Literature DB >> 26261319

Random bursts determine dynamics of active filaments.

Christoph A Weber1, Ryo Suzuki2, Volker Schaller2, Igor S Aranson3, Andreas R Bausch4, Erwin Frey5.   

Abstract

Constituents of living or synthetic active matter have access to a local energy supply that serves to keep the system out of thermal equilibrium. The statistical properties of such fluctuating active systems differ from those of their equilibrium counterparts. Using the actin filament gliding assay as a model, we studied how nonthermal distributions emerge in active matter. We found that the basic mechanism involves the interplay between local and random injection of energy, acting as an analog of a thermal heat bath, and nonequilibrium energy dissipation processes associated with sudden jump-like changes in the system's dynamic variables. We show here how such a mechanism leads to a nonthermal distribution of filament curvatures with a non-Gaussian shape. The experimental curvature statistics and filament relaxation dynamics are reproduced quantitatively by stochastic computer simulations and a simple kinetic model.

Keywords:  active filaments; gliding assay; kinetic model; molecular motors; nonthermal statistics

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Year:  2015        PMID: 26261319      PMCID: PMC4553809          DOI: 10.1073/pnas.1421322112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Straightening of Thermal Fluctuations in Semiflexible Polymers by Applied Tension.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-12-30       Impact factor: 9.161

2.  Anomalous fluctuations of active polar filaments.

Authors:  Tanniemola B Liverpool
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-03-18

3.  Self-concentration and large-scale coherence in bacterial dynamics.

Authors:  Christopher Dombrowski; Luis Cisneros; Sunita Chatkaew; Raymond E Goldstein; John O Kessler
Journal:  Phys Rev Lett       Date:  2004-08-24       Impact factor: 9.161

4.  Velocity distributions of granular gases with drag and with long-range interactions.

Authors:  K Kohlstedt; A Snezhko; M V Sapozhnikov; I S Aranson; J S Olafsen; E Ben-Naim
Journal:  Phys Rev Lett       Date:  2005-08-01       Impact factor: 9.161

5.  Concentration dependence of the collective dynamics of swimming bacteria.

Authors:  Andrey Sokolov; Igor S Aranson; John O Kessler; Raymond E Goldstein
Journal:  Phys Rev Lett       Date:  2007-04-11       Impact factor: 9.161

Review 6.  Noise in biology.

Authors:  Lev S Tsimring
Journal:  Rep Prog Phys       Date:  2014-01-20

7.  Direct observation of motion of single F-actin filaments in the presence of myosin.

Authors:  T Yanagida; M Nakase; K Nishiyama; F Oosawa
Journal:  Nature       Date:  1984 Jan 5-11       Impact factor: 49.962

8.  Myosin subfragment-1 is sufficient to move actin filaments in vitro.

Authors:  Y Y Toyoshima; S J Kron; E M McNally; K R Niebling; C Toyoshima; J A Spudich
Journal:  Nature       Date:  1987 Aug 6-12       Impact factor: 49.962

9.  Frozen steady states in active systems.

Authors:  Volker Schaller; Christoph A Weber; Benjamin Hammerich; Erwin Frey; Andreas R Bausch
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-14       Impact factor: 11.205

10.  Collective dynamics of active cytoskeletal networks.

Authors:  Simone Köhler; Volker Schaller; Andreas R Bausch
Journal:  PLoS One       Date:  2011-08-26       Impact factor: 3.240

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  7 in total

1.  Buckling instabilities and spatio-temporal dynamics of active elastic filaments.

Authors:  Yaouen Fily; Priya Subramanian; Tobias M Schneider; Raghunath Chelakkot; Arvind Gopinath
Journal:  J R Soc Interface       Date:  2020-04-22       Impact factor: 4.118

2.  Measurement of the persistence length of cytoskeletal filaments using curvature distributions.

Authors:  Pattipong Wisanpitayakorn; Keith J Mickolajczyk; William O Hancock; Luis Vidali; Erkan Tüzel
Journal:  Biophys J       Date:  2022-04-20       Impact factor: 3.699

3.  Self-organization of actin networks by a monomeric myosin.

Authors:  Dario Saczko-Brack; Ewa Warchol; Benoit Rogez; Markus Kröss; Sarah M Heissler; James R Sellers; Christopher Batters; Claudia Veigel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-12       Impact factor: 11.205

4.  Bursts of activity in collective cell migration.

Authors:  Oleksandr Chepizhko; Costanza Giampietro; Eleonora Mastrapasqua; Mehdi Nourazar; Miriam Ascagni; Michela Sugni; Umberto Fascio; Livio Leggio; Chiara Malinverno; Giorgio Scita; Stéphane Santucci; Mikko J Alava; Stefano Zapperi; Caterina A M La Porta
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-28       Impact factor: 11.205

5.  Myosin-Induced Gliding Patterns at Varied [MgATP] Unveil a Dynamic Actin Filament.

Authors:  Elina Bengtsson; Malin Persson; Mohammad A Rahman; Saroj Kumar; Hideyo Takatsuki; Alf Månsson
Journal:  Biophys J       Date:  2016-10-04       Impact factor: 4.033

6.  The flexibility and dynamics of the tubules in the endoplasmic reticulum.

Authors:  Pantelis Georgiades; Victoria J Allan; Graham D Wright; Philip G Woodman; Parinya Udommai; Manloeng A Chung; Thomas A Waigh
Journal:  Sci Rep       Date:  2017-11-28       Impact factor: 4.379

7.  Packing structure of semiflexible rings.

Authors:  Leopoldo R Gómez; Nicolás A García; Thorsten Pöschel
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-05       Impact factor: 11.205

  7 in total

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