Literature DB >> 33925350

Single-Molecular Förster Resonance Energy Transfer Measurement on Structures and Interactions of Biomolecules.

Yi Qiao1, Yuhan Luo1, Naiyun Long1, Yi Xing2, Jing Tu1.   

Abstract

Single-molecule Förster resonance energy transfer (smFRET) inherits the strategy of measurement from the effective "spectroscopic ruler" FRET and can be utilized to observe molecular behaviors with relatively high throughput at nanometer scale. The simplicity in principle and configuration of smFRET make it easy to apply and couple with other technologies to comprehensively understand single-molecule dynamics in various application scenarios. Despite its widespread application, smFRET is continuously developing and novel studies based on the advanced platforms have been done. Here, we summarize some representative examples of smFRET research of recent years to exhibit the versatility and note typical strategies to further improve the performance of smFRET measurement on different biomolecules.

Entities:  

Keywords:  FRET; biomolecule; nucleic acid structure; protein; smFRET

Year:  2021        PMID: 33925350     DOI: 10.3390/mi12050492

Source DB:  PubMed          Journal:  Micromachines (Basel)        ISSN: 2072-666X            Impact factor:   2.891


  146 in total

1.  Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase.

Authors:  Taekjip Ha; Ivan Rasnik; Wei Cheng; Hazen P Babcock; George H Gauss; Timothy M Lohman; Steven Chu
Journal:  Nature       Date:  2002-10-10       Impact factor: 49.962

2.  Monitoring the activity of single translocons.

Authors:  Intan Taufik; Alexej Kedrov; Marten Exterkate; Arnold J M Driessen
Journal:  J Mol Biol       Date:  2013-08-20       Impact factor: 5.469

3.  Nucleosome disassembly intermediates characterized by single-molecule FRET.

Authors:  Alexander Gansen; Alessandro Valeri; Florian Hauger; Suren Felekyan; Stanislav Kalinin; Katalin Tóth; Jörg Langowski; Claus A M Seidel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-21       Impact factor: 11.205

4.  In-cell single-molecule FRET measurements reveal three conformational state changes in RAF protein.

Authors:  Kenji Okamoto; Kayo Hibino; Yasushi Sako
Journal:  Biochim Biophys Acta Gen Subj       Date:  2019-05-07       Impact factor: 3.770

5.  Super-resolution Imaging of Energy Transfer by Intensity-Based STED-FRET.

Authors:  Alan M Szalai; Bruno Siarry; Jerónimo Lukin; Sebastián Giusti; Nicolás Unsain; Alfredo Cáceres; Florian Steiner; Philip Tinnefeld; Damián Refojo; Thomas M Jovin; Fernando D Stefani
Journal:  Nano Lett       Date:  2021-02-23       Impact factor: 11.189

6.  Encoding Multiple Virtual Signals in DNA Barcodes with Single-Molecule FRET.

Authors:  Sung Hyun Kim; Hyunwoo Kim; Hawoong Jeong; Tae-Young Yoon
Journal:  Nano Lett       Date:  2021-02-15       Impact factor: 11.189

Review 7.  Nucleosome mobility and the regulation of gene expression: Insights from single-molecule studies.

Authors:  Sergei Rudnizky; Omri Malik; Adaiah Bavly; Lilach Pnueli; Philippa Melamed; Ariel Kaplan
Journal:  Protein Sci       Date:  2017-04-02       Impact factor: 6.725

8.  Three-Color Single-Molecule FRET and Fluorescence Lifetime Analysis of Fast Protein Folding.

Authors:  Janghyun Yoo; John M Louis; Irina V Gopich; Hoi Sung Chung
Journal:  J Phys Chem B       Date:  2018-10-10       Impact factor: 2.991

9.  Single-Molecule Imaging Reveals Conformational Manipulation of Holliday Junction DNA by the Junction Processing Protein RuvA.

Authors:  Dalton R Gibbs; Soma Dhakal
Journal:  Biochemistry       Date:  2018-05-24       Impact factor: 3.162

Review 10.  A Guide to Fluorescent Protein FRET Pairs.

Authors:  Bryce T Bajar; Emily S Wang; Shu Zhang; Michael Z Lin; Jun Chu
Journal:  Sensors (Basel)       Date:  2016-09-14       Impact factor: 3.576

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