Literature DB >> 23498938

Long noncoding RNAs: cellular address codes in development and disease.

Pedro J Batista1, Howard Y Chang.   

Abstract

In biology as in real estate, location is a cardinal organizational principle that dictates the accessibility and flow of informational traffic. An essential question in nuclear organization is the nature of the address code--how objects are placed and later searched for and retrieved. Long noncoding RNAs (lncRNAs) have emerged as key components of the address code, allowing protein complexes, genes, and chromosomes to be trafficked to appropriate locations and subject to proper activation and deactivation. lncRNA-based mechanisms control cell fates during development, and their dysregulation underlies some human disorders caused by chromosomal deletions and translocations.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23498938      PMCID: PMC3651923          DOI: 10.1016/j.cell.2013.02.012

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  102 in total

1.  Immobilization of proteins in the nucleolus by ribosomal intergenic spacer noncoding RNA.

Authors:  Timothy E Audas; Mathieu D Jacob; Stephen Lee
Journal:  Mol Cell       Date:  2012-01-27       Impact factor: 17.970

2.  Positional information and patterning revisited.

Authors:  Lewis Wolpert
Journal:  J Theor Biol       Date:  2010-10-31       Impact factor: 2.691

3.  Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.

Authors:  Lucia A Hindorff; Praveen Sethupathy; Heather A Junkins; Erin M Ramos; Jayashri P Mehta; Francis S Collins; Teri A Manolio
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

4.  Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution.

Authors:  Irina Solovei; Moritz Kreysing; Christian Lanctôt; Süleyman Kösem; Leo Peichl; Thomas Cremer; Jochen Guck; Boris Joffe
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

5.  Noncoding transcripts in sense and antisense orientation regulate the epigenetic state of ribosomal RNA genes.

Authors:  H Bierhoff; K Schmitz; F Maass; J Ye; I Grummt
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2011-04-18

6.  HELLP babies link a novel lincRNA to the trophoblast cell cycle.

Authors:  Marie van Dijk; Hari K Thulluru; Joyce Mulders; Omar J Michel; Ankie Poutsma; Sandra Windhorst; Gunilla Kleiverda; Daoud Sie; Augusta M A Lachmeijer; Cees B M Oudejans
Journal:  J Clin Invest       Date:  2012-10-24       Impact factor: 14.808

7.  The noncoding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting MLL1 to chromatin.

Authors:  Stéphane Bertani; Silvia Sauer; Eugene Bolotin; Frank Sauer
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

8.  Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs.

Authors:  Jessica A Brown; Max L Valenstein; Therese A Yario; Kazimierz T Tycowski; Joan A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

9.  The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation.

Authors:  Di Tian; Sha Sun; Jeannie T Lee
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

10.  RYBP-PRC1 complexes mediate H2A ubiquitylation at polycomb target sites independently of PRC2 and H3K27me3.

Authors:  Lígia Tavares; Emilia Dimitrova; David Oxley; Judith Webster; Raymond Poot; Jeroen Demmers; Karel Bezstarosti; Stephen Taylor; Hiroki Ura; Hiroshi Koide; Anton Wutz; Miguel Vidal; Sarah Elderkin; Neil Brockdorff
Journal:  Cell       Date:  2012-02-09       Impact factor: 41.582

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  1100 in total

1.  Alu element-containing RNAs maintain nucleolar structure and function.

Authors:  Maïwen Caudron-Herger; Teresa Pankert; Jeanette Seiler; Attila Németh; Renate Voit; Ingrid Grummt; Karsten Rippe
Journal:  EMBO J       Date:  2015-10-13       Impact factor: 11.598

Review 2.  Circadian mRNA expression: insights from modeling and transcriptomics.

Authors:  Sarah Lück; Pål O Westermark
Journal:  Cell Mol Life Sci       Date:  2015-10-26       Impact factor: 9.261

Review 3.  LncRNAs: emerging players in gene regulation and disease pathogenesis.

Authors:  Mina Kazemzadeh; Reza Safaralizadeh; Ayla Valinezhad Orang
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

4.  Long non-coding RNA PCAT1 drives clear cell renal cell carcinoma by upregulating YAP via sponging miR-656 and miR-539.

Authors:  Rui Wang; Bin Zheng; Hongyan Liu; Xiuxian Wan
Journal:  Cell Cycle       Date:  2020-04-14       Impact factor: 4.534

Review 5.  Astrocyte-derived extracellular vesicles: Neuroreparative properties and role in the pathogenesis of neurodegenerative disorders.

Authors:  Raghavendra Upadhya; Winston Zingg; Siddhant Shetty; Ashok K Shetty
Journal:  J Control Release       Date:  2020-04-11       Impact factor: 9.776

6.  Integrative Transcriptome Analyses of Metabolic Responses in Mice Define Pivotal LncRNA Metabolic Regulators.

Authors:  Ling Yang; Ping Li; Wenjing Yang; Xiangbo Ruan; Kurtis Kiesewetter; Jun Zhu; Haiming Cao
Journal:  Cell Metab       Date:  2016-09-22       Impact factor: 27.287

Review 7.  Long non-coding RNAs: modulators of nuclear structure and function.

Authors:  Jan H Bergmann; David L Spector
Journal:  Curr Opin Cell Biol       Date:  2013-09-20       Impact factor: 8.382

Review 8.  Non-coding RNA regulation of endothelial and macrophage functions during atherosclerosis.

Authors:  Binod Aryal; Yajaira Suárez
Journal:  Vascul Pharmacol       Date:  2018-03-15       Impact factor: 5.773

9.  Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance.

Authors:  Nathan N Lee; Venkata R Chalamcharla; Francisca Reyes-Turcu; Sameet Mehta; Martin Zofall; Vanivilasini Balachandran; Jothy Dhakshnamoorthy; Nitika Taneja; Soichiro Yamanaka; Ming Zhou; Shiv I S Grewal
Journal:  Cell       Date:  2013-11-07       Impact factor: 41.582

Review 10.  Non-coding RNAs in cardiovascular diseases: diagnostic and therapeutic perspectives.

Authors:  Wolfgang Poller; Stefanie Dimmeler; Stephane Heymans; Tanja Zeller; Jan Haas; Mahir Karakas; David-Manuel Leistner; Philipp Jakob; Shinichi Nakagawa; Stefan Blankenberg; Stefan Engelhardt; Thomas Thum; Christian Weber; Benjamin Meder; Roger Hajjar; Ulf Landmesser
Journal:  Eur Heart J       Date:  2018-08-01       Impact factor: 29.983

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