| Literature DB >> 26230699 |
Jacob Lum1, Ronghui Wang2, Billy Hargis3, Steve Tung4, Walter Bottje5, Huaguang Lu6, Yanbin Li7,8.
Abstract
In this research a DNA aptamer, which was selected through SELEX (systematic evolution of ligands by exponential enrichment) to be specific against the H5N1 subtype of the avian influenza virus (AIV), was used as an alternative reagent to monoclonal antibodies in an impedance biosensor utilizing a microfluidics flow cell and an interdigitated microelectrode for the specific detection of H5N1 AIV. The gold surface of the interdigitated microelectrode embedded in a microfluidics flow cell was modified using streptavidin. The biotinylated aptamer against H5N1 was then immobilized on the electrode surface using biotin-streptavidin binding. The target virus was captured on the microelectrode surface, causing an increase in impedance magnitude. The aptasensor had a detection time of 30 min with a detection limit of 0.0128 hemagglutinin units (HAU). Scanning electron microscopy confirmed the binding of the target virus onto the electrode surface. The DNA aptamer was specific to H5N1 and had no cross-reaction to other subtypes of AIV (e.g., H1N1, H2N2, H7N2). The newly developed aptasensor offers a portable, rapid, low-cost alternative to current methods with the same sensitivity and specificity.Entities:
Keywords: aptamer; avian influenza virus; impedance aptasensor; microfluidic chip; virus detection
Mesh:
Substances:
Year: 2015 PMID: 26230699 PMCID: PMC4570336 DOI: 10.3390/s150818565
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1(a) Typical impedance magnitude data for the detections of H5N1 AIV; (b) Typical phase angle data for the detection of H5N1 AIV. Data labels for dashed lines correspond to serial dilution values (101 to 105 dilutions) of 128 HAU virus sample (12.8 to 0.00128 HAU). The amplitude of voltage was 100 mV.
Figure 2(a) The equivalent circuit used for data analysis. The equivalent circuit components were resistance of the solution (Rs), resistance of PDMS (Rpdms), double layer capacitance (Cdl), and geometrical capacitance (Cg); (b) The bode diagram of measured impedance data and simulated impedance data generated by curve fitting of the equivalent circuit. The diagram data was measured by testing a H5N1 virus with a concentration of 12.8 HAU.
Contributions of the elements in the equivalent circuit to the impedance magnitude. Impedance magnitude values were calculated using simulated data from fitting the equivalent circuit to measured data gathered in the detection of 12.8 HAU for H5N1 AIV.
| Bare electrode | 187.3 | 0.271 | 1.269 | 0.052 |
| Streptavidin | 1.4 | 0.250 | 1.462 | 0.089 |
| Aptamer | 9.4 | 0.282 | 1.486 | 0.074 |
| Virus | 64.1 | 0.388 | 0.870 | 0.066 |
| % of change between aptamer and virus | 582 | 37.6 | −41.5 | −10.3 |
| <0.01 | 0.20 | 0.02 | 0.32 |
Figure 3(a) Average impedance change caused by different concentrations of AIV H5N1. The values of the horizontal axis correspond to serial dilution values of 128 HAU virus sample (12.8–0.00128 HAU). Error bars are based on the standard deviation of triplicate tests. The impedance was measured at the frequency of 25.8 kHz; (b) ESEM micrographs of the electrode surface with immobilized aptamers (I) before and (II,III) after AIV capture.
Figure 4Specificity study of the developed impedance aptasensor. AIVs were tested at a concentration of 12.8 HAU. Error bars were based on the standard deviation of triplicate tests. The impedance was measured at the frequency of 25.8 kHz.