Literature DB >> 26270393

The PURE system for the cell-free synthesis of membrane proteins.

Yutetsu Kuruma1, Takuya Ueda2.   

Abstract

Cell-free gene expression systems are biotechnological tools for the in vitro production of proteins of interest. The addition of membrane vesicles (liposomes) enables the production of membrane proteins, including those in large-molecular-weight complexes, such as the SecYEG translocon or ATP synthase. Here we describe a protocol for the cell-free synthesis of membrane proteins using the protein synthesis using recombinant elements (PURE) system, and for subsequent quantification of products and analyses of membrane localization efficiency, product orientation in the membrane and complex formation in the membrane. In addition, measurements of ATP synthase activity are used as an example to demonstrate the functional nature of the cell-free synthesized proteins. This protocol allows the rapid production and the detailed analysis of membrane proteins, and the complete process from template DNA preparation to activity measurement can be accomplished within 1 d. In contrast to alternative methods using living cells, this protocol can also help to prevent the difficulties in membrane protein purification and the risks of protein aggregation during reconstitution into lipid membranes.

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Year:  2015        PMID: 26270393     DOI: 10.1038/nprot.2015.082

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  37 in total

1.  Functional analysis of membranous Fo-a subunit of F1Fo-ATP synthase by in vitro protein synthesis.

Authors:  Yutetsu Kuruma; Toshiharu Suzuki; Sakurako Ono; Masasuke Yoshida; Takuya Ueda
Journal:  Biochem J       Date:  2012-03-15       Impact factor: 3.857

2.  F0F1-ATPase/synthase is geared to the synthesis mode by conformational rearrangement of epsilon subunit in response to proton motive force and ADP/ATP balance.

Authors:  Toshiharu Suzuki; Tomoe Murakami; Ryota Iino; Junko Suzuki; Sakurako Ono; Yasuo Shirakihara; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2003-07-24       Impact factor: 5.157

3.  A vesicle bioreactor as a step toward an artificial cell assembly.

Authors:  Vincent Noireaux; Albert Libchaber
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-10       Impact factor: 11.205

4.  Gene position more strongly influences cell-free protein expression from operons than T7 transcriptional promoter strength.

Authors:  Fabio Chizzolini; Michele Forlin; Dario Cecchi; Sheref S Mansy
Journal:  ACS Synth Biol       Date:  2013-12-09       Impact factor: 5.110

5.  Practical cell-free protein synthesis system using purified wheat embryos.

Authors:  Kazuyuki Takai; Tatsuya Sawasaki; Yaeta Endo
Journal:  Nat Protoc       Date:  2010-01-21       Impact factor: 13.491

6.  A single copy of SecYEG is sufficient for preprotein translocation.

Authors:  Alexej Kedrov; Ilja Kusters; Victor V Krasnikov; Arnold J M Driessen
Journal:  EMBO J       Date:  2011-09-06       Impact factor: 11.598

7.  UncI protein can mediate ring-assembly of c-subunits of FoF1-ATP synthase in vitro.

Authors:  Yoko Ozaki; Toshiharu Suzuki; Yutetsu Kuruma; Takuya Ueda; Masasuke Yoshida
Journal:  Biochem Biophys Res Commun       Date:  2008-01-07       Impact factor: 3.575

8.  A synthetic biology approach to the construction of membrane proteins in semi-synthetic minimal cells.

Authors:  Yutetsu Kuruma; Pasquale Stano; Takuya Ueda; Pier Luigi Luisi
Journal:  Biochim Biophys Acta       Date:  2008-11-05

Review 9.  Coupling H(+) transport to rotary catalysis in F-type ATP synthases: structure and organization of the transmembrane rotary motor.

Authors:  R H Fillingame; W Jiang; O Y Dmitriev
Journal:  J Exp Biol       Date:  2000-01       Impact factor: 3.312

10.  Cooperative working of bacterial chromosome replication proteins generated by a reconstituted protein expression system.

Authors:  Kei Fujiwara; Tsutomu Katayama; Shin-Ichiro M Nomura
Journal:  Nucleic Acids Res       Date:  2013-06-03       Impact factor: 16.971

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  35 in total

1.  Probing membrane protein properties using droplet interface bilayers.

Authors:  Maxwell Allen-Benton; Heather E Findlay; Paula J Booth
Journal:  Exp Biol Med (Maywood)       Date:  2019-05-03

2.  Cell-Free Expression of a Plant Membrane Protein BrPT2 From Boesenbergia Rotunda.

Authors:  Yvonne Jing Mei Liew; Yean Kee Lee; Norzulaani Khalid; Noorsaadah Abd Rahman; Boon Chin Tan
Journal:  Mol Biotechnol       Date:  2021-02-09       Impact factor: 2.695

3.  Integration of cell-free protein synthesis and purification in one microfluidic chip for on-demand production of recombinant protein.

Authors:  Xiao Xiao; Yuan Zhou; Yuqiong Sun; Qing Wang; Jianbo Liu; Jin Huang; Xiaobei Zhu; Xiaohai Yang; Kemin Wang
Journal:  Biomicrofluidics       Date:  2018-09-13       Impact factor: 2.800

Review 4.  Current strategies for protein production and purification enabling membrane protein structural biology.

Authors:  Aditya Pandey; Kyungsoo Shin; Robin E Patterson; Xiang-Qin Liu; Jan K Rainey
Journal:  Biochem Cell Biol       Date:  2016-01-20       Impact factor: 3.626

5.  A Streptomyces venezuelae Cell-Free Toolkit for Synthetic Biology.

Authors:  Simon J Moore; Hung-En Lai; Soo-Mei Chee; Ming Toh; Seth Coode; Kameshwari Chengan; Patrick Capel; Christophe Corre; Emmanuel Lc de Los Santos; Paul S Freemont
Journal:  ACS Synth Biol       Date:  2021-01-26       Impact factor: 5.110

6.  Cell-Free Membrane Protein Expression into Hybrid Lipid/Polymer Vesicles.

Authors:  Miranda L Jacobs; Neha P Kamat
Journal:  Methods Mol Biol       Date:  2022

7.  Best Practices for DNA Template Preparation Toward Improved Reproducibility in Cell-Free Protein Production.

Authors:  Eugenia F Romantseva; Drew S Tack; Nina Alperovich; David Ross; Elizabeth A Strychalski
Journal:  Methods Mol Biol       Date:  2022

8.  Effects of DNA template preparation on variability in cell-free protein production.

Authors:  Eugenia Romantseva; Nina Alperovich; David Ross; Steven P Lund; Elizabeth A Strychalski
Journal:  Synth Biol (Oxf)       Date:  2022-08-13

9.  Controlling Secretion in Artificial Cells with a Membrane AND Gate.

Authors:  Claire E Hilburger; Miranda L Jacobs; Kamryn R Lewis; Justin A Peruzzi; Neha P Kamat
Journal:  ACS Synth Biol       Date:  2019-05-14       Impact factor: 5.110

10.  Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis.

Authors:  Justin T Marinko; Hui Huang; Wesley D Penn; John A Capra; Jonathan P Schlebach; Charles R Sanders
Journal:  Chem Rev       Date:  2019-01-04       Impact factor: 60.622

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