Literature DB >> 26233165

Spontaneous emergence of autocatalytic information-coding polymers.

Alexei V Tkachenko1, Sergei Maslov2.   

Abstract

Self-replicating systems based on information-coding polymers are of crucial importance in biology. They also recently emerged as a paradigm in material design on nano- and micro-scales. We present a general theoretical and numerical analysis of the problem of spontaneous emergence of autocatalysis for heteropolymers capable of template-assisted ligation driven by cyclic changes in the environment. Our central result is the existence of the first order transition between the regime dominated by free monomers and that with a self-sustaining population of sufficiently long chains. We provide a simple, mathematically tractable model supported by numerical simulations, which predicts the distribution of chain lengths and the onset of autocatalysis in terms of the overall monomer concentration and two fundamental rate constants. Another key result of our study is the emergence of the kinetically limited optimal overlap length between a template and each of its two substrates. The template-assisted ligation allows for heritable transmission of the information encoded in chain sequences thus opening up the possibility of long-term memory and evolvability in such systems.

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Year:  2015        PMID: 26233165     DOI: 10.1063/1.4922545

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  8 in total

1.  Catalytic diversity in self-propagating peptide assemblies.

Authors:  Tolulope O Omosun; Ming-Chien Hsieh; W Seth Childers; Dibyendu Das; Anil K Mehta; Neil R Anthony; Ting Pan; Martha A Grover; Keith M Berland; David G Lynn
Journal:  Nat Chem       Date:  2017-02-27       Impact factor: 24.427

2.  Spontaneous emergence of catalytic cycles with colloidal spheres.

Authors:  Zorana Zeravcic; Michael P Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-10       Impact factor: 11.205

3.  The Role of Templating in the Emergence of RNA from the Prebiotic Chemical Mixture.

Authors:  Andrew S Tupper; Kevin Shi; Paul G Higgs
Journal:  Life (Basel)       Date:  2017-10-31

4.  Selection of self-priming molecular replicators.

Authors:  Daechan Park; Andrew D Ellington; Cheulhee Jung
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

5.  Survival of Self-Replicating Molecules under Transient Compartmentalization with Natural Selection.

Authors:  Gabin Laurent; Luca Peliti; David Lacoste
Journal:  Life (Basel)       Date:  2019-10-03

6.  Structured sequences emerge from random pool when replicated by templated ligation.

Authors:  Patrick W Kudella; Alexei V Tkachenko; Annalena Salditt; Sergei Maslov; Dieter Braun
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-23       Impact factor: 11.205

7.  Driving forces in the origins of life.

Authors:  K A Dill; L Agozzino
Journal:  Open Biol       Date:  2021-02-03       Impact factor: 6.411

8.  Thermodynamic and Kinetic Sequence Selection in Enzyme-Free Polymer Self-Assembly inside a Non-equilibrium RNA Reactor.

Authors:  Tobias Göppel; Joachim H Rosenberger; Bernhard Altaner; Ulrich Gerland
Journal:  Life (Basel)       Date:  2022-04-10
  8 in total

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