| Literature DB >> 26186918 |
Gifone A Rocha1, Andreia M C Rocha2, Adriana D Gomes3, César Ll Faria4, Fabrício F Melo5, Sérgio A Batista6, Viviane C Fernandes7, Nathálie B F Almeida8, Kádima N Teixeira9, Kátia S Brito10, Dulciene Maria Magalhães Queiroz11.
Abstract
BACKGROUND: Because to date there is no available study on STAT3 polymorphism and gastric cancer in Western populations and taking into account that Helicobacter pylori CagA EPIYA-C segment deregulates SHP-2/ERK-JAK/STAT3 pathways, we evaluated whether the two variables are independently associated with gastric cancer.Entities:
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Year: 2015 PMID: 26186918 PMCID: PMC4506573 DOI: 10.1186/s12885-015-1533-1
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Primer pairs and conditions used in the PCR to detect H. pylori genes (ureA, cagA and 3’ variable region of the cagA gene that contains EPIYA sequences) and in qRT-PCR to genotype STAT3 rs744166 and to evaluate STAT3 mRNA expression
| Gene | Primers (5’ – 3’) | PCR conditions | PCR Product (bp) | Reference |
|---|---|---|---|---|
|
| F: GCCAATGGTAAATTAGTT | 95 °C - 5 min.; 34 cycles (94 °C 1 min., 45 °C - 1 min. and 72 °C - 1 min.) and 72 °C - 5 min. | 411 | 34 |
| R: CTCCTTAATTGTTTTTAC | ||||
| F:CTGCAAAAGATTGTTTGCGAGA | 95 °C - 5 min, 34 cycles (95 °C 1 min, 50 °C-1 min and 72 °C-1 min) and 72 °C - 15 min | 400 | 35 | |
| R:AGACGGTTTGTTAGAAAACGTC | ||||
| F:GATAACAGGCAAGCTTTTGAGG | 95 °C - 5 min, 38 cycles (94 °C 1 min, 55 °C - 1 min and 72 °C - 2 min.) and 72 °C - 7 min. | 349 | 36 | |
| R:CTGCAAAAGATTGTTTGCGAGA | ||||
| F: ACCCTAGTCGGTAATGGGTTA | 95 °C - 5 min, 35 cycles (95 °C 1 min, 50 °C-1 min and 72 °C-1 min.) and 72 °C - 7 min | 500 - 850 | 37 | |
| R: GTAATTGTCTAGTTTCGC | ||||
| CTGTTTGTTCTATAAATTACTGTCA[A/G]GCTCGATTCCCTCAAGACATTACAG | 60 °C - 1 min., 95 °C - 10 min., 50 cycles (95 °C - 15 s., 50 °C - 90 s.) and 60 °C - 1 min. | 70 |
Bp, base pairs; a, Applied Biosystem, HS00374280-m1
Distribution of the STAT3 rs744166 genotypes according to the gender, mean age, H. pylori status and CagA status in blood donors (n = 541)
| Gender | ||||||
|---|---|---|---|---|---|---|
| Female | Male | AA | AG | GG | Total | |
| n (%) | n (%) | n (%) | n (%) | n (%) | n (%) | |
| Female | 132 (24.4) | - | 39 (29.5) | 63 (47.8) | 30 (22.7) | 132 (100) |
| Male | - | 409 (75.6) | 142 (34.7) | 187 (45.7) | 80 (19.6) | 409 (100) |
| total | - | - | 181 (33.5) | 250 (46.2) | 110 (20.3) | 541 (100) |
| Mean age in yrs (SD) | 33.6 (9.9) | 33.8 (9.6) | 34.6 (10.3) | 33.6 (9.8) | 32.9 (9.8) | 33.8 (10.0) |
| Range yrs | 18 - 59 | 18 - 65 | 18 - 65 | 18 - 64 | 19 - 59 | 18 - 65 |
| Hp | 53 (40.2) | 118 (28.9) | 53 (29.3) | 81 (47.4) | 37 (21.6) | 171 (31.6) |
| Hp | 79 (59.8) | 291 (71.1) | 128 (34.6) | 169 (45.7) | 73 (19.7) | 370 (68.4) |
| CagA | 34 (43.0) | 126 (43.3) | 51 (31.9) | 77 (48.1) | 32 (20.0) | 160 (43.3) |
| CagA | 45 (57.0) | 165 (56.7) | 73 (34.8) | 95 (45.2) | 42 (20.0) | 210 (56.7) |
n, number; SD, standard deviation; yrs, years; Hp, Helicobacter pylori; -ve, negative; +ve, positive
Distribution of the STAT3 rs744166 genotypes according to the gender, mean age, CagA status and EPIYA-C patterns in patients with gastritis and gastric cancer
| Disease | ||||
|---|---|---|---|---|
| AA | AG | GG | Total | |
| n (%) | n (%) | n (%) | n (%) | |
| Gastritis ( | ||||
| Female | 61 (33.7) | 78 (43.1) | 42 (23.2) | 181 (65.8) |
| Male | 27 (28.7) | 36 (38.3) | 31 (33.0) | 94 (34.2) |
| Mean age in yrs (SD) | 49.6 (17.1) | 53.9 (18.6) | 58.6 (15.3) | 53.8 (17.6) |
| | 26 (25.7) | 49 (48.5) | 26 (25.7) | 101 (36.7) |
| | 62 (35.6) | 65 (37.4) | 47 (27.0) | 174 (62.3) |
| EPIYA-AB | 1 (25.5) | 1 (25.5) | 2 (50.0) | 4 (2.3) |
| EPIYA-ABC | 44(32.1) | 53 (38.7) | 40 (29.2) | 137 (78.7) |
| EPIYA-ABCC | 15 (53.6) | 8 (28.6) | 5 (17.8) | 28 (16.1) |
| EPIYA-ABCCC | 2 (40.0) | 3 (60.0) | 0 | 5 (2.9) |
| Gastric cancer ( | ||||
| Female | 19 (21.8) | 41 (47.1) | 27 (31.0) | 87 (37.5) |
| Male | 40 (27.6) | 61 (42.1) | 44 (30.3) | 145 (62.5) |
| Mean age in yrs (SD) | 63.4 (13.3) | 61.5 (12.9) | 61.7 (13.6) | 62.0 (13.2) |
| | 2 (10.5) | 11 (57.9) | 6 (31.6) | 19 (8.2) |
| | 57 (26.8) | 91 (42.7) | 65 (30.5) | 213 (91.8) |
| EPIYA- AB | 0 | 2 (66.7) | 1 (33.3) | 3 (1.4) |
| EPIYA-ABC | 28 (23.1) | 53 (43.8) | 40 (33.1) | 121 (56.8) |
| EPIYA-ABCC | 22 (30.1) | 30 (41.1) | 21 (28.8) | 73 (34.3) |
| EPIYA-ABCCC | 7 (43.8) | 6 (37.5) | 3 (18.7) | 16 (7.5) |
n, number; SD, standard deviation; yrs, years. -ve, negative; +ve, positive
Distribution of the EPIYA-C patterns according to the gender and mean age, in patients with gastritis and gastric cancer
| Disease | EPIYA pattern | |||
|---|---|---|---|---|
| AB | ABC | ABCC | ABCCC | |
| n (%) | n (%) | n (%) | n (%) | |
| Gastritis ( | ||||
| Female | 2 (1.7) | 93 (80.2) | 18 (18.1) | 3 (2.6) |
| Male | 2 (3.4) | 44 (75.9) | 10 (19.5) | 2 (3.5) |
| Mean age in yrs (SD) | 44.3 (25.0) | 54.7(16.9) | 50.6 (15.1) | 52.0 (11.0) |
| Range | 27 - 73 | 18 - 86 | 27 - 73 | 39 - 63 |
| Cancer ( | ||||
| Female | 1 (1.2) | 47 (56.7) | 29 (42.1) | 6 (7.2) |
| Male | 2 (1.5) | 74 (56.9) | 44 (41.6) | 10 (7.7) |
| Mean age in yrs (SD) | 56.5 (3.5) | 60.2 (14.4) | 64.4 (13.2) | 70.0 (9.7) |
| Range | 54 - 59 | 28 - 89 | 33 - 92 | 55 - 85 |
n, number; SD, standard deviation; yrs, years
Host and bacterium variables associated with gastric cancer (n = 232) in comparison with H. pylori-positive blood donors (n = 370)
| Covariate | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|
|
| OR | 95 % CI |
| |
| Age | < 0.001 | 1.20 | 1.16 - 1.23 | < 0.001 |
| Gender | < 0.001 | 2.99 | 1.48 - 6 | 0.002 |
| rs744166 | 0.002 | 1.76 | 1.14 - 2.70 | 0.01 |
| CagA | < 0.001 | 12.80 | 5.48 - 29.86 | < 0.001 |
The Hosmer-Lemeshow test showed good fit (10 steps; 8 degrees of freedom; p = 0.20). rs744166 genotype was treated as categorical variables having 3 values with 0 meaning the AA genotype, 1 the carrier of one G allele and 2 the GG genotype, +ve, positive
Host and bacterium variables associated with gastric cancer (n = 213) in comparison with gastritis (n = 174) in patients infected by H. pylori cagA-positive strains
| Covariates | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|
|
| OR | 95 % CI |
| |
| First modela | ||||
| Age | < 0.001 | 1.04 | 1.02 - 1.05 | < 0.001 |
| Gender | < 0.001 | 3.58 | 2.10 - 6.09 | < 0.001 |
| rs744166 | 0.007 | 1.64 | 1.16 - 2.31 | 0.005 |
| EPIYA-C number | < 0.001 | 2.28 | 1.41 - 3.68 | 0.001 |
| Second modelb | ||||
| Age | < 0.001 | 1.05 | 1.05 - 1.06 | < 0.001 |
| Gender | < 0.001 | 3.23 | 2.02 - 5.17 | < 0.001 |
| rs744166 plus EPIYA-C number | < 0.001 | 3.01 | 2.29 - 3.97 | < 0.001 |
The Hosmer-Lemeshow tests showed good fit for models a(10 steps, 8 degrees of freedom; p = 0.42) b(10 steps, 8 degrees of freedom; p = 0.25), OR, odds ratio; 95 % CI: confidence interval. We constructed two models studying the loci, according to the amount of G rs744166 allele, treated as categorical variables having 3 values with 0 meaning the AA genotype, 1 the carrier of one G allele and 2 the GG genotype. In the second model the variable was obtained by the sum of the amount of STAT3 G allele and the number of EPIYA-C segments
Fig. 1Box plots representing mRNA STAT3 expression of five independent measurements, performed in triplicate. The upper and lower limits of the boxes represent the 75th and 25th percentiles, respectively; the horizontal bar across the box indicates the median and the end of the vertical lines indicate the minimum and maximum data values. Quantitative real-time PCR was used to analyze the influence of STAT3 rs744166 genotypes on the STAT3 mRNA expression before and after LPS or Pam3Cys stimulation. Gene expression was normalized to the expression of a reference gene, glyceraldehyde 3-phosphate dehydrogenase (GAPDH). PBMCs of healthy H. pylori-negative subjects, as determined by 13C-urea breath test, carrying rs744166 GG (n = 3), AG (n = 3) or AA genotypes (n = 3) were stimulated with 100 μg/mL LPS or 100 μg/mL Pam3Cys for 6 h. RNA was purified and STAT3 mRNA expression analyzed by qRT-PCR. A cDNA synthesis reaction including all components except the reverse transcriptase was subsequently used as control for quantitative real time PCR (qRT-PCR). Distilled water was also used as a negative control
Fig. 2Representative immunohistochemical staining showing nuclear localization of p-STAT3 in the antral glandular cells and stroma cells under low-power (100x) and high-power (400x) magnification of carriers of AA and GG STAT3 rs744166 genotypes: a and b, mock; c and d, medium brown-colored nuclei in the gastric stroma cells and glandular cells of a carrier of AA genotype and e and f, densely stained nuclei of 100 % of cells, both of the gastric stroma (arrow head) and glands (arrow) in a carrier of GG genotype. The percentage of positive cells for STAT3 was classified as 0 (none), 1 (≤ 50 %), 2 (50 to 90 %), and 3 (> 90 %) and staining intensity was graded in three step scale, as follows: 1 (low), 2 (medium) and 3 (high) intensity
Fig. 3Box plots representing scores of nuclear p-STAT3 expression in the antral glandular cells and stroma cells of patients with gastritis according to the different STAT3 rs744166 gentotypes. The upper and lower limits of the boxes represent the 75th and 25th percentiles, respectively; the horizontal bar across the box indicates the median and the end of the vertical lines indicate the minimum and maximum data values