Literature DB >> 26150098

G4-associated human diseases.

Nancy Maizels1.   

Abstract

Recent research has established clear connections between G-quadruplexes and human disease. Features of quadruplex structures that promote genomic instability have been determined. Quadruplexes have been identified as transcriptional, translational and epigenetic regulatory targets of factors associated with human genetic disease. An expandable GGGGCC motif that can adopt a G4 structure, located in the previously obscure C9ORF72 locus, has been shown to contribute to two well-recognized neurodegenerative diseases, amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). This review focuses on these advances, which further dispel the view that genomic biology is limited to the confines of the canonical B-form DNA duplex, and show how quadruplexes contribute spatial and temporal dimensionalities to linear sequence information. This recent progress also has clear practical ramifications, as prevention, diagnosis, and treatment of disease depend on understanding the underlying mechanisms.
© 2015 The Author.

Entities:  

Keywords:  ALS; FTD; G4; helicase; quadruplex

Mesh:

Substances:

Year:  2015        PMID: 26150098      PMCID: PMC4552485          DOI: 10.15252/embr.201540607

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  98 in total

1.  Helix formation by guanylic acid.

Authors:  M GELLERT; M N LIPSETT; D R DAVIES
Journal:  Proc Natl Acad Sci U S A       Date:  1962-12-15       Impact factor: 11.205

2.  The Bloom's syndrome helicase unwinds G4 DNA.

Authors:  H Sun; J K Karow; I D Hickson; N Maizels
Journal:  J Biol Chem       Date:  1998-10-16       Impact factor: 5.157

3.  Structure of long human telomeric RNA (TERRA): G-quadruplexes formed by four and eight UUAGGG repeats are stable building blocks.

Authors:  Herry Martadinata; Brahim Heddi; Kah Wai Lim; Anh Tuân Phan
Journal:  Biochemistry       Date:  2011-06-30       Impact factor: 3.162

4.  ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.

Authors:  Lee H Wong; James D McGhie; Marcus Sim; Melissa A Anderson; Soyeon Ahn; Ross D Hannan; Amee J George; Kylie A Morgan; Jeffrey R Mann; K H Andy Choo
Journal:  Genome Res       Date:  2010-01-28       Impact factor: 9.043

5.  High affinity interactions of nucleolin with G-G-paired rDNA.

Authors:  L A Hanakahi; H Sun; N Maizels
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

Review 6.  Human telomeric G-quadruplex: structures of DNA and RNA sequences.

Authors:  Anh Tuân Phan
Journal:  FEBS J       Date:  2009-11-27       Impact factor: 5.542

7.  Genetic instability triggered by G-quadruplex interacting Phen-DC compounds in Saccharomyces cerevisiae.

Authors:  Aurèle Piazza; Jean-Baptiste Boulé; Judith Lopes; Katie Mingo; Eric Largy; Marie-Paule Teulade-Fichou; Alain Nicolas
Journal:  Nucleic Acids Res       Date:  2010-03-11       Impact factor: 16.971

8.  ATR-X syndrome protein targets tandem repeats and influences allele-specific expression in a size-dependent manner.

Authors:  Martin J Law; Karen M Lower; Hsiao P J Voon; Jim R Hughes; David Garrick; Vip Viprakasit; Matthew Mitson; Marco De Gobbi; Marco Marra; Andrew Morris; Aaron Abbott; Steven P Wilder; Stephen Taylor; Guilherme M Santos; Joe Cross; Helena Ayyub; Steven Jones; Jiannis Ragoussis; Daniela Rhodes; Ian Dunham; Douglas R Higgs; Richard J Gibbons
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

9.  Role of the amino terminal RHAU-specific motif in the recognition and resolution of guanine quadruplex-RNA by the DEAH-box RNA helicase RHAU.

Authors:  Simon Lattmann; Banabihari Giri; James P Vaughn; Steven A Akman; Yoshikuni Nagamine
Journal:  Nucleic Acids Res       Date:  2010-05-14       Impact factor: 16.971

10.  G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae.

Authors:  John A Capra; Katrin Paeschke; Mona Singh; Virginia A Zakian
Journal:  PLoS Comput Biol       Date:  2010-07-22       Impact factor: 4.475

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  99 in total

1.  Molecular architecture of G-quadruplex structures generated on duplex Rif1-binding sequences.

Authors:  Hisao Masai; Naoko Kakusho; Rino Fukatsu; Yue Ma; Keisuke Iida; Yutaka Kanoh; Kazuo Nagasawa
Journal:  J Biol Chem       Date:  2018-09-14       Impact factor: 5.157

Review 2.  The impact of replication stress on replication dynamics and DNA damage in vertebrate cells.

Authors:  Hervé Técher; Stéphane Koundrioukoff; Alain Nicolas; Michelle Debatisse
Journal:  Nat Rev Genet       Date:  2017-07-17       Impact factor: 53.242

3.  A biochemical and biophysical model of G-quadruplex DNA recognition by positive coactivator of transcription 4.

Authors:  Wezley C Griffin; Jun Gao; Alicia K Byrd; Shubeena Chib; Kevin D Raney
Journal:  J Biol Chem       Date:  2017-04-17       Impact factor: 5.157

4.  Transcriptional control by G-quadruplexes: In vivo roles and perspectives for specific intervention.

Authors:  Pablo Armas; Aldana David; Nora B Calcaterra
Journal:  Transcription       Date:  2016-10-03

5.  Pif1 helicase unfolding of G-quadruplex DNA is highly dependent on sequence and reaction conditions.

Authors:  Alicia K Byrd; Matthew R Bell; Kevin D Raney
Journal:  J Biol Chem       Date:  2018-09-26       Impact factor: 5.157

6.  G-Quadruplex and Protein Binding by Single-Molecule FRET Microscopy.

Authors:  Chun-Ying Lee; Christina McNerney; Sua Myong
Journal:  Methods Mol Biol       Date:  2019

7.  G-quadruplex structures mark human regulatory chromatin.

Authors:  Robert Hänsel-Hertsch; Dario Beraldi; Stefanie V Lensing; Giovanni Marsico; Katherine Zyner; Aled Parry; Marco Di Antonio; Jeremy Pike; Hiroshi Kimura; Masashi Narita; David Tannahill; Shankar Balasubramanian
Journal:  Nat Genet       Date:  2016-09-12       Impact factor: 38.330

8.  Identification of DHX36 as a tumour suppressor through modulating the activities of the stress-associated proteins and cyclin-dependent kinases in breast cancer.

Authors:  Yinduo Zeng; Tao Qin; Valentina Flamini; Cui Tan; Xinke Zhang; Yizi Cong; Emily Birkin; Wen G Jiang; Herui Yao; Yuxin Cui
Journal:  Am J Cancer Res       Date:  2020-12-01       Impact factor: 6.166

9.  Regulation of autophagy by DNA G-quadruplexes.

Authors:  Pauline Lejault; Jose F Moruno-Manchon; Sree M Vemu; Pedram Honarpisheh; Liang Zhu; Nayun Kim; Akihiko Urayama; David Monchaud; Louise D McCullough; Andrey S Tsvetkov
Journal:  Autophagy       Date:  2020-06-10       Impact factor: 16.016

Review 10.  Sub1/PC4, a multifaceted factor: from transcription to genome stability.

Authors:  Miguel Garavís; Olga Calvo
Journal:  Curr Genet       Date:  2017-05-31       Impact factor: 3.886

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