Literature DB >> 26203194

Structural Aspects of N-Glycosylations and the C-terminal Region in Human Glypican-1.

Wael Awad1, Barbara Adamczyk2, Jessica Örnros2, Niclas G Karlsson2, Katrin Mani3, Derek T Logan4.   

Abstract

Glypicans are multifunctional cell surface proteoglycans involved in several important cellular signaling pathways. Glypican-1 (Gpc1) is the predominant heparan sulfate proteoglycan in the developing and adult human brain. The two N-linked glycans and the C-terminal domain that attach the core protein to the cell membrane are not resolved in the Gpc1 crystal structure. Therefore, we have studied Gpc1 using crystallography, small angle x-ray scattering, and chromatographic approaches to elucidate the composition, structure, and function of the N-glycans and the C terminus and also the topology of Gpc1 with respect to the membrane. The C terminus is shown to be highly flexible in solution, but it orients the core protein transverse to the membrane, directing a surface evolutionarily conserved in Gpc1 orthologs toward the membrane, where it may interact with signaling molecules and/or membrane receptors on the cell surface, or even the enzymes involved in heparan sulfate substitution in the Golgi apparatus. Furthermore, the N-glycans are shown to extend the protein stability and lifetime by protection against proteolysis and aggregation.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  N-linked glycosylation; glypican-1; glypicans; mass spectrometry (MS); membrane-anchored protein; proteoglycan; small angle x-ray scattering (SAXS); structure-function

Mesh:

Substances:

Year:  2015        PMID: 26203194      PMCID: PMC4645609          DOI: 10.1074/jbc.M115.660878

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  62 in total

1.  Cascaded multiple classifiers for secondary structure prediction.

Authors:  M Ouali; R D King
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

2.  In-gel digestion for mass spectrometric characterization of proteins and proteomes.

Authors:  Andrej Shevchenko; Henrik Tomas; Jan Havlis; Jesper V Olsen; Matthias Mann
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

3.  Structural characterization of flexible proteins using small-angle X-ray scattering.

Authors:  Pau Bernadó; Efstratios Mylonas; Maxim V Petoukhov; Martin Blackledge; Dmitri I Svergun
Journal:  J Am Chem Soc       Date:  2007-04-06       Impact factor: 15.419

4.  Rapid analysis of cell surface N-glycosylation from living cells using mass spectrometry.

Authors:  Houda Hamouda; Matthias Kaup; Mujib Ullah; Markus Berger; Volker Sandig; Rudolf Tauber; Véronique Blanchard
Journal:  J Proteome Res       Date:  2014-11-13       Impact factor: 4.466

Review 5.  Glypican-1 facilitates prion conversion in lipid rafts.

Authors:  Nigel M Hooper
Journal:  J Neurochem       Date:  2011-03       Impact factor: 5.372

6.  Cysteine-rich domains related to Frizzled receptors and Hedgehog-interacting proteins.

Authors:  Jimin Pei; Nick V Grishin
Journal:  Protein Sci       Date:  2012-07-06       Impact factor: 6.725

7.  Detailed structural analysis of N-glycans released from glycoproteins in SDS-PAGE gel bands using HPLC combined with exoglycosidase array digestions.

Authors:  Louise Royle; Catherine M Radcliffe; Raymond A Dwek; Pauline M Rudd
Journal:  Methods Mol Biol       Date:  2006

8.  FoXS: a web server for rapid computation and fitting of SAXS profiles.

Authors:  Dina Schneidman-Duhovny; Michal Hammel; Andrej Sali
Journal:  Nucleic Acids Res       Date:  2010-05-27       Impact factor: 16.971

9.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  Protein disorder prediction: implications for structural proteomics.

Authors:  Rune Linding; Lars Juhl Jensen; Francesca Diella; Peer Bork; Toby J Gibson; Robert B Russell
Journal:  Structure       Date:  2003-11       Impact factor: 5.006

View more
  9 in total

1.  A Frizzled-Like Cysteine-Rich Domain in Glypican-3 Mediates Wnt Binding and Regulates Hepatocellular Carcinoma Tumor Growth in Mice.

Authors:  Na Li; Liwen Wei; Xiaoyu Liu; Hongjun Bai; Yvonne Ye; Dan Li; Nan Li; Ulrich Baxa; Qun Wang; Ling Lv; Yun Chen; Mingqian Feng; Byungkook Lee; Wei Gao; Mitchell Ho
Journal:  Hepatology       Date:  2019-05-24       Impact factor: 17.425

2.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

Review 3.  Generation of extracellular morphogen gradients: the case for diffusion.

Authors:  Kristina S Stapornwongkul; Jean-Paul Vincent
Journal:  Nat Rev Genet       Date:  2021-03-25       Impact factor: 53.242

4.  Extracellular Vesicles and Glycosylation.

Authors:  Yoichiro Harada; Yuki Ohkawa; Kento Maeda; Yasuhiko Kizuka; Naoyuki Taniguchi
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 3.650

Review 5.  Role of exosomes in pancreatic cancer.

Authors:  Hao Liu; Shishi Qiao; Xiaoyue Fan; Yufei Gu; Yingxuan Zhang; Shuai Huang
Journal:  Oncol Lett       Date:  2021-02-17       Impact factor: 2.967

6.  Glypicans shield the Wnt lipid moiety to enable signalling at a distance.

Authors:  Ian J McGough; Luca Vecchia; Benjamin Bishop; Tomas Malinauskas; Karen Beckett; Dhira Joshi; Nicola O'Reilly; Christian Siebold; E Yvonne Jones; Jean-Paul Vincent
Journal:  Nature       Date:  2020-07-22       Impact factor: 49.962

7.  32A9, a novel human antibody for designing an immunotoxin and CAR-T cells against glypican-3 in hepatocellular carcinoma.

Authors:  Xiaoyu Liu; Fang Gao; Longwei Jiang; Meng Jia; Lei Ao; Ming Lu; Liming Gou; Mitchell Ho; Shaochang Jia; Fei Chen; Wei Gao
Journal:  J Transl Med       Date:  2020-08-03       Impact factor: 5.531

8.  The Glypican-1/HGF/C-Met and Glypican-1/VEGF/VEGFR2 Ternary Complexes Regulate Hair Follicle Angiogenesis.

Authors:  Charlie Colin-Pierre; Nicolas Berthélémy; Nicolas Belloy; Louis Danoux; Vincent Bardey; Romain Rivet; Solène Mine; Christine Jeanmaire; François-Xavier Maquart; Laurent Ramont; Stéphane Brézillon
Journal:  Front Cell Dev Biol       Date:  2021-12-08

9.  Structure, Dynamics, and Interactions of GPI-Anchored Human Glypican-1 with Heparan Sulfates in a Membrane.

Authors:  Chuqiao Dong; Yeol Kyo Choi; Jumin Lee; X Frank Zhang; Aurelia Honerkamp-Smith; Göran Widmalm; Linda J Lowe-Krentz; Wonpil Im
Journal:  Glycobiology       Date:  2021-06-03       Impact factor: 4.313

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.