Literature DB >> 26224303

Fluorescence spectroscopic analysis of the structure and dynamics of Bacillus subtilis lipase A governing its activity profile under alkaline conditions.

Daniel Kübler1, Kim N Ingenbosch1, Anna Bergmann1, Monika Weidmann1, Kerstin Hoffmann-Jacobsen2.   

Abstract

Because of their vast diversity of substrate specificity and reaction conditions, lipases are versatile materials for biocatalysis. Lipase A from Bacillus subtilis (BSLA) is the smallest lipase yet discovered. It has the typical α/β hydrolase fold but lacks a lid covering the substrate cleft. In this study, the pH-dependence of the activity, stability, structure, and dynamics of BSLA was investigated by fluorescence spectroscopy. By use of a fluorogenic substrate it was revealed that the optimum pH for BSLA activity is 8.5 whereas thermodynamic and kinetic stability are maximum at pH 10. The origin of this behavior was clarified by investigation of ANS (8-anilino-1-naphthalenesulfonic acid) binding and fluorescence quenching of the two single tryptophan mutants W31F and W42F. Variations in segmental dynamics were investigated by use of time-resolved fluorescence anisotropy. This analysis showed that the activity maximum is governed by high surface hydrophobicity and high segmental mobility of surface loops whereas the stability optimum is a result of low segmental mobility and surface hydrophobicity.

Entities:  

Keywords:  Activity; Bacillus subtilis; Fluorescence anisotropy; Fluorescence spectroscopy; Lipase; pH

Mesh:

Substances:

Year:  2015        PMID: 26224303     DOI: 10.1007/s00249-015-1061-6

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  31 in total

1.  How do lipases and esterases work: the electrostatic contribution.

Authors:  M T Neves Petersen; P Fojan; S B Petersen
Journal:  J Biotechnol       Date:  2001-02-13       Impact factor: 3.307

2.  Novel buffer systems for macromolecular crystallization.

Authors:  Janet Newman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-02-25

3.  HotPatch: a statistical approach to finding biologically relevant features on protein surfaces.

Authors:  Frank K Pettit; Emiko Bare; Albert Tsai; James U Bowie
Journal:  J Mol Biol       Date:  2007-03-21       Impact factor: 5.469

4.  Characterization of the dynamics of an essential helix in the U1A protein by time-resolved fluorescence measurements.

Authors:  Divina Anunciado; Michael Agumeh; Bethany L Kormos; David L Beveridge; Joseph L Knee; Anne M Baranger
Journal:  J Phys Chem B       Date:  2008-02-23       Impact factor: 2.991

Review 5.  Fluorogenic and chromogenic substrates used in bacterial diagnostics.

Authors:  M Manafi; W Kneifel; S Bascomb
Journal:  Microbiol Rev       Date:  1991-09

6.  A theory of fluorescence polarization decay in membranes.

Authors:  K Kinosita; S Kawato; A Ikegami
Journal:  Biophys J       Date:  1977-12       Impact factor: 4.033

7.  Structure and dynamics of the alpha-lactalbumin molten globule: fluorescence studies using proteins containing a single tryptophan residue.

Authors:  S Chakraborty; V Ittah; P Bai; L Luo; E Haas; Z Peng
Journal:  Biochemistry       Date:  2001-06-19       Impact factor: 3.162

8.  Dimer formation from 1-amino-8-naphthalenesulfonate catalyzed by bovine serum albumin. A new fluorescent molecule with exceptional binding properties.

Authors:  C G Rosen; G Weber
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

Review 9.  Time-resolved fluorescence of proteins.

Authors:  J M Beechem; L Brand
Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

10.  The crystal structure of Bacillus subtilis lipase: a minimal alpha/beta hydrolase fold enzyme.

Authors:  G van Pouderoyen; T Eggert; K E Jaeger; B W Dijkstra
Journal:  J Mol Biol       Date:  2001-05-25       Impact factor: 5.469

View more
  2 in total

1.  Inhibitor Mimetic Mutations in the Pseudomonas aeruginosa PqsE Enzyme Reveal a Protein-Protein Interaction with the Quorum-Sensing Receptor RhlR That Is Vital for Virulence Factor Production.

Authors:  Isabelle R Taylor; Jon E Paczkowski; Philip D Jeffrey; Brad R Henke; Chari D Smith; Bonnie L Bassler
Journal:  ACS Chem Biol       Date:  2021-04-01       Impact factor: 5.100

2.  Deletion and Randomization of Structurally Variable Regions in B. subtilis Lipase A (BSLA) Alter Its Stability and Hydrolytic Performance Against Long Chain Fatty Acid Esters.

Authors:  Ronny Martínez; Claudia Bernal; Rodrigo Álvarez; Christopher Concha; Fernando Araya; Ricardo Cabrera; Gaurao V Dhoke; Mehdi D Davari
Journal:  Int J Mol Sci       Date:  2020-03-14       Impact factor: 5.923

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.