Literature DB >> 26258431

Fast flow microfluidics and single-molecule fluorescence for the rapid characterization of α-synuclein oligomers.

Mathew H Horrocks1, Laura Tosatto1,2, Alexander J Dear1, Gonzalo A Garcia1, Marija Iljina1, Nunilo Cremades1, Mauro Dalla Serra2, Tuomas P J Knowles1, Christopher M Dobson1, David Klenerman1.   

Abstract

α-Synuclein oligomers can be toxic to cells and may be responsible for cell death in Parkinson's disease. Their typically low abundance and highly heterogeneous nature, however, make such species challenging to study using traditional biochemical techniques. By combining fast-flow microfluidics with single-molecule fluorescence, we are able to rapidly follow the process by which oligomers of αS are formed and to characterize the species themselves. We have used the technique to show that populations of oligomers with different FRET efficiencies have varying stabilities when diluted into low ionic strength solutions. Interestingly, we have found that oligomers formed early in the aggregation pathway have electrostatic repulsions that are shielded in the high ionic strength buffer and therefore dissociate when diluted into lower ionic strength solutions. This property can be used to isolate different structural groups of αS oligomers and can help to rationalize some aspects of αS amyloid fibril formation.

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Year:  2015        PMID: 26258431     DOI: 10.1021/acs.analchem.5b01811

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  35 in total

1.  Kinetic diversity of amyloid oligomers.

Authors:  Alexander J Dear; Thomas C T Michaels; Georg Meisl; David Klenerman; Si Wu; Sarah Perrett; Sara Linse; Christopher M Dobson; Tuomas P J Knowles
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-15       Impact factor: 11.205

2.  Kinetics of protein-assisted nucleic acid interconversion monitored by transient time resolved fluorescence in microfluidic droplets.

Authors:  Natalia Grytsyk; Damien Cianfarani; Olivier Crégut; Ludovic Richert; Christian Boudier; Nicolas Humbert; Pascal Didier; Yves Mély; Jérémie Léonard
Journal:  Nucleic Acids Res       Date:  2021-11-08       Impact factor: 16.971

3.  Probing TDP-43 condensation using an in silico designed aptamer.

Authors:  Elsa Zacco; Owen Kantelberg; Edoardo Milanetti; Alexandros Armaos; Francesco Paolo Panei; Jenna Gregory; Kiani Jeacock; David J Clarke; Siddharthan Chandran; Giancarlo Ruocco; Stefano Gustincich; Mathew H Horrocks; Annalisa Pastore; Gian Gaetano Tartaglia
Journal:  Nat Commun       Date:  2022-06-23       Impact factor: 17.694

Review 4.  Self-assembling peptide and protein amyloids: from structure to tailored function in nanotechnology.

Authors:  Gang Wei; Zhiqiang Su; Nicholas P Reynolds; Paolo Arosio; Ian W Hamley; Ehud Gazit; Raffaele Mezzenga
Journal:  Chem Soc Rev       Date:  2017-07-31       Impact factor: 54.564

5.  Kinetic model of the aggregation of alpha-synuclein provides insights into prion-like spreading.

Authors:  Marija Iljina; Gonzalo A Garcia; Mathew H Horrocks; Laura Tosatto; Minee L Choi; Kristina A Ganzinger; Andrey Y Abramov; Sonia Gandhi; Nicholas W Wood; Nunilo Cremades; Christopher M Dobson; Tuomas P J Knowles; David Klenerman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

Review 6.  Single-Molecular Förster Resonance Energy Transfer Measurement on Structures and Interactions of Biomolecules.

Authors:  Yi Qiao; Yuhan Luo; Naiyun Long; Yi Xing; Jing Tu
Journal:  Micromachines (Basel)       Date:  2021-04-27       Impact factor: 2.891

7.  Visualizing and trapping transient oligomers in amyloid assembly pathways.

Authors:  Emma E Cawood; Theodoros K Karamanos; Andrew J Wilson; Sheena E Radford
Journal:  Biophys Chem       Date:  2020-11-10       Impact factor: 2.352

8.  Diameter-definable tubing-microchips for applications in both continuous-flow and TEC-modulated on-chip qPCRs with reaction signal analyzed between different types of Teflon-polymers: PTFE and FEP.

Authors:  Yangyang Jiang; Guizhu Wu; Yuanming Li; Wenming Wu
Journal:  RSC Adv       Date:  2019-01-21       Impact factor: 3.361

9.  Single-Molecule Imaging of Individual Amyloid Protein Aggregates in Human Biofluids.

Authors:  Mathew H Horrocks; Steven F Lee; Sonia Gandhi; Nadia K Magdalinou; Serene W Chen; Michael J Devine; Laura Tosatto; Magnus Kjaergaard; Joseph S Beckwith; Henrik Zetterberg; Marija Iljina; Nunilo Cremades; Christopher M Dobson; Nicholas W Wood; David Klenerman
Journal:  ACS Chem Neurosci       Date:  2016-02-04       Impact factor: 4.418

10.  Quantitative analysis of co-oligomer formation by amyloid-beta peptide isoforms.

Authors:  Marija Iljina; Gonzalo A Garcia; Alexander J Dear; Jennie Flint; Priyanka Narayan; Thomas C T Michaels; Christopher M Dobson; Daan Frenkel; Tuomas P J Knowles; David Klenerman
Journal:  Sci Rep       Date:  2016-06-27       Impact factor: 4.379

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