
| C3—N3—C4—N2 | −51.5 (2) | C12—C13—C14—C15 | 1.1 (3) |
| C7—N3—C4—N2 | 85.2 (2) | C18—C13—C14—C15 | −176.72 (17) |
| C2—N2—C4—N3 | 78.8 (2) | C12—C13—C14—Cl1 | −178.85 (13) |
| C6—N2—C4—N3 | −54.8 (2) | C18—C13—C14—Cl1 | 3.3 (2) |
| C6—N4—C5—N1 | −51.7 (2) | C13—C14—C15—C16 | −1.5 (2) |
| C8—N4—C5—N1 | 84.85 (19) | Cl1—C14—C15—C16 | 178.46 (13) |
| C1—N1—C5—N4 | 79.28 (19) | C13—C14—C15—C17 | 177.67 (16) |
| C3—N1—C5—N4 | −53.1 (2) | Cl1—C14—C15—C17 | −2.4 (2) |
| C2—N2—C6—N4 | −83.3 (2) | O11—C11—C16—C15 | −179.15 (17) |
| C4—N2—C6—N4 | 50.0 (2) | C12—C11—C16—C15 | 0.8 (3) |
| C5—N4—C6—N2 | 56.6 (2) | C14—C15—C16—C11 | 0.5 (3) |
| C8—N4—C6—N2 | −80.1 (2) | C17—C15—C16—C11 | −178.67 (17) |
| H··· | ||||
| O11—H11···N1 | 0.85 (4) | 1.92 (4) | 2.752 (2) | 165 (3) |
| C3—H3 | 0.99 | 2.89 | 3.837 (2) | 160 |
| C8—H8 | 0.99 | 2.88 | 3.814 (2) | 157 |