| Literature DB >> 26176541 |
Yue-Yue Zhou1, Xiong-Fei Ji1, Jian-Ping Fu1, Xiao-Juan Zhu1, Rong-Hua Li1, Chang-Kao Mu1, Chun-Lin Wang1, Wei-Wei Song1.
Abstract
D-galactose injection has been shown to induce many changes in mice that represent accelerated aging. This mouse model has been widely used for pharmacological studies of anti-aging agents. The underlying mechanism of D-galactose induced aging remains unclear, however, it appears to relate to glucose and 1ipid metabolic disorders. Currently, there has yet to be a study that focuses on investigating gene expression changes in D-galactose aging mice. In this study, integrated analysis of gas chromatography/mass spectrometry-based metabonomics and gene expression profiles was used to investigate the changes in transcriptional and metabolic profiles in mimetic aging mice injected with D-galactose. Our findings demonstrated that 48 mRNAs were differentially expressed between control and D-galactose mice, and 51 potential biomarkers were identified at the metabolic level. The effects of D-galactose on aging could be attributed to glucose and 1ipid metabolic disorders, oxidative damage, accumulation of advanced glycation end products (AGEs), reduction in abnormal substance elimination, cell apoptosis, and insulin resistance.Entities:
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Year: 2015 PMID: 26176541 PMCID: PMC4503422 DOI: 10.1371/journal.pone.0132088
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Multivariate statistical analysis of liver GC/MS data.
A)Score plot of PCA obtained from control group(●) and D-galactose group(). B)Score plot of PLS-DA obtained from control group(●) and D-galactose group(). C) The result of permutation test, R2 (gray circle),Q2 (black square). D) Score plot of OPLS model obtained from control group(●) and D-galactose group()
Identification results of potential biomarkers detected by GC/MS in liver of D-galactose group.
Metabolites which VIP>1 and p-value <0.05 have been showed in Table 1. If the value of log2 FOLD CHANGE is positive, the contect of that metabolite in D-galactose is greater than control group, If the value of log2 FOLD CHANGE is negative, the contect of that metabolite in D-galactose is less than control group.
| Metabolite | RetentionTime | m/z | VIP | p-value | Fold change | log2 fold change |
|---|---|---|---|---|---|---|
| Fructose 1 | 17.4631 | 307 | 1.98432 | 0.03276 | 3.156158 | 1.658169 |
| Sophorose 2 | 25.2294 | 319 | 4.33718 | 0.003095 | 7534780 | 22.84513 |
| Palmitoleic acid | 19.026 | 311 | 3.62036 | 0.033467 | 0.287164 | -1.80005 |
| Isoleucine | 9.00167 | 86 | 2.15906 | 0.04119 | 3.560789 | 1.832197 |
| Lactic acid | 7.26854 | 219 | 4.25708 | 4.18E-06 | 8.537517 | 3.093817 |
| Arachidonic acid | 22.1227 | 108 | 2.10906 | 0.002832 | 3.083468 | 1.624554 |
| Xanthine | 18.9413 | 243 | 1.38454 | 0.019336 | 0.599061 | -0.73923 |
| D-Talose 2 | 17.9603 | 211 | 1.62746 | 0.04413 | 0.408442 | -1.2918 |
| Sorbitol | 18.1324 | 244 | 2.43229 | 0.002016 | 220.8209 | 7.786733 |
| Glutamine 3 | 13.7833 | 155 | 3.87248 | 0.029609 | 0.437491 | -1.19267 |
| Oxoproline | 13.6611 | 336 | 1.59867 | 0.016554 | 2.356776 | 1.236814 |
| Phosphate | 10.3103 | 158 | 5.66992 | 1.05E-11 | 4.86E+08 | 28.85675 |
| Xylose 1 | 15.1943 | 103 | 4.05294 | 4.17E-07 | 17.33121 | 4.1153 |
| Fucose 1 | 15.946 | 160 | 1.96502 | 0.019886 | 5.896048 | 2.559748 |
| Xylose 2 | 15.0501 | 217 | 1.91482 | 0.002226 | 3.49752 | 1.806332 |
| Cellobiose 1 | 24.4233 | 361 | 1.46246 | 0.0069 | 14.94889 | 3.901967 |
| Erythrose 2 | 12.49 | 201 | 2.86674 | 0.015468 | 1856007 | 20.82377 |
| Fructose-6-phosphate | 21.3829 | 156 | 2.37331 | 0.011185 | 0.126768 | -2.97974 |
| 1,5-Anhydroglucitol | 17.1617 | 217 | 2.07223 | 0.02223 | 0.170882 | -2.54893 |
| D-galacturonic acid 2 | 18.2821 | 299 | 1.32656 | 0.006003 | 1.985 | 0.989139 |
| Oxamic acid | 10.2096 | 171 | 3.98259 | 0.000112 | 3.616163 | 1.85446 |
| Inosine | 23.6621 | 93 | 3.16985 | 0.010008 | 7748968 | 22.88557 |
| Cholesterol | 27.9683 | 211 | 3.19993 | 0.001297 | 9.494937 | 3.247158 |
| Uric acid | 19.6589 | 398 | 2.00843 | 0.004495 | 0.223693 | -2.16041 |
| D-erythro-sphingosine 1 | 22.7864 | 387 | 3.25372 | 1.44E-05 | 525083.8 | 19.00219 |
| Adenosine-5-monophosphate | 27.0061 | 257 | 2.18523 | 0.004598 | 0.224391 | -2.15591 |
| 1-Methyladenosine 2 | 22.0599 | 361 | 1.15883 | 0.028768 | 0.019626 | -5.67107 |
| Allantoic acid 2 | 17.5249 | 156 | 2.17308 | 0.011752 | 4E-07 | -21.2539 |
| Uridine 2 | 22.6408 | 173 | 2.60916 | 0.002197 | 2.43E-06 | -18.6519 |
| Oxalic acid | 8.02167 | 114 | 2.41541 | 0.001542 | 10.88661 | 3.444483 |
| Glucose-1-phosphate | 16.4466 | 292 | 2.08992 | 0.005905 | 8.182085 | 3.032468 |
| 2-Deoxy-D-galactose 1 | 16.5897 | 217 | 1.31075 | 0.037993 | 0.393344 | -1.34614 |
| Elaidic acid | 20.84 | 253 | 1.62197 | 0.001097 | 3.369196 | 1.752404 |
| Hypoxanthine 2 | 19.1147 | 325 | 2.01796 | 0.000235 | 0.232314 | -2.10585 |
| Alanine 2 | 11.6406 | 102 | 2.39355 | 0.020381 | 4.294856 | 2.10261 |
| Spermidine 1 | 21.2628 | 269 | 2.07336 | 0.011037 | 0.177932 | -2.4906 |
Significant mRNA changes induced in liver of D-galactose group.
| Symbol | Description | ProbeName | p-value | Fold change | Regulation |
|---|---|---|---|---|---|
| Tbx19 | Mus musculus T-box 19 (Tbx19) | A_52_P95930 | 4.54E-04 | 9.761589 | up |
| Hc | Mus musculus hemolytic complement (Hc) | A_51_P155323 | 0.047217 | 2.608894 | up |
| Lepr | Mus musculus leptin receptor (Lepr), transcript variant 2 | A_55_P2177911 | 0.027683 | 2.059761 | up |
| Bhmt | Mus musculus betaine-homocysteine methyltransferase (Bhmt) | A_55_P2105180 | 0.0267 | 5.115597 | up |
| Klk1b26 | Mus musculus kallikrein 1-related petidase b26 (Klk1b26) | A_55_P2001474 | 0.001978 | 2.81843 | down |
| Olfr1211 | Mus musculus olfactory receptor 1211 (Olfr1211) | A_51_P237106 | 0.0418 | 2.02142 | up |
| Dusp6 | Mus musculus dual specificity phosphatase 6 (Dusp6) | A_51_P502614 | 0.028695 | 2.087547 | up |
| Olfr1408 | Mus musculus olfactory receptor 1408 (Olfr1408) | A_55_P2164683 | 0.005581 | 2.530703 | down |
| Ube2l6 | Mus musculus ubiquitin-conjugating enzyme E2L 6 (Ube2l6) | A_55_P2031125 | 0.036739 | 2.236952 | down |
| Ascl4 | Mus musculus achaete-scute complex homolog 4 (Drosophila) (Ascl4) | A_55_P1993148 | 0.025012 | 5.178002 | up |
| Bcl6 | Mus musculus B cell leukemia/lymphoma 6 (Bcl6) | A_52_P161495 | 2.16E-04 | 2.146329 | up |
| Bivm | Mus musculus basic, immunoglobulin-like variable motif containing (Bivm) | A_55_P2170109 | 0.011495 | 2.046546 | up |
| Cyp2r1 | Mus musculus cytochrome P450, family 2, subfamily r, polypeptide 1 (Cyp2r1) | A_55_P1966755 | 0.041499 | 2.40151 | down |
| Jag1 | Mus musculus jagged 1 (Jag1) | A_52_P634090 | 0.04412 | 2.077494 | down |
| Atp6v0d2 | Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D2 (Atp6v0d2) | A_66_P124179 | 0.025687 | 2.154945 | up |
| Mfsd2a | Mus musculus major facilitator superfamily domain containing 2A (Mfsd2a) | A_51_P279437 | 0.017035 | 2.116091 | down |
| Bhmt | Mus musculus betaine-homocysteine methyltransferase (Bhmt) | A_55_P2105181 | 0.033883 | 4.284998 | up |
| Agk | Mus musculus acylglycerol kinase (Agk), nuclear gene encoding mitochondrial protein | A_55_P2063163 | 0.005518 | 3.043666 | up |
| Tmtc3 | Mus musculus transmembrane and tetratricopeptide repeat containing 3 (Tmtc3), transcript variant 2 | A_51_P212473 | 0.005088 | 2.04044 | up |
| Glo1 | Mus musculus glyoxalase 1 (Glo1), transcript variant 1 | A_51_P480982 | 0.049039 | 2.045152 | down |
Independent validation by real-time PCR of 6 genes significantly altered in the liver of D-galactose mice.
| Gene | RT-PCR | Affymetrix | ||
|---|---|---|---|---|
| Fold change | P value | Fold change | P value | |
| betaine-homocysteine methyltransferase (Bhmt) | 3.588 | <0.05 | 5.116 | <0.05 |
| T-box 19 (Tbx19) | 7.007 | <0.05 | 9.762 | <0.01 |
| cytochrome P450, family 2, subfamily r, polypeptide 1 (Cyp2r1) | 2.271 | <0.05 | 2.402 | <0.05 |
| jagged 1 (Jag1) | 1.835 | <0.05 | 2.077 | <0.05 |
| major facilitator superfamily domain containing 2A (Mfsd2a) | 2.026 | <0.05 | 2.116 | <0.05 |
| acylglycerol kinase (Agk) | 2.815 | <0.01 | 3.044 | <0.05 |
| glyoxalase 1 (Glo1) | 2.075 | <0.01 | 2.045 | <0.05 |