Literature DB >> 26261686

Long non-coding RNAs era in liver cancer.

Francesca Guerrieri1.   

Abstract

Hepatocellular carcinoma (HCC) is one of the most common malignancies leading to high mortality rates in the general population and the sixth most common cancer worldwide. HCC is characterized by deregulation of multiple genes and signalling pathways. These genetic effects can involve both protein coding genes as well as non-coding RNA genes. Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt, constituting a subpopulation of ncRNAs. Their biological effects are not well understood compared to small non-coding RNA (microRNAs), but they have been recently recognized to exert a crucial role in the regulation of gene expression and modulation of signalling pathways. Notably, several studies indicated that lncRNAs contribute to the pathogenesis and progression of HCC. Investigating the molecular mechanisms underlying lncRNAs expression opens potential applications in diagnosis and treatment of liver disease. This editorial provides three examples (MALAT-1 metastasis associated lung adenocarcinoma transcript, HULC highly upregulated in liver cancer and HOTAIR HOX transcript antisense intergenic RNA) of well-known lncRNAs upregulated in HCC, whose mechanisms of action are known, and for which therapeutic applications are delineated. Targeting of lncRNAs using several approaches (siRNA-mediated silencing or changing their secondary structure) offers new possibility to treat HCC.

Entities:  

Keywords:  Epigenetics; Hepatocellular carcinoma; Liver; Long non-coding RNAs; Sequencing

Year:  2015        PMID: 26261686      PMCID: PMC4528270          DOI: 10.4254/wjh.v7.i16.1971

Source DB:  PubMed          Journal:  World J Hepatol


  13 in total

1.  Elevation of highly up-regulated in liver cancer (HULC) by hepatitis B virus X protein promotes hepatoma cell proliferation via down-regulating p18.

Authors:  Yumei Du; Guangyao Kong; Xiaona You; Shuai Zhang; Tao Zhang; Yuen Gao; Lihong Ye; Xiaodong Zhang
Journal:  J Biol Chem       Date:  2012-06-08       Impact factor: 5.157

2.  Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation.

Authors:  Ming-chun Lai; Zhe Yang; Lin Zhou; Qian-qian Zhu; Hai-yang Xie; Feng Zhang; Li-ming Wu; Lei-ming Chen; Shu-sen Zheng
Journal:  Med Oncol       Date:  2011-06-16       Impact factor: 3.064

3.  Long noncoding RNA as modular scaffold of histone modification complexes.

Authors:  Miao-Chih Tsai; Ohad Manor; Yue Wan; Nima Mosammaparast; Jordon K Wang; Fei Lan; Yang Shi; Eran Segal; Howard Y Chang
Journal:  Science       Date:  2010-07-08       Impact factor: 47.728

Review 4.  Modular regulatory principles of large non-coding RNAs.

Authors:  Mitchell Guttman; John L Rinn
Journal:  Nature       Date:  2012-02-15       Impact factor: 49.962

Review 5.  Long noncoding RNAs: cellular address codes in development and disease.

Authors:  Pedro J Batista; Howard Y Chang
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

Review 6.  The multilayered complexity of ceRNA crosstalk and competition.

Authors:  Yvonne Tay; John Rinn; Pier Paolo Pandolfi
Journal:  Nature       Date:  2014-01-16       Impact factor: 49.962

7.  The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Authors:  Thomas Derrien; Rory Johnson; Giovanni Bussotti; Andrea Tanzer; Sarah Djebali; Hagen Tilgner; Gregory Guernec; David Martin; Angelika Merkel; David G Knowles; Julien Lagarde; Lavanya Veeravalli; Xiaoan Ruan; Yijun Ruan; Timo Lassmann; Piero Carninci; James B Brown; Leonard Lipovich; Jose M Gonzalez; Mark Thomas; Carrie A Davis; Ramin Shiekhattar; Thomas R Gingeras; Tim J Hubbard; Cedric Notredame; Jennifer Harrow; Roderic Guigó
Journal:  Genome Res       Date:  2012-09       Impact factor: 9.043

8.  CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer.

Authors:  Jiayi Wang; Xiangfan Liu; Huacheng Wu; Peihua Ni; Zhidong Gu; Yongxia Qiao; Ning Chen; Fenyong Sun; Qishi Fan
Journal:  Nucleic Acids Res       Date:  2010-04-27       Impact factor: 16.971

9.  A genetic variant in long non-coding RNA HULC contributes to risk of HBV-related hepatocellular carcinoma in a Chinese population.

Authors:  Yao Liu; Shandong Pan; Li Liu; Xiangjun Zhai; Jibin Liu; Juan Wen; Yixin Zhang; Jianguo Chen; Hongbing Shen; Zhibin Hu
Journal:  PLoS One       Date:  2012-04-06       Impact factor: 3.240

10.  Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB.

Authors:  Vidisha Tripathi; Zhen Shen; Arindam Chakraborty; Sumanprava Giri; Susan M Freier; Xiaolin Wu; Yongqing Zhang; Myriam Gorospe; Supriya G Prasanth; Ashish Lal; Kannanganattu V Prasanth
Journal:  PLoS Genet       Date:  2013-03-21       Impact factor: 5.917

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  13 in total

1.  Up-regulation of SNHG6 activates SERPINH1 expression by competitive binding to miR-139-5p to promote hepatocellular carcinoma progression.

Authors:  Gang Wu; Xueming Ju; Youyu Wang; Zhixi Li; Xianfeng Gan
Journal:  Cell Cycle       Date:  2019-07-01       Impact factor: 4.534

2.  The Differential Expression and Possible Function of Long Noncoding RNAs in Liver Cells Infected by Dengue Virus.

Authors:  Xiao-Jun Wang; Shi-Chen Jiang; Hai-Xia Wei; Sheng-Qun Deng; Cheng He; Hong-Juan Peng
Journal:  Am J Trop Med Hyg       Date:  2017-09-28       Impact factor: 2.345

3.  Toward Colorectal Cancer Biomarkers: The Role of Genetic Variation, Wnt Pathway, and Long Noncoding RNAs.

Authors:  Amany I Abdel-Motaleb; Hassan M Azzazy; Ahmed Moustafa
Journal:  OMICS       Date:  2021-04-22

4.  Down-regulated LncR-MALAT1 suppressed cell proliferation and migration by inactivating autophagy in bladder cancer.

Authors:  Jiude Qi; Yanfeng Chu; Guangyan Zhang; Hongjun Li; Dongdong Yang; Qi Wang
Journal:  RSC Adv       Date:  2018-09-04       Impact factor: 4.036

Review 5.  Long non-coding RNAs in hepatocellular carcinoma: Potential roles and clinical implications.

Authors:  Zhao-Shan Niu; Xiao-Jun Niu; Wen-Hong Wang
Journal:  World J Gastroenterol       Date:  2017-08-28       Impact factor: 5.742

6.  Hepatitis B virus X protein influences enrichment profiles of H3K9me3 on promoter regions in human hepatoma cell lines.

Authors:  Di-Yi Wang; Shu-Hong An; Lei Liu; Shan-Shan Bai; Kai-Xiang Wu; Rong Zhu; Zhao-Jin Wang
Journal:  Oncotarget       Date:  2016-12-20

7.  Association of tagSNPs at lncRNA MALAT-1 with HCC Susceptibility in a Southern Chinese Population.

Authors:  Xiaohui Ji; Junguo Zhang; Li Liu; Ziqiang Lin; Lucheng Pi; Zhifeng Lin; Nana Tian; Xinqi Lin; Sidong Chen; Xinfa Yu; Yanhui Gao
Journal:  Sci Rep       Date:  2019-07-26       Impact factor: 4.379

Review 8.  PRINS, a primate-specific long non-coding RNA, plays a role in the keratinocyte stress response and psoriasis pathogenesis.

Authors:  Márta Széll; Judit Danis; Zsuzsanna Bata-Csörgő; Lajos Kemény
Journal:  Pflugers Arch       Date:  2016-03-03       Impact factor: 3.657

9.  Comprehensive Network Analysis Reveals Alternative Splicing-Related lncRNAs in Hepatocellular Carcinoma.

Authors:  Junqing Wang; Xiuquan Wang; Akshay Bhat; Yixin Chen; Keli Xu; Yin-Yuan Mo; Song Stephen Yi; Yunyun Zhou
Journal:  Front Genet       Date:  2020-07-15       Impact factor: 4.599

10.  Knockdown long non-coding RNA ANRIL inhibits proliferation, migration and invasion of HepG2 cells by down-regulation of miR-191.

Authors:  Deyu Huang; Chunhua Bi; Qingxi Zhao; Xueli Ding; Cheng Bian; Hui Wang; Ting Wang; Hua Liu
Journal:  BMC Cancer       Date:  2018-09-24       Impact factor: 4.430

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